RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 HNRNPUQ00839 825 aaKnown RBP eCLIP7.18□□□□□ -1.26
CSDE1-211ENST00000525970 ATP2B2Q01814 1243 aa7.18□□□□□ -1.26
CSDE1-211ENST00000525970 CYP27C1Q4G0S4 372 aa7.18□□□□□ -1.26
CSDE1-211ENST00000525970 PRPF40BQ6NWY9 871 aaKnown RBP7.18□□□□□ -1.26
CSDE1-211ENST00000525970 POU5F2Q8N7G0 328 aa7.18□□□□□ -1.26
CSDE1-211ENST00000525970 WDR18Q9BV38 432 aa7.18□□□□□ -1.26
CSDE1-211ENST00000525970 PPP4R2Q9NY27 417 aa7.18□□□□□ -1.26
CSDE1-211ENST00000525970 SLC5A6Q9Y289 635 aa7.18□□□□□ -1.26
CSDE1-211ENST00000525970 ECEL1O95672 775 aa7.17□□□□□ -1.26
CSDE1-211ENST00000525970 PDE3AQ14432 1141 aa7.17□□□□□ -1.26
CSDE1-211ENST00000525970 TSNAXIP1Q2TAA8 658 aa7.17□□□□□ -1.26
CSDE1-211ENST00000525970 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.17□□□□□ -1.26
CSDE1-211ENST00000525970 PI16Q6UXB8 463 aa7.17□□□□□ -1.26
CSDE1-211ENST00000525970 MISP3Q96FF7 219 aa7.17□□□□□ -1.26
CSDE1-211ENST00000525970 WWC3Q9ULE0 1092 aa7.17□□□□□ -1.26
CSDE1-211ENST00000525970 TRAK1Q9UPV9 953 aa7.17□□□□□ -1.26
CSDE1-211ENST00000525970 DAGLAQ9Y4D2 1042 aa7.17□□□□□ -1.26
CSDE1-211ENST00000525970 LDHBP07195 334 aaKnown RBP7.16□□□□□ -1.26
CSDE1-211ENST00000525970 GRM2Q14416 872 aa7.16□□□□□ -1.26
CSDE1-211ENST00000525970 ALG1LQ6GMV1 187 aa7.16□□□□□ -1.26
CSDE1-211ENST00000525970 BCL7CQ8WUZ0 217 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-211ENST00000525970 SREK1Q8WXA9 508 aaKnown RBP7.16□□□□□ -1.26
CSDE1-211ENST00000525970 SETDB2Q96T68 719 aa7.16□□□□□ -1.26
CSDE1-211ENST00000525970 ABCB6Q9NP58 842 aa7.16□□□□□ -1.26
CSDE1-211ENST00000525970 PRPF40AO75400 957 aaKnown RBP7.15□□□□□ -1.26
CSDE1-211ENST00000525970 HDLBPQ00341 1268 aaKnown RBP7.15□□□□□ -1.26
CSDE1-211ENST00000525970 ATXN3LQ9H3M9 355 aa7.15□□□□□ -1.26
CSDE1-211ENST00000525970 PPP1R9AQ9ULJ8 1098 aa7.15□□□□□ -1.26
CSDE1-211ENST00000525970 TMEM238LA0A1B0GVL6 79 aa7.14□□□□□ -1.27
CSDE1-211ENST00000525970 SCAMP3O14828 347 aaKnown RBP7.14□□□□□ -1.27
CSDE1-211ENST00000525970 TMPRSS2O15393 492 aa7.14□□□□□ -1.27
CSDE1-211ENST00000525970 DYNC1LI2O43237 492 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-211ENST00000525970 SLFN14P0C7P3 912 aa7.14□□□□□ -1.27
CSDE1-211ENST00000525970 FGD1P98174 961 aa7.14□□□□□ -1.27
CSDE1-211ENST00000525970 TMC4Q7Z404 712 aa7.14□□□□□ -1.27
CSDE1-211ENST00000525970 FBF1Q8TES7 1133 aa7.14□□□□□ -1.27
CSDE1-211ENST00000525970 DRC1Q96MC2 740 aa7.14□□□□□ -1.27
CSDE1-211ENST00000525970 BCO2Q9BYV7 579 aa7.14□□□□□ -1.27
CSDE1-211ENST00000525970 BCL11AQ9H165 835 aa7.14□□□□□ -1.27
CSDE1-211ENST00000525970 KRT82Q9NSB4 513 aa7.14□□□□□ -1.27
CSDE1-211ENST00000525970 CRIM1Q9NZV1 1036 aa7.14□□□□□ -1.27
CSDE1-211ENST00000525970 BIN1O00499 593 aa7.13□□□□□ -1.27
CSDE1-211ENST00000525970 FCGRTP55899 365 aa7.13□□□□□ -1.27
CSDE1-211ENST00000525970 DAB2P98082 770 aa7.13□□□□□ -1.27
CSDE1-211ENST00000525970 RAD51AP2Q09MP3 1159 aa7.13□□□□□ -1.27
CSDE1-211ENST00000525970 NXPE4Q6UWF7 544 aa7.13□□□□□ -1.27
CSDE1-211ENST00000525970 DTHD1Q6ZMT9 781 aa7.13□□□□□ -1.27
CSDE1-211ENST00000525970 METTL16Q86W50 562 aaKnown RBP7.13□□□□□ -1.27
CSDE1-211ENST00000525970 PIDD1Q9HB75 910 aa7.13□□□□□ -1.27
CSDE1-211ENST00000525970 RNF19AQ9NV58 838 aa7.13□□□□□ -1.27
CSDE1-211ENST00000525970 PARP2Q9UGN5 583 aa7.13□□□□□ -1.27
CSDE1-211ENST00000525970 C8AP07357 584 aa7.12□□□□□ -1.27
CSDE1-211ENST00000525970 JAG1P78504 1218 aa7.12□□□□□ -1.27
CSDE1-211ENST00000525970 ID3Q02535 119 aa7.12□□□□□ -1.27
CSDE1-211ENST00000525970 PLCL1Q15111 1095 aa7.12□□□□□ -1.27
CSDE1-211ENST00000525970 KIF4BQ2VIQ3 1234 aa7.12□□□□□ -1.27
CSDE1-211ENST00000525970 NAALADL2Q58DX5 795 aa7.12□□□□□ -1.27
CSDE1-211ENST00000525970 WFDC3Q8IUB2 231 aa7.12□□□□□ -1.27
CSDE1-211ENST00000525970 GLIS3Q8NEA6 775 aa7.12□□□□□ -1.27
CSDE1-211ENST00000525970 NETO1Q8TDF5 533 aa7.12□□□□□ -1.27
CSDE1-211ENST00000525970 DUSP9Q99956 384 aaKnown RBP7.12□□□□□ -1.27
CSDE1-211ENST00000525970 CCDC86Q9H6F5 360 aaKnown RBP7.12□□□□□ -1.27
CSDE1-211ENST00000525970 SPG7Q9UQ90 795 aa7.12□□□□□ -1.27
CSDE1-211ENST00000525970 ARID1BQ8NFD5 2236 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-211ENST00000525970 PAPLNO95428 1278 aa7.11□□□□□ -1.27
CSDE1-211ENST00000525970 LIG1P18858 919 aa7.11□□□□□ -1.27
CSDE1-211ENST00000525970 ZNF792Q3KQV3 632 aa7.11□□□□□ -1.27
CSDE1-211ENST00000525970 FANCD2OSQ96PS1 177 aa7.11□□□□□ -1.27
CSDE1-211ENST00000525970 MKNK2Q9HBH9 465 aa7.11□□□□□ -1.27
CSDE1-211ENST00000525970 AKAP2Q9Y2D5 859 aa7.11□□□□□ -1.27
CSDE1-211ENST00000525970 GSTP1P09211 210 aaKnown RBP7.1□□□□□ -1.27
CSDE1-211ENST00000525970 FAM87AP0C7U9 286 aa7.1□□□□□ -1.27
CSDE1-211ENST00000525970 ERCC5P28715 1186 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-211ENST00000525970 ZNF574Q6ZN55 896 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-211ENST00000525970 SPRED2Q7Z698 418 aa7.1□□□□□ -1.27
CSDE1-211ENST00000525970 SMYD4Q8IYR2 804 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-211ENST00000525970 FAM161BQ96MY7 647 aa7.1□□□□□ -1.27
CSDE1-211ENST00000525970 LGR6Q9HBX8 967 aa7.1□□□□□ -1.27
CSDE1-211ENST00000525970 GIPC1O14908 333 aa7.09□□□□□ -1.27
CSDE1-211ENST00000525970 ZNF862O60290 1169 aa7.09□□□□□ -1.27
CSDE1-211ENST00000525970 FUT4P22083 530 aa7.09□□□□□ -1.27
CSDE1-211ENST00000525970 ZNF157P51786 506 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-211ENST00000525970 XPCQ01831 940 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-211ENST00000525970 PPP2R3AQ06190 1150 aa7.09□□□□□ -1.27
CSDE1-211ENST00000525970 FAAP100Q0VG06 881 aa7.09□□□□□ -1.27
CSDE1-211ENST00000525970 CDK5R2Q13319 367 aa7.09□□□□□ -1.27
CSDE1-211ENST00000525970 WDR89Q96FK6 387 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-211ENST00000525970 OSBPL7Q9BZF2 842 aa7.09□□□□□ -1.27
CSDE1-211ENST00000525970 DISC1Q9NRI5 854 aa7.09□□□□□ -1.27
CSDE1-211ENST00000525970 METTL5Q9NRN9 209 aaKnown RBP7.09□□□□□ -1.27
CSDE1-211ENST00000525970 VAV3Q9UKW4 847 aa7.09□□□□□ -1.27
CSDE1-211ENST00000525970 PCDHGC5Q9Y5F6 944 aa7.09□□□□□ -1.27
CSDE1-211ENST00000525970 SORBS3O60504 671 aa7.08□□□□□ -1.28
CSDE1-211ENST00000525970 XRCC5P13010 732 aaKnown RBP7.08□□□□□ -1.28
CSDE1-211ENST00000525970 FANCCQ00597 558 aa7.08□□□□□ -1.28
CSDE1-211ENST00000525970 PRKCQQ04759 706 aa7.08□□□□□ -1.28
CSDE1-211ENST00000525970 LCE1DQ5T752 114 aa7.08□□□□□ -1.28
CSDE1-211ENST00000525970 C9orf131Q5VYM1 1079 aa7.08□□□□□ -1.28
CSDE1-211ENST00000525970 ATG4DQ86TL0 474 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-211ENST00000525970 PLD6Q8N2A8 252 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms