RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 LIFRP42702 1097 aa10.31□□□□□ -0.76
PKP3-202ENST00000524646 GNL2Q13823 731 aaKnown RBP10.31□□□□□ -0.76
PKP3-202ENST00000524646 NCAPHQ15003 741 aa10.31□□□□□ -0.76
PKP3-202ENST00000524646 PTPN14Q15678 1187 aa10.31□□□□□ -0.76
PKP3-202ENST00000524646 TMEM67Q5HYA8 995 aa10.31□□□□□ -0.76
PKP3-202ENST00000524646 NFXL1Q6ZNB6 911 aa10.31□□□□□ -0.76
PKP3-202ENST00000524646 TMC6Q7Z403 805 aa10.31□□□□□ -0.76
PKP3-202ENST00000524646 SYNE4Q8N205 404 aa10.31□□□□□ -0.76
PKP3-202ENST00000524646 WASF1Q92558 559 aa10.31□□□□□ -0.76
PKP3-202ENST00000524646 AIDAQ96BJ3 306 aa10.31□□□□□ -0.76
PKP3-202ENST00000524646 AIFM3Q96NN9 605 aa10.31□□□□□ -0.76
PKP3-202ENST00000524646 STRBPQ96SI9 672 aaKnown RBP10.31□□□□□ -0.76
PKP3-202ENST00000524646 CNNM2Q9H8M5 875 aa10.31□□□□□ -0.76
PKP3-202ENST00000524646 IFNKQ9P0W0 207 aa10.31□□□□□ -0.76
PKP3-202ENST00000524646 TRMT112Q9UI30 125 aaKnown RBP10.31□□□□□ -0.76
PKP3-202ENST00000524646 DENND2AQ9ULE3 1009 aa10.31□□□□□ -0.76
PKP3-202ENST00000524646 NAV1Q8NEY1 1877 aa10.31□□□□□ -0.76
PKP3-202ENST00000524646 PNPLA7Q6ZV29 1317 aa10.31□□□□□ -0.76
PKP3-202ENST00000524646 TAF1P21675 1872 aa10.3□□□□□ -0.76
PKP3-202ENST00000524646 PSDA5PKW4 1024 aaPredicted RBP10.3□□□□□ -0.76
PKP3-202ENST00000524646 BIN1O00499 593 aa10.3□□□□□ -0.76
PKP3-202ENST00000524646 CBFA2T2O43439 604 aa10.3□□□□□ -0.76
PKP3-202ENST00000524646 FMNL1O95466 1100 aaPredicted RBP10.3□□□□□ -0.76
PKP3-202ENST00000524646 APPP05067 770 aa10.3□□□□□ -0.76
PKP3-202ENST00000524646 SFPQP23246 707 aaKnown RBP eCLIP10.3□□□□□ -0.76
PKP3-202ENST00000524646 U2AF2P26368 475 aaKnown RBP eCLIP10.3□□□□□ -0.76
PKP3-202ENST00000524646 IL6STP40189 918 aaPredicted RBP10.3□□□□□ -0.76
PKP3-202ENST00000524646 IARSP41252 1262 aaKnown RBP10.3□□□□□ -0.76
PKP3-202ENST00000524646 RCAN1P53805 252 aa10.3□□□□□ -0.76
PKP3-202ENST00000524646 HSPA2P54652 639 aa10.3□□□□□ -0.76
PKP3-202ENST00000524646 MYL5Q02045 173 aa10.3□□□□□ -0.76
PKP3-202ENST00000524646 NTRK3Q16288 839 aa10.3□□□□□ -0.76
PKP3-202ENST00000524646 SHC4Q6S5L8 630 aa10.3□□□□□ -0.76
PKP3-202ENST00000524646 ZNF34Q8IZ26 560 aa10.3□□□□□ -0.76
PKP3-202ENST00000524646 NKX2-3Q8TAU0 364 aa10.3□□□□□ -0.76
PKP3-202ENST00000524646 MAP3K14Q99558 947 aa10.3□□□□□ -0.76
PKP3-202ENST00000524646 MTA3Q9BTC8 594 aa10.3□□□□□ -0.76
PKP3-202ENST00000524646 KRT23Q9C075 422 aa10.3□□□□□ -0.76
PKP3-202ENST00000524646 NAPBQ9H115 298 aa10.3□□□□□ -0.76
PKP3-202ENST00000524646 SLAIN2Q9P270 581 aa10.3□□□□□ -0.76
PKP3-202ENST00000524646 CCP110O43303 1012 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 IFNAR1P17181 557 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 GNAT2P19087 354 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 RXRAP19793 462 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 MARCKSP29966 332 aaPredicted RBP10.29□□□□□ -0.76
PKP3-202ENST00000524646 FANCCQ00597 558 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 SSRP1Q08945 709 aaKnown RBP10.29□□□□□ -0.76
PKP3-202ENST00000524646 MAP3K12Q12852 859 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 RASGRF1Q13972 1273 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 ARMCX5Q6P1M9 558 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 DZIP3Q86Y13 1208 aaKnown RBP10.29□□□□□ -0.76
PKP3-202ENST00000524646 ELOA2Q8IYF1 753 aaPredicted RBP10.29□□□□□ -0.76
PKP3-202ENST00000524646 SPATA5Q8NB90 893 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 KIF18AQ8NI77 898 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 IGDCC4Q8TDY8 1250 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 STAG1Q8WVM7 1258 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 PHKBQ93100 1093 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 ERO1AQ96HE7 468 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 PPP1R13BQ96KQ4 1090 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 SLC4A9Q96Q91 983 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 FEZ1Q99689 392 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.29□□□□□ -0.76
PKP3-202ENST00000524646 SENP2Q9HC62 589 aa10.29□□□□□ -0.76
PKP3-202ENST00000524646 FAM217BQ9NTX9 383 aaPredicted RBP10.29□□□□□ -0.76
PKP3-202ENST00000524646 PATL2C9JE40 543 aaKnown RBP10.28□□□□□ -0.76
PKP3-202ENST00000524646 IFIT3O14879 490 aaKnown RBP10.28□□□□□ -0.76
PKP3-202ENST00000524646 TUBB4AP04350 444 aa10.28□□□□□ -0.76
PKP3-202ENST00000524646 RTN1Q16799 776 aa10.28□□□□□ -0.76
PKP3-202ENST00000524646 AKNAD1Q5T1N1 836 aa10.28□□□□□ -0.76
PKP3-202ENST00000524646 UTP14CQ5TAP6 766 aaKnown RBP10.28□□□□□ -0.76
PKP3-202ENST00000524646 OLFM4Q6UX06 510 aa10.28□□□□□ -0.76
PKP3-202ENST00000524646 KRBA2Q6ZNG9 492 aa10.28□□□□□ -0.76
PKP3-202ENST00000524646 METTL16Q86W50 562 aaKnown RBP10.28□□□□□ -0.76
PKP3-202ENST00000524646 TRIM22Q8IYM9 498 aa10.28□□□□□ -0.76
PKP3-202ENST00000524646 IFNL3Q8IZI9 196 aa10.28□□□□□ -0.76
PKP3-202ENST00000524646 MAGEB6Q8N7X4 407 aa10.28□□□□□ -0.76
PKP3-202ENST00000524646 KRI1Q8N9T8 703 aaKnown RBP10.28□□□□□ -0.76
PKP3-202ENST00000524646 ZNF397Q8NF99 534 aaPredicted RBP10.28□□□□□ -0.76
PKP3-202ENST00000524646 ZNF592Q92610 1267 aa10.28□□□□□ -0.76
PKP3-202ENST00000524646 NOL10Q9BSC4 688 aaKnown RBP10.28□□□□□ -0.76
PKP3-202ENST00000524646 SLC26A6Q9BXS9 759 aa10.28□□□□□ -0.76
PKP3-202ENST00000524646 HSD3B7Q9H2F3 369 aa10.28□□□□□ -0.76
PKP3-202ENST00000524646 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.28□□□□□ -0.76
PKP3-202ENST00000524646 SLC12A7Q9Y666 1083 aa10.28□□□□□ -0.76
PKP3-202ENST00000524646 COL1A1P02452 1464 aaPredicted RBP10.28□□□□□ -0.76
PKP3-202ENST00000524646 MYH8P13535 1937 aa10.27□□□□□ -0.76
PKP3-202ENST00000524646 MMP1P03956 469 aa10.27□□□□□ -0.77
PKP3-202ENST00000524646 LMOD1P29536 600 aaPredicted RBP10.27□□□□□ -0.77
PKP3-202ENST00000524646 TDO2P48775 406 aa10.27□□□□□ -0.77
PKP3-202ENST00000524646 CTDSPL2Q05D32 466 aa10.27□□□□□ -0.77
PKP3-202ENST00000524646 DMTNQ08495 405 aa10.27□□□□□ -0.77
PKP3-202ENST00000524646 PNOCQ13519 176 aa10.27□□□□□ -0.77
PKP3-202ENST00000524646 SART3Q15020 963 aaKnown RBP10.27□□□□□ -0.77
PKP3-202ENST00000524646 SAFBQ15424 915 aaKnown RBP eCLIP10.27□□□□□ -0.77
PKP3-202ENST00000524646 E4F1Q66K89 784 aaPredicted RBP10.27□□□□□ -0.77
PKP3-202ENST00000524646 FCHSD1Q86WN1 690 aa10.27□□□□□ -0.77
PKP3-202ENST00000524646 NOSTRINQ8IVI9 506 aa10.27□□□□□ -0.77
PKP3-202ENST00000524646 PKNOX2Q96KN3 472 aa10.27□□□□□ -0.77
PKP3-202ENST00000524646 MYL10Q9BUA6 226 aa10.27□□□□□ -0.77
PKP3-202ENST00000524646 NACAP1Q9BZK3 213 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms