RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 ALDH8A1Q9H2A2 487 aaPredicted RBP10.35□□□□□ -0.75
PABPC4-220ENST00000525669 SAP30BPQ9UHR5 308 aaKnown RBP10.35□□□□□ -0.75
PABPC4-220ENST00000525669 NAP1L2Q9ULW6 460 aaPredicted RBP10.35□□□□□ -0.75
PABPC4-220ENST00000525669 PCDHAC2Q9Y5I4 1007 aa10.35□□□□□ -0.75
PABPC4-220ENST00000525669 GAKO14976 1311 aa10.34□□□□□ -0.75
PABPC4-220ENST00000525669 GPR75-ASB3A0A0A6YYF3 556 aa10.34□□□□□ -0.75
PABPC4-220ENST00000525669 RAD17O75943 681 aa10.34□□□□□ -0.75
PABPC4-220ENST00000525669 BAG3O95817 575 aa10.34□□□□□ -0.75
PABPC4-220ENST00000525669 MCM5P33992 734 aa10.34□□□□□ -0.75
PABPC4-220ENST00000525669 IARSP41252 1262 aaKnown RBP10.34□□□□□ -0.75
PABPC4-220ENST00000525669 PPP4CP60510 307 aa10.34□□□□□ -0.75
PABPC4-220ENST00000525669 RASSF7Q02833 373 aa10.34□□□□□ -0.75
PABPC4-220ENST00000525669 TRDNQ13061 729 aa10.34□□□□□ -0.75
PABPC4-220ENST00000525669 AKNAD1Q5T1N1 836 aa10.34□□□□□ -0.75
PABPC4-220ENST00000525669 STRIP1Q5VSL9 837 aa10.34□□□□□ -0.75
PABPC4-220ENST00000525669 MFSD6Q6ZSS7 791 aa10.34□□□□□ -0.75
PABPC4-220ENST00000525669 RAB11FIP4Q86YS3 637 aa10.34□□□□□ -0.75
PABPC4-220ENST00000525669 TEX11Q8IYF3 940 aa10.34□□□□□ -0.75
PABPC4-220ENST00000525669 ZSCAN31Q96LW9 406 aaPredicted RBP10.34□□□□□ -0.75
PABPC4-220ENST00000525669 ZKSCAN3Q9BRR0 538 aa10.34□□□□□ -0.75
PABPC4-220ENST00000525669 SPON1Q9HCB6 807 aa10.34□□□□□ -0.75
PABPC4-220ENST00000525669 MCM9Q9NXL9 1143 aa10.34□□□□□ -0.75
PABPC4-220ENST00000525669 CHMP5Q9NZZ3 219 aa10.34□□□□□ -0.75
PABPC4-220ENST00000525669 KDM4AO75164 1064 aa10.33□□□□□ -0.76
PABPC4-220ENST00000525669 PRDM1O75626 825 aa10.33□□□□□ -0.76
PABPC4-220ENST00000525669 RBM5P52756 815 aaKnown RBP eCLIP10.33□□□□□ -0.76
PABPC4-220ENST00000525669 RHBDL3P58872 404 aa10.33□□□□□ -0.76
PABPC4-220ENST00000525669 PICALMQ13492 652 aa10.33□□□□□ -0.76
PABPC4-220ENST00000525669 ANKRD1Q15327 319 aa10.33□□□□□ -0.76
PABPC4-220ENST00000525669 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
PABPC4-220ENST00000525669 SOGA3Q5TF21 947 aa10.33□□□□□ -0.76
PABPC4-220ENST00000525669 TMED8Q6PL24 325 aaPredicted RBP10.33□□□□□ -0.76
PABPC4-220ENST00000525669 SLF2Q8IX21 1173 aa10.33□□□□□ -0.76
PABPC4-220ENST00000525669 STAG1Q8WVM7 1258 aa10.33□□□□□ -0.76
PABPC4-220ENST00000525669 SENP2Q9HC62 589 aa10.33□□□□□ -0.76
PABPC4-220ENST00000525669 ATP8A2Q9NTI2 1148 aa10.33□□□□□ -0.76
PABPC4-220ENST00000525669 BRPF3Q9ULD4 1205 aa10.33□□□□□ -0.76
PABPC4-220ENST00000525669 SIPA1L1O43166 1804 aa10.33□□□□□ -0.76
PABPC4-220ENST00000525669 NFKBIEO00221 500 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 PSMD14O00487 310 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 CRKP46108 304 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 CCT2P78371 535 aaKnown RBP10.32□□□□□ -0.76
PABPC4-220ENST00000525669 PKP1Q13835 747 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 NBR1Q14596 966 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 FOXD4L5Q5VV16 416 aaPredicted RBP10.32□□□□□ -0.76
PABPC4-220ENST00000525669 GIMAP6Q6P9H5 292 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 NIM1KQ8IY84 436 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 IL27Q8NEV9 243 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 FOXD4L4Q8WXT5 416 aaPredicted RBP10.32□□□□□ -0.76
PABPC4-220ENST00000525669 TEKT1Q969V4 418 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 DYNLL2Q96FJ2 89 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 FAM163AQ96GL9 167 aaPredicted RBP10.32□□□□□ -0.76
PABPC4-220ENST00000525669 KRT23Q9C075 422 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 FHDC1Q9C0D6 1143 aaPredicted RBP10.32□□□□□ -0.76
PABPC4-220ENST00000525669 TAOK3Q9H2K8 898 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 SH2B1Q9NRF2 756 aaPredicted RBP10.32□□□□□ -0.76
PABPC4-220ENST00000525669 USP40Q9NVE5 1235 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 ZSWIM5Q9P217 1185 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 MKRN1Q9UHC7 482 aaKnown RBP10.32□□□□□ -0.76
PABPC4-220ENST00000525669 ANAPC4Q9UJX5 808 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 SUGT1Q9Y2Z0 365 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 DICER1Q9UPY3 1922 aaKnown RBP10.32□□□□□ -0.76
PABPC4-220ENST00000525669 SBF1O95248 1867 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 FLT1P17948 1338 aa10.32□□□□□ -0.76
PABPC4-220ENST00000525669 KLF18A0A0U1RQI7 1052 aa10.31□□□□□ -0.76
PABPC4-220ENST00000525669 IGSF3O75054 1194 aa10.31□□□□□ -0.76
PABPC4-220ENST00000525669 POLR3DP05423 398 aaPredicted RBP10.31□□□□□ -0.76
PABPC4-220ENST00000525669 PLCG2P16885 1265 aa10.31□□□□□ -0.76
PABPC4-220ENST00000525669 PRELPP51888 382 aa10.31□□□□□ -0.76
PABPC4-220ENST00000525669 CACNB3P54284 484 aa10.31□□□□□ -0.76
PABPC4-220ENST00000525669 FKBP1AP62942 108 aaKnown RBP10.31□□□□□ -0.76
PABPC4-220ENST00000525669 SBK1Q52WX2 424 aa10.31□□□□□ -0.76
PABPC4-220ENST00000525669 CDC42EP5Q6NZY7 148 aa10.31□□□□□ -0.76
PABPC4-220ENST00000525669 INTS4Q96HW7 963 aaKnown RBP10.31□□□□□ -0.76
PABPC4-220ENST00000525669 AGXT2Q9BYV1 514 aa10.31□□□□□ -0.76
PABPC4-220ENST00000525669 CNNM2Q9H8M5 875 aa10.31□□□□□ -0.76
PABPC4-220ENST00000525669 NCOA5Q9HCD5 579 aaKnown RBP10.31□□□□□ -0.76
PABPC4-220ENST00000525669 ARPP21Q9UBL0 812 aaPredicted RBP10.31□□□□□ -0.76
PABPC4-220ENST00000525669 ZBTB12Q9Y330 459 aaPredicted RBP10.31□□□□□ -0.76
PABPC4-220ENST00000525669 SH2B2O14492 632 aaPredicted RBP10.3□□□□□ -0.76
PABPC4-220ENST00000525669 IFIT3O14879 490 aaKnown RBP10.3□□□□□ -0.76
PABPC4-220ENST00000525669 RANBP6O60518 1105 aaKnown RBP10.3□□□□□ -0.76
PABPC4-220ENST00000525669 PPFIA3O75145 1194 aa10.3□□□□□ -0.76
PABPC4-220ENST00000525669 GJB2P29033 226 aa10.3□□□□□ -0.76
PABPC4-220ENST00000525669 PDIA3P30101 505 aaKnown RBP10.3□□□□□ -0.76
PABPC4-220ENST00000525669 PLCD1P51178 756 aa10.3□□□□□ -0.76
PABPC4-220ENST00000525669 SCRN1Q12765 414 aa10.3□□□□□ -0.76
PABPC4-220ENST00000525669 TMEM67Q5HYA8 995 aa10.3□□□□□ -0.76
PABPC4-220ENST00000525669 FAM47AQ5JRC9 791 aa10.3□□□□□ -0.76
PABPC4-220ENST00000525669 C12orf60Q5U649 245 aa10.3□□□□□ -0.76
PABPC4-220ENST00000525669 APOBEC3HQ6NTF7 200 aaKnown RBP10.3□□□□□ -0.76
PABPC4-220ENST00000525669 RSBN1LQ6PCB5 846 aaPredicted RBP10.3□□□□□ -0.76
PABPC4-220ENST00000525669 HHIPL2Q6UWX4 724 aa10.3□□□□□ -0.76
PABPC4-220ENST00000525669 IGDCC4Q8TDY8 1250 aa10.3□□□□□ -0.76
PABPC4-220ENST00000525669 RNF41Q9H4P4 317 aaPredicted RBP10.3□□□□□ -0.76
PABPC4-220ENST00000525669 CWC22Q9HCG8 908 aaKnown RBP10.3□□□□□ -0.76
PABPC4-220ENST00000525669 DDX4Q9NQI0 724 aaKnown RBP10.3□□□□□ -0.76
PABPC4-220ENST00000525669 ZNRF3Q9ULT6 936 aa10.3□□□□□ -0.76
PABPC4-220ENST00000525669 SMC3Q9UQE7 1217 aa10.3□□□□□ -0.76
PABPC4-220ENST00000525669 WDR19Q8NEZ3 1342 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms