RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 USP5P45974 858 aa24.18■■□□□ 1.46
SMCO4-203ENST00000526869 CCDC83Q8IWF9 413 aa24.18■■□□□ 1.46
SMCO4-203ENST00000526869 GTF3C6Q969F1 213 aa24.18■■□□□ 1.46
SMCO4-203ENST00000526869 FOCADQ5VW36 1801 aa24.18■■□□□ 1.46
SMCO4-203ENST00000526869 ROBO3Q96MS0 1386 aa24.17■■□□□ 1.46
SMCO4-203ENST00000526869 MINDY4BA8MYZ0 360 aa24.17■■□□□ 1.46
SMCO4-203ENST00000526869 B4E1Z4 1266 aa24.17■■□□□ 1.46
SMCO4-203ENST00000526869 USP17L12C9JPN9 530 aa24.17■■□□□ 1.46
SMCO4-203ENST00000526869 USP17L21D6R901 530 aa24.17■■□□□ 1.46
SMCO4-203ENST00000526869 PFKFB2O60825 505 aa24.17■■□□□ 1.46
SMCO4-203ENST00000526869 RHBDL3P58872 404 aa24.17■■□□□ 1.46
SMCO4-203ENST00000526869 ST3GAL1Q11201 340 aa24.17■■□□□ 1.46
SMCO4-203ENST00000526869 CYB5R4Q7L1T6 521 aa24.17■■□□□ 1.46
SMCO4-203ENST00000526869 LRRC2Q9BYS8 371 aa24.17■■□□□ 1.46
SMCO4-203ENST00000526869 TACC3Q9Y6A5 838 aa24.17■■□□□ 1.46
SMCO4-203ENST00000526869 ORC4O43929 436 aa24.16■■□□□ 1.46
SMCO4-203ENST00000526869 AMOTL1Q8IY63 956 aa24.16■■□□□ 1.46
SMCO4-203ENST00000526869 TEX11Q8IYF3 940 aa24.16■■□□□ 1.46
SMCO4-203ENST00000526869 TEKT1Q969V4 418 aa24.16■■□□□ 1.46
SMCO4-203ENST00000526869 ANGEL1Q9UNK9 670 aaKnown RBP24.16■■□□□ 1.46
SMCO4-203ENST00000526869 SMC3Q9UQE7 1217 aa24.16■■□□□ 1.46
SMCO4-203ENST00000526869 MYO3BQ8WXR4 1341 aa24.15■■□□□ 1.46
SMCO4-203ENST00000526869 SH2B2O14492 632 aaPredicted RBP24.15■■□□□ 1.46
SMCO4-203ENST00000526869 APOBRQ0VD83 1088 aa24.15■■□□□ 1.46
SMCO4-203ENST00000526869 CHST3Q7LGC8 479 aa24.15■■□□□ 1.46
SMCO4-203ENST00000526869 ESR2Q92731 530 aa24.15■■□□□ 1.46
SMCO4-203ENST00000526869 LLPHQ9BRT6 129 aaKnown RBP24.15■■□□□ 1.46
SMCO4-203ENST00000526869 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.15■■□□□ 1.46
SMCO4-203ENST00000526869 KDM4AO75164 1064 aa24.14■■□□□ 1.45
SMCO4-203ENST00000526869 PDIA4P13667 645 aaKnown RBP24.14■■□□□ 1.45
SMCO4-203ENST00000526869 C12orf60Q5U649 245 aa24.14■■□□□ 1.45
SMCO4-203ENST00000526869 LARGE2Q8N3Y3 721 aa24.14■■□□□ 1.45
SMCO4-203ENST00000526869 NECAB1Q8N987 351 aa24.14■■□□□ 1.45
SMCO4-203ENST00000526869 MXD3Q9BW11 206 aa24.14■■□□□ 1.45
SMCO4-203ENST00000526869 KCNQ5Q9NR82 932 aa24.14■■□□□ 1.45
SMCO4-203ENST00000526869 MCM9Q9NXL9 1143 aa24.14■■□□□ 1.45
SMCO4-203ENST00000526869 LTBP3Q9NS15 1303 aa24.13■■□□□ 1.45
SMCO4-203ENST00000526869 ARFGEF1Q9Y6D6 1849 aa24.13■■□□□ 1.45
SMCO4-203ENST00000526869 YDJCA8MPS7 323 aa24.13■■□□□ 1.45
SMCO4-203ENST00000526869 IARSP41252 1262 aaKnown RBP24.13■■□□□ 1.45
SMCO4-203ENST00000526869 LIFRP42702 1097 aa24.13■■□□□ 1.45
SMCO4-203ENST00000526869 SART3Q15020 963 aaKnown RBP24.13■■□□□ 1.45
SMCO4-203ENST00000526869 SGMS1Q86VZ5 419 aa24.13■■□□□ 1.45
SMCO4-203ENST00000526869 ZDHHC15Q96MV8 337 aa24.13■■□□□ 1.45
SMCO4-203ENST00000526869 SPON1Q9HCB6 807 aa24.13■■□□□ 1.45
SMCO4-203ENST00000526869 ZSWIM5Q9P217 1185 aa24.13■■□□□ 1.45
SMCO4-203ENST00000526869 CYP2D7A0A087X1C5 515 aa24.12■■□□□ 1.45
SMCO4-203ENST00000526869 PDIA3P30101 505 aaKnown RBP24.12■■□□□ 1.45
SMCO4-203ENST00000526869 CRKP46108 304 aa24.12■■□□□ 1.45
SMCO4-203ENST00000526869 IGDCC4Q8TDY8 1250 aa24.12■■□□□ 1.45
SMCO4-203ENST00000526869 TGFBRAP1Q8WUH2 860 aa24.12■■□□□ 1.45
SMCO4-203ENST00000526869 TAOK3Q9H2K8 898 aa24.12■■□□□ 1.45
SMCO4-203ENST00000526869 ZNF277Q9NRM2 450 aaPredicted RBP24.12■■□□□ 1.45
SMCO4-203ENST00000526869 PPP1R1BQ9UD71 204 aaPredicted RBP24.12■■□□□ 1.45
SMCO4-203ENST00000526869 SERPINA10Q9UK55 444 aa24.12■■□□□ 1.45
SMCO4-203ENST00000526869 COL4A5P29400 1685 aa24.11■■□□□ 1.45
SMCO4-203ENST00000526869 FLT1P17948 1338 aa24.11■■□□□ 1.45
SMCO4-203ENST00000526869 F8W031 263 aaPredicted RBP24.11■■□□□ 1.45
SMCO4-203ENST00000526869 PDE4BQ07343 736 aa24.11■■□□□ 1.45
SMCO4-203ENST00000526869 NFKBIBQ15653 356 aa24.11■■□□□ 1.45
SMCO4-203ENST00000526869 CLEC17AQ6ZS10 378 aa24.11■■□□□ 1.45
SMCO4-203ENST00000526869 INCENPQ9NQS7 918 aa24.11■■□□□ 1.45
SMCO4-203ENST00000526869 KLF18A0A0U1RQI7 1052 aa24.1■■□□□ 1.45
SMCO4-203ENST00000526869 USP17L8P0C7I0 530 aa24.1■■□□□ 1.45
SMCO4-203ENST00000526869 STK3Q13188 491 aa24.1■■□□□ 1.45
SMCO4-203ENST00000526869 TMEM67Q5HYA8 995 aa24.1■■□□□ 1.45
SMCO4-203ENST00000526869 NIM1KQ8IY84 436 aa24.1■■□□□ 1.45
SMCO4-203ENST00000526869 TMTC2Q8N394 836 aa24.1■■□□□ 1.45
SMCO4-203ENST00000526869 NKX2-3Q8TAU0 364 aa24.1■■□□□ 1.45
SMCO4-203ENST00000526869 TNPO1Q92973 898 aaKnown RBP24.1■■□□□ 1.45
SMCO4-203ENST00000526869 LY9Q9HBG7 655 aa24.1■■□□□ 1.45
SMCO4-203ENST00000526869 GPHNQ9NQX3 736 aaPredicted RBP24.1■■□□□ 1.45
SMCO4-203ENST00000526869 TOMM22Q9NS69 142 aa24.1■■□□□ 1.45
SMCO4-203ENST00000526869 ZNRF3Q9ULT6 936 aa24.1■■□□□ 1.45
SMCO4-203ENST00000526869 ECM29Q5VYK3 1845 aa24.1■■□□□ 1.45
SMCO4-203ENST00000526869 ADAMTSL1Q8N6G6 1762 aa24.09■■□□□ 1.45
SMCO4-203ENST00000526869 IFIT3O14879 490 aaKnown RBP24.09■■□□□ 1.45
SMCO4-203ENST00000526869 BRD1O95696 1058 aa24.09■■□□□ 1.45
SMCO4-203ENST00000526869 VIL1P09327 827 aaKnown RBP24.09■■□□□ 1.45
SMCO4-203ENST00000526869 CYP2D6P10635 497 aa24.09■■□□□ 1.45
SMCO4-203ENST00000526869 GJB2P29033 226 aa24.09■■□□□ 1.45
SMCO4-203ENST00000526869 SCNN1DP51172 638 aa24.09■■□□□ 1.45
SMCO4-203ENST00000526869 SCRN1Q12765 414 aa24.09■■□□□ 1.45
SMCO4-203ENST00000526869 RRP12Q5JTH9 1297 aaKnown RBP24.09■■□□□ 1.45
SMCO4-203ENST00000526869 APOBEC3HQ6NTF7 200 aaKnown RBP24.09■■□□□ 1.45
SMCO4-203ENST00000526869 RSBN1LQ6PCB5 846 aaPredicted RBP24.09■■□□□ 1.45
SMCO4-203ENST00000526869 KIAA0825Q8IV33 1275 aa24.09■■□□□ 1.45
SMCO4-203ENST00000526869 MAPKAPK5Q8IW41 473 aa24.09■■□□□ 1.45
SMCO4-203ENST00000526869 BRPF3Q9ULD4 1205 aa24.09■■□□□ 1.45
SMCO4-203ENST00000526869 WDR33Q9C0J8 1336 aaKnown RBP24.09■■□□□ 1.45
SMCO4-203ENST00000526869 NID2Q14112 1375 aa24.08■■□□□ 1.45
SMCO4-203ENST00000526869 ERICH2A1L162 156 aa24.08■■□□□ 1.45
SMCO4-203ENST00000526869 DHX16O60231 1041 aaKnown RBP24.08■■□□□ 1.45
SMCO4-203ENST00000526869 PDCP20941 246 aa24.08■■□□□ 1.45
SMCO4-203ENST00000526869 RCAN1P53805 252 aa24.08■■□□□ 1.45
SMCO4-203ENST00000526869 KLHL34Q8N239 644 aa24.08■■□□□ 1.45
SMCO4-203ENST00000526869 SMARCC2Q8TAQ2 1214 aa24.08■■□□□ 1.45
SMCO4-203ENST00000526869 ZNF287Q9HBT7 754 aa24.08■■□□□ 1.45
SMCO4-203ENST00000526869 MYH1P12882 1939 aa24.08■■□□□ 1.44
SMCO4-203ENST00000526869 GOLGA8BA8MQT2 603 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 742.1 ms