RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	ARPC5L	Q9BPX5	153 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	L1RE1	Q9UN81	338 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	TMEM221	A6NGB7	291 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	EBAG9	O00559	213 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	GADD45B	O75293	160 aa	Predicted RBP	4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	MYL6B	P14649	208 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	EZR	P15311	586 aa	Known RBP	4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	RPL13	P26373	211 aa	Known RBP	4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	PKP1	Q13835	747 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	NFXL1	Q6ZNB6	911 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	UBE3B	Q7Z3V4	1068 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	ANKRD13B	Q86YJ7	626 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	DRC7	Q8IY82	874 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	RBM17	Q96I25	401 aa	Known RBP	4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	ZWILCH	Q9H900	591 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	PHF24	Q9UPV7	400 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	PCDHGC5	Q9Y5F6	944 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	FER1L4	A9Z1Z3	1794 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	NUP153	P49790	1475 aa	Known RBP	4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	GOLGA6L10	A6NI86	522 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	TMEM232	C9JQI7	657 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	ZSCAN12	O43309	604 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	LBR	Q14739	615 aa	Known RBP	4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	PKN1	Q16512	942 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	SGSM1	Q2NKQ1	1148 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	NBPF14	Q5TI25	921 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	SULT6B1	Q6IMI4	303 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	ARMCX6	Q7L4S7	300 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	ERMN	Q8TAM6	284 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	EZH1	Q92800	747 aa	Predicted RBP	4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	GORASP1	Q9BQQ3	440 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	CCDC28B	Q9BUN5	200 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	LUC7L	Q9NQ29	371 aa	Known RBP	4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	ARHGEF40	Q8TER5	1519 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	DLC1	Q96QB1	1528 aa		4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	ZNF142	P52746	1687 aa	Predicted RBP	4.37	□□□□□ -1.71
FAM49B-225	ENST00000523288	SBNO1	A3KN83	1393 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	GPR75-ASB3	A0A0A6YYF3	556 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	CCDC162P	A2VCL2	907 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	GOLGA8K	D6RF30	607 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	EIF3H	O15372	352 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	F13A1	P00488	732 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	E4F1	Q66K89	784 aa	Predicted RBP	4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	CCDC73	Q6ZRK6	1079 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	OTUD6A	Q7L8S5	288 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	GALNT15	Q8N3T1	639 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	SMYD1	Q8NB12	490 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	CNNM3	Q8NE01	707 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	BHMT	Q93088	406 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	KIFC2	Q96AC6	838 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	ACSBG1	Q96GR2	724 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	SH3GL2	Q99962	352 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	TMOD3	Q9NYL9	352 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	ASB3	Q9Y575	518 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	SLC4A7	Q9Y6M7	1214 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	NRK	Q7Z2Y5	1582 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	RPGRIP1L	Q68CZ1	1315 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	CPLX1	O14810	134 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	WDR46	O15213	610 aa	Known RBP	4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	MEFV	O15553	781 aa	Predicted RBP	4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	E2F6	O75461	281 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	ALAD	P13716	330 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	TRPC1	P48995	793 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	CLNS1A	P54105	237 aa	Known RBP	4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	LAMB3	Q13751	1172 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	CCDC144B	Q3MJ40	725 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	FOXR1	Q6PIV2	292 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	WAPL	Q7Z5K2	1190 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	TRIM42	Q8IWZ5	723 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	CCDC144CP	Q8IYA2	1237 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	LRRC43	Q8N309	656 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	ANKRD44	Q8N8A2	993 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	LMBR1	Q8WVP7	490 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	CCDC85A	Q96PX6	553 aa	Predicted RBP	4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	TRAPPC9	Q96Q05	1148 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	JPH2	Q9BR39	696 aa	Predicted RBP	4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	PARD6B	Q9BYG5	372 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	TMOD2	Q9NZR1	351 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	ERVK-7	P63135	1459 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	SHTN1	A0MZ66	631 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	CCDC69	A6NI79	296 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	USP27X	A6NNY8	438 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	BIN1	O00499	593 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	WFS1	O76024	890 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	VCAM1	P19320	739 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	TNFRSF8	P28908	595 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	CNGA1	P29973	690 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	HSP90AB2P	Q58FF8	381 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	WDR78	Q5VTH9	848 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	ATF7IP	Q6VMQ6	1270 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	PARP9	Q8IXQ6	854 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	ZGPAT	Q8N5A5	531 aa	Known RBP	4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	TBC1D5	Q92609	795 aa		4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	THOC1	Q96FV9	657 aa	Known RBP	4.36	□□□□□ -1.71
FAM49B-225	ENST00000523288	JAKMIP1	Q96N16	626 aa	Known RBP	4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms