RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 GJA5P36382 358 aa21.35■■□□□ 1.01
NR1H3-228ENST00000525441 ERO1BQ86YB8 467 aa21.35■■□□□ 1.01
NR1H3-228ENST00000525441 TEX11Q8IYF3 940 aa21.35■■□□□ 1.01
NR1H3-228ENST00000525441 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.35■■□□□ 1.01
NR1H3-228ENST00000525441 LRRCC1Q9C099 1032 aa21.35■■□□□ 1.01
NR1H3-228ENST00000525441 DDX4Q9NQI0 724 aaKnown RBP21.35■■□□□ 1.01
NR1H3-228ENST00000525441 SNCAIPQ9Y6H5 919 aa21.35■■□□□ 1.01
NR1H3-228ENST00000525441 MAST2Q6P0Q8 1798 aa21.35■■□□□ 1.01
NR1H3-228ENST00000525441 SPDYE5A6NIY4 337 aa21.34■■□□□ 1.01
NR1H3-228ENST00000525441 GTF2A2P52657 109 aa21.34■■□□□ 1.01
NR1H3-228ENST00000525441 MAP3K12Q12852 859 aa21.34■■□□□ 1.01
NR1H3-228ENST00000525441 TTF1Q15361 905 aaPredicted RBP21.34■■□□□ 1.01
NR1H3-228ENST00000525441 IFNL1Q8IU54 200 aa21.34■■□□□ 1.01
NR1H3-228ENST00000525441 ZKSCAN4Q969J2 545 aaPredicted RBP21.34■■□□□ 1.01
NR1H3-228ENST00000525441 OTUD5Q96G74 571 aa21.34■■□□□ 1.01
NR1H3-228ENST00000525441 ZNF112Q9UJU3 913 aa21.34■■□□□ 1.01
NR1H3-228ENST00000525441 CYP7A1P22680 504 aa21.33■■□□□ 1.01
NR1H3-228ENST00000525441 PPP4CP60510 307 aa21.33■■□□□ 1.01
NR1H3-228ENST00000525441 CERS3Q8IU89 383 aa21.33■■□□□ 1.01
NR1H3-228ENST00000525441 CFHR5Q9BXR6 569 aa21.33■■□□□ 1.01
NR1H3-228ENST00000525441 AATFQ9NY61 560 aaKnown RBP eCLIP21.33■■□□□ 1.01
NR1H3-228ENST00000525441 CASP8AP2Q9UKL3 1982 aa21.32■■□□□ 1
NR1H3-228ENST00000525441 TESPA1A2RU30 521 aaPredicted RBP21.32■■□□□ 1
NR1H3-228ENST00000525441 DDTLA6NHG4 134 aaPredicted RBP21.32■■□□□ 1
NR1H3-228ENST00000525441 TBC1D8O95759 1140 aa21.32■■□□□ 1
NR1H3-228ENST00000525441 INPP5BP32019 993 aa21.32■■□□□ 1
NR1H3-228ENST00000525441 SH3BP5LQ7L8J4 393 aa21.32■■□□□ 1
NR1H3-228ENST00000525441 SH3RF3Q8TEJ3 882 aaPredicted RBP21.32■■□□□ 1
NR1H3-228ENST00000525441 CNKSR2Q8WXI2 1034 aa21.32■■□□□ 1
NR1H3-228ENST00000525441 DCTPP1Q9H773 170 aa21.32■■□□□ 1
NR1H3-228ENST00000525441 NDUFB9Q9Y6M9 179 aa21.32■■□□□ 1
NR1H3-228ENST00000525441 ATRNL1Q5VV63 1379 aa21.32■■□□□ 1
NR1H3-228ENST00000525441 PPATQ06203 517 aa21.31■■□□□ 1
NR1H3-228ENST00000525441 PPIL2Q13356 520 aa21.31■■□□□ 1
NR1H3-228ENST00000525441 NOM1Q5C9Z4 860 aaKnown RBP21.31■■□□□ 1
NR1H3-228ENST00000525441 NOL9Q5SY16 702 aaKnown RBP21.31■■□□□ 1
NR1H3-228ENST00000525441 OSBPL5Q9H0X9 879 aaPredicted RBP21.31■■□□□ 1
NR1H3-228ENST00000525441 ANTXR1Q9H6X2 564 aa21.31■■□□□ 1
NR1H3-228ENST00000525441 COL2A1P02458 1487 aaPredicted RBP21.31■■□□□ 1
NR1H3-228ENST00000525441 IGF2BP3O00425 579 aaKnown RBP eCLIP21.3■■□□□ 1
NR1H3-228ENST00000525441 MAP3K10Q02779 954 aa21.3■■□□□ 1
NR1H3-228ENST00000525441 ADGRA1Q86SQ6 560 aa21.3■■□□□ 1
NR1H3-228ENST00000525441 MAGEB6Q8N7X4 407 aa21.3■■□□□ 1
NR1H3-228ENST00000525441 MS4A4AQ96JQ5 239 aa21.3■■□□□ 1
NR1H3-228ENST00000525441 DNAJC2Q99543 621 aaKnown RBP21.3■■□□□ 1
NR1H3-228ENST00000525441 DOCK2Q92608 1830 aa21.29■■□□□ 1
NR1H3-228ENST00000525441 LAMB1P07942 1786 aa21.29■■□□□ 1
NR1H3-228ENST00000525441 CCL15-CCL14A0A0B4J2E2 113 aa21.29■■□□□ 1
NR1H3-228ENST00000525441 CETPP11597 493 aa21.29■■□□□ 1
NR1H3-228ENST00000525441 ATP5JP18859 108 aa21.29■■□□□ 1
NR1H3-228ENST00000525441 SNAPC2Q13487 334 aa21.29■■□□□ 1
NR1H3-228ENST00000525441 CCL15Q16663 113 aa21.29■■□□□ 1
NR1H3-228ENST00000525441 DHX36Q9H2U1 1008 aaKnown RBP21.29■■□□□ 1
NR1H3-228ENST00000525441 GPR25O00155 361 aa21.28■■□□□ 1
NR1H3-228ENST00000525441 GOLIM4O00461 696 aa21.28■■□□□ 1
NR1H3-228ENST00000525441 TBC1D12O60347 775 aa21.28■■□□□ 1
NR1H3-228ENST00000525441 TGFBRAP1Q8WUH2 860 aa21.28■■□□□ 1
NR1H3-228ENST00000525441 BRI3BPQ8WY22 251 aa21.28■■□□□ 1
NR1H3-228ENST00000525441 CRBNQ96SW2 442 aa21.28■■□□□ 1
NR1H3-228ENST00000525441 PICK1Q9NRD5 415 aa21.28■■□□□ 1
NR1H3-228ENST00000525441 PCDHB15Q9Y5E8 787 aa21.28■■□□□ 1
NR1H3-228ENST00000525441 PHF20L1A8MW92 1017 aa21.27■■□□□ 1
NR1H3-228ENST00000525441 IRF6O14896 467 aa21.27■■□□□ 1
NR1H3-228ENST00000525441 SMARCA5O60264 1052 aaPredicted RBP21.27■■□□□ 1
NR1H3-228ENST00000525441 DGKZQ13574 1117 aa21.27■■□□□ 1
NR1H3-228ENST00000525441 SCYL3Q8IZE3 742 aa21.27■■□□□ 1
NR1H3-228ENST00000525441 ZNF296Q8WUU4 475 aaPredicted RBP21.27■■□□□ 1
NR1H3-228ENST00000525441 PTPN18Q99952 460 aa21.27■■□□□ 1
NR1H3-228ENST00000525441 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.27■■□□□ 1
NR1H3-228ENST00000525441 MYO5AQ9Y4I1 1855 aaKnown RBP21.26■□□□□ 0.99
NR1H3-228ENST00000525441 CTNND1O60716 968 aaKnown RBP21.26■□□□□ 0.99
NR1H3-228ENST00000525441 MAPKAPK5Q8IW41 473 aa21.26■□□□□ 0.99
NR1H3-228ENST00000525441 MIGA1Q8NAN2 632 aa21.26■□□□□ 0.99
NR1H3-228ENST00000525441 GPATCH3Q96I76 525 aa21.26■□□□□ 0.99
NR1H3-228ENST00000525441 BOLA2Q9H3K6 86 aa21.26■□□□□ 0.99
NR1H3-228ENST00000525441 PAG1Q9NWQ8 432 aa21.26■□□□□ 0.99
NR1H3-228ENST00000525441 PI4KBQ9UBF8 816 aa21.26■□□□□ 0.99
NR1H3-228ENST00000525441 FKTNO75072 461 aa21.25■□□□□ 0.99
NR1H3-228ENST00000525441 CAPN15O75808 1086 aa21.25■□□□□ 0.99
NR1H3-228ENST00000525441 DYNLL1P63167 89 aaKnown RBP21.25■□□□□ 0.99
NR1H3-228ENST00000525441 AAMPQ13685 434 aa21.25■□□□□ 0.99
NR1H3-228ENST00000525441 SLC9C2Q5TAH2 1124 aa21.25■□□□□ 0.99
NR1H3-228ENST00000525441 CTU1Q7Z7A3 348 aaKnown RBP21.25■□□□□ 0.99
NR1H3-228ENST00000525441 ABHD8Q96I13 439 aa21.25■□□□□ 0.99
NR1H3-228ENST00000525441 HAUS7Q99871 368 aa21.25■□□□□ 0.99
NR1H3-228ENST00000525441 MCOLN1Q9GZU1 580 aa21.25■□□□□ 0.99
NR1H3-228ENST00000525441 ZCCHC17Q9NP64 241 aaKnown RBP21.25■□□□□ 0.99
NR1H3-228ENST00000525441 HERC5Q9UII4 1024 aaKnown RBP21.25■□□□□ 0.99
NR1H3-228ENST00000525441 FLT1P17948 1338 aa21.25■□□□□ 0.99
NR1H3-228ENST00000525441 PDE6AP16499 860 aa21.24■□□□□ 0.99
NR1H3-228ENST00000525441 USP5P45974 858 aa21.24■□□□□ 0.99
NR1H3-228ENST00000525441 CRHR2Q13324 411 aa21.24■□□□□ 0.99
NR1H3-228ENST00000525441 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.24■□□□□ 0.99
NR1H3-228ENST00000525441 R3HDMLQ9H3Y0 253 aa21.24■□□□□ 0.99
NR1H3-228ENST00000525441 ECHDC1Q9NTX5 307 aa21.24■□□□□ 0.99
NR1H3-228ENST00000525441 KCNH4Q9UQ05 1017 aa21.24■□□□□ 0.99
NR1H3-228ENST00000525441 HLA-DOAP06340 250 aa21.23■□□□□ 0.99
NR1H3-228ENST00000525441 TAF1CQ15572 869 aaPredicted RBP21.23■□□□□ 0.99
NR1H3-228ENST00000525441 TRIM34Q9BYJ4 488 aa21.23■□□□□ 0.99
NR1H3-228ENST00000525441 ZFYVE28Q9HCC9 887 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms