RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 CTR9Q6PD62 1173 aa17.86■□□□□ 0.45
BEST1-204ENST00000524926 CPLX2Q6PUV4 134 aaKnown RBP17.86■□□□□ 0.45
BEST1-204ENST00000524926 LRSAM1Q6UWE0 723 aa17.86■□□□□ 0.45
BEST1-204ENST00000524926 C8orf76Q96K31 380 aa17.86■□□□□ 0.45
BEST1-204ENST00000524926 CD209Q9NNX6 404 aa17.86■□□□□ 0.45
BEST1-204ENST00000524926 CCDC88AQ3V6T2 1871 aa17.86■□□□□ 0.45
BEST1-204ENST00000524926 GOLGA8AA7E2F4 631 aa17.86■□□□□ 0.45
BEST1-204ENST00000524926 TMED8Q6PL24 325 aaPredicted RBP17.86■□□□□ 0.45
BEST1-204ENST00000524926 TBC1D16Q8TBP0 767 aa17.86■□□□□ 0.45
BEST1-204ENST00000524926 ESR2Q92731 530 aa17.86■□□□□ 0.45
BEST1-204ENST00000524926 POLLQ9UGP5 575 aa17.86■□□□□ 0.45
BEST1-204ENST00000524926 ELP1O95163 1332 aa17.85■□□□□ 0.45
BEST1-204ENST00000524926 BAZ2AQ9UIF9 1905 aaKnown RBP17.85■□□□□ 0.45
BEST1-204ENST00000524926 GOLGA6L4A6NEF3 574 aa17.85■□□□□ 0.45
BEST1-204ENST00000524926 PPEF1O14829 653 aaPredicted RBP17.85■□□□□ 0.45
BEST1-204ENST00000524926 CDKL5O76039 1030 aa17.85■□□□□ 0.45
BEST1-204ENST00000524926 MMP10P09238 476 aa17.85■□□□□ 0.45
BEST1-204ENST00000524926 CDC27P30260 824 aa17.85■□□□□ 0.45
BEST1-204ENST00000524926 OTUD7BQ6GQQ9 843 aa17.85■□□□□ 0.45
BEST1-204ENST00000524926 LEO1Q8WVC0 666 aaPredicted RBP17.85■□□□□ 0.45
BEST1-204ENST00000524926 UBAC1Q9BSL1 405 aa17.85■□□□□ 0.45
BEST1-204ENST00000524926 DCP1AQ9NPI6 582 aaPredicted RBP17.85■□□□□ 0.45
BEST1-204ENST00000524926 PODXL2Q9NZ53 605 aa17.85■□□□□ 0.45
BEST1-204ENST00000524926 CFAP45Q9UL16 551 aa17.85■□□□□ 0.45
BEST1-204ENST00000524926 PARP3Q9Y6F1 533 aa17.85■□□□□ 0.45
BEST1-204ENST00000524926 MSL1Q68DK7 614 aa17.84■□□□□ 0.45
BEST1-204ENST00000524926 ATP8A2Q9NTI2 1148 aa17.84■□□□□ 0.45
BEST1-204ENST00000524926 CEBPZQ03701 1054 aaKnown RBP17.84■□□□□ 0.45
BEST1-204ENST00000524926 CCDC183Q5T5S1 534 aa17.84■□□□□ 0.45
BEST1-204ENST00000524926 TAOK2Q9UL54 1235 aa17.84■□□□□ 0.45
BEST1-204ENST00000524926 RANBP6O60518 1105 aaKnown RBP17.83■□□□□ 0.45
BEST1-204ENST00000524926 PRDM1O75626 825 aa17.83■□□□□ 0.45
BEST1-204ENST00000524926 GRIK5Q16478 980 aa17.83■□□□□ 0.45
BEST1-204ENST00000524926 TMC4Q7Z404 712 aa17.83■□□□□ 0.45
BEST1-204ENST00000524926 SP8Q8IXZ3 490 aa17.83■□□□□ 0.45
BEST1-204ENST00000524926 TMTC2Q8N394 836 aa17.83■□□□□ 0.45
BEST1-204ENST00000524926 SRGNP10124 158 aa17.83■□□□□ 0.44
BEST1-204ENST00000524926 GSTO1P78417 241 aa17.83■□□□□ 0.44
BEST1-204ENST00000524926 DIXDC1Q155Q3 683 aa17.83■□□□□ 0.44
BEST1-204ENST00000524926 PHKBQ93100 1093 aa17.83■□□□□ 0.44
BEST1-204ENST00000524926 MTA3Q9BTC8 594 aa17.83■□□□□ 0.44
BEST1-204ENST00000524926 IL1R1P14778 569 aa17.82■□□□□ 0.44
BEST1-204ENST00000524926 NASPP49321 788 aaPredicted RBP17.82■□□□□ 0.44
BEST1-204ENST00000524926 FBXO18Q8NFZ0 1043 aa17.82■□□□□ 0.44
BEST1-204ENST00000524926 RBSNQ9H1K0 784 aa17.82■□□□□ 0.44
BEST1-204ENST00000524926 GJB4Q9NTQ9 266 aa17.82■□□□□ 0.44
BEST1-204ENST00000524926 IARSP41252 1262 aaKnown RBP17.82■□□□□ 0.44
BEST1-204ENST00000524926 FAM217BQ9NTX9 383 aaPredicted RBP17.82■□□□□ 0.44
BEST1-204ENST00000524926 ATP6V0A2Q9Y487 856 aa17.82■□□□□ 0.44
BEST1-204ENST00000524926 TNKSO95271 1327 aa17.81■□□□□ 0.44
BEST1-204ENST00000524926 IGSF3O75054 1194 aa17.81■□□□□ 0.44
BEST1-204ENST00000524926 BAG3O95817 575 aa17.81■□□□□ 0.44
BEST1-204ENST00000524926 NPR1P16066 1061 aa17.81■□□□□ 0.44
BEST1-204ENST00000524926 PDE6BP35913 854 aa17.81■□□□□ 0.44
BEST1-204ENST00000524926 USP5P45974 858 aa17.81■□□□□ 0.44
BEST1-204ENST00000524926 NOL10Q9BSC4 688 aaKnown RBP17.81■□□□□ 0.44
BEST1-204ENST00000524926 RIMBP2O15034 1052 aa17.81■□□□□ 0.44
BEST1-204ENST00000524926 PCP11498 1178 aaKnown RBP17.81■□□□□ 0.44
BEST1-204ENST00000524926 EVX2Q03828 476 aa17.81■□□□□ 0.44
BEST1-204ENST00000524926 NUP133Q8WUM0 1156 aa17.81■□□□□ 0.44
BEST1-204ENST00000524926 ZNF396Q96N95 335 aaPredicted RBP17.81■□□□□ 0.44
BEST1-204ENST00000524926 ALG1Q9BT22 464 aa17.81■□□□□ 0.44
BEST1-204ENST00000524926 MCM9Q9NXL9 1143 aa17.81■□□□□ 0.44
BEST1-204ENST00000524926 ARPP21Q9UBL0 812 aaPredicted RBP17.81■□□□□ 0.44
BEST1-204ENST00000524926 MAST2Q6P0Q8 1798 aa17.81■□□□□ 0.44
BEST1-204ENST00000524926 LDHCP07864 332 aa17.8■□□□□ 0.44
BEST1-204ENST00000524926 SLC3A2P08195 630 aaKnown RBP17.8■□□□□ 0.44
BEST1-204ENST00000524926 ALDH1B1P30837 517 aa17.8■□□□□ 0.44
BEST1-204ENST00000524926 NTRK3Q16288 839 aa17.8■□□□□ 0.44
BEST1-204ENST00000524926 SLC4A8Q2Y0W8 1093 aa17.8■□□□□ 0.44
BEST1-204ENST00000524926 AIFM3Q96NN9 605 aa17.8■□□□□ 0.44
BEST1-204ENST00000524926 ANKRD31Q8N7Z5 1873 aa17.8■□□□□ 0.44
BEST1-204ENST00000524926 LETM1O95202 739 aaPredicted RBP17.8■□□□□ 0.44
BEST1-204ENST00000524926 CYP2D6P10635 497 aa17.8■□□□□ 0.44
BEST1-204ENST00000524926 RTN1Q16799 776 aa17.8■□□□□ 0.44
BEST1-204ENST00000524926 IQCA1Q86XH1 822 aa17.8■□□□□ 0.44
BEST1-204ENST00000524926 SH3RF3Q8TEJ3 882 aaPredicted RBP17.8■□□□□ 0.44
BEST1-204ENST00000524926 ZSCAN10Q96SZ4 725 aaPredicted RBP17.8■□□□□ 0.44
BEST1-204ENST00000524926 SLC26A6Q9BXS9 759 aa17.8■□□□□ 0.44
BEST1-204ENST00000524926 FTOQ9C0B1 505 aaKnown RBP eCLIP17.8■□□□□ 0.44
BEST1-204ENST00000524926 RGS17Q9UGC6 210 aaPredicted RBP17.8■□□□□ 0.44
BEST1-204ENST00000524926 POLR3DP05423 398 aaPredicted RBP17.79■□□□□ 0.44
BEST1-204ENST00000524926 FGRP09769 529 aa17.79■□□□□ 0.44
BEST1-204ENST00000524926 SSRP1Q08945 709 aaKnown RBP17.79■□□□□ 0.44
BEST1-204ENST00000524926 MFSD14BQ5SR56 506 aa17.79■□□□□ 0.44
BEST1-204ENST00000524926 POTEAQ6S8J7 498 aa17.79■□□□□ 0.44
BEST1-204ENST00000524926 OLFM4Q6UX06 510 aa17.79■□□□□ 0.44
BEST1-204ENST00000524926 ILDR1Q86SU0 546 aaPredicted RBP17.79■□□□□ 0.44
BEST1-204ENST00000524926 ZNF654Q8IZM8 581 aa17.79■□□□□ 0.44
BEST1-204ENST00000524926 USP28Q96RU2 1077 aa17.79■□□□□ 0.44
BEST1-204ENST00000524926 TSPY26PQ9H489 355 aa17.79■□□□□ 0.44
BEST1-204ENST00000524926 MYH2Q9UKX2 1941 aa17.79■□□□□ 0.44
BEST1-204ENST00000524926 USP17L8P0C7I0 530 aa17.79■□□□□ 0.44
BEST1-204ENST00000524926 SEC23AQ15436 765 aa17.79■□□□□ 0.44
BEST1-204ENST00000524926 SBK1Q52WX2 424 aa17.79■□□□□ 0.44
BEST1-204ENST00000524926 ATL3Q6DD88 541 aa17.79■□□□□ 0.44
BEST1-204ENST00000524926 BICD2Q8TD16 824 aa17.79■□□□□ 0.44
BEST1-204ENST00000524926 TMX4Q9H1E5 349 aaPredicted RBP17.79■□□□□ 0.44
BEST1-204ENST00000524926 LIG1P18858 919 aa17.78■□□□□ 0.44
BEST1-204ENST00000524926 CCDC82Q8N4S0 544 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms