RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 SMIM5Q71RC9 77 aa7.78□□□□□ -1.16
SHPRH-210ENST00000523276 SGMS1Q86VZ5 419 aa7.78□□□□□ -1.16
SHPRH-210ENST00000523276 FBXO18Q8NFZ0 1043 aa7.78□□□□□ -1.16
SHPRH-210ENST00000523276 IGDCC4Q8TDY8 1250 aa7.78□□□□□ -1.16
SHPRH-210ENST00000523276 SLC39A7Q92504 469 aa7.78□□□□□ -1.16
SHPRH-210ENST00000523276 NACAP1Q9BZK3 213 aa7.78□□□□□ -1.16
SHPRH-210ENST00000523276 FTOQ9C0B1 505 aaKnown RBP eCLIP7.78□□□□□ -1.16
SHPRH-210ENST00000523276 CNNM2Q9H8M5 875 aa7.78□□□□□ -1.16
SHPRH-210ENST00000523276 LY9Q9HBG7 655 aa7.78□□□□□ -1.16
SHPRH-210ENST00000523276 LRP2BPQ9P2M1 347 aa7.78□□□□□ -1.16
SHPRH-210ENST00000523276 USP21Q9UK80 565 aa7.78□□□□□ -1.16
SHPRH-210ENST00000523276 MINPP1Q9UNW1 487 aa7.78□□□□□ -1.16
SHPRH-210ENST00000523276 SLC4A4Q9Y6R1 1079 aa7.78□□□□□ -1.16
SHPRH-210ENST00000523276 COL1A1P02452 1464 aaPredicted RBP7.77□□□□□ -1.17
SHPRH-210ENST00000523276 GNPATO15228 680 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 PRKAB2O43741 272 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 KDM4AO75164 1064 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 CDKL5O76039 1030 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 POTEJP0CG39 1038 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 GTF2E1P29083 439 aaPredicted RBP7.77□□□□□ -1.17
SHPRH-210ENST00000523276 LIFRP42702 1097 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 GYG1P46976 350 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 TMEM67Q5HYA8 995 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 AKNAD1Q5T1N1 836 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 OTUD7BQ6GQQ9 843 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 STAG1Q8WVM7 1258 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 CELF1Q92879 486 aaKnown RBP7.77□□□□□ -1.17
SHPRH-210ENST00000523276 KRT23Q9C075 422 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 SENP2Q9HC62 589 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 RTEL1Q9NZ71 1219 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.77□□□□□ -1.17
SHPRH-210ENST00000523276 SRP68Q9UHB9 627 aaKnown RBP7.77□□□□□ -1.17
SHPRH-210ENST00000523276 USP25Q9UHP3 1055 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 TACC3Q9Y6A5 838 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 MRVI1Q9Y6F6 885 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 SPATA31A6Q5VVP1 1343 aa7.77□□□□□ -1.17
SHPRH-210ENST00000523276 NHSQ6T4R5 1651 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 ZBTB43O43298 467 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 ZPR1O75312 459 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 CYP7A1P22680 504 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 TDO2P48775 406 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 CAVIN4Q5BKX8 364 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 MFSD6Q6ZSS7 791 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 BRAPQ7Z569 592 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 NBPF5PQ86XG9 351 aaPredicted RBP7.76□□□□□ -1.17
SHPRH-210ENST00000523276 CCAR1Q8IX12 1150 aaKnown RBP7.76□□□□□ -1.17
SHPRH-210ENST00000523276 CKAP2LQ8IYA6 745 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 MIGA1Q8NAN2 632 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 FAM200AQ8TCP9 573 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 SETDB2Q96T68 719 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 INCENPQ9NQS7 918 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 CCNL1Q9UK58 526 aaPredicted RBP7.76□□□□□ -1.17
SHPRH-210ENST00000523276 IQSEC3Q9UPP2 1182 aaPredicted RBP7.76□□□□□ -1.17
SHPRH-210ENST00000523276 COLQQ9Y215 455 aaPredicted RBP7.76□□□□□ -1.17
SHPRH-210ENST00000523276 ZKSCAN5Q9Y2L8 839 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 NID2Q14112 1375 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 WTIPA6NIX2 430 aaPredicted RBP7.76□□□□□ -1.17
SHPRH-210ENST00000523276 GOLGA8AA7E2F4 631 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 ADCY5O95622 1261 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 CDC27P30260 824 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 MLLT3P42568 568 aaPredicted RBP7.76□□□□□ -1.17
SHPRH-210ENST00000523276 KIF23Q02241 960 aaPredicted RBP7.76□□□□□ -1.17
SHPRH-210ENST00000523276 CPLX2Q6PUV4 134 aaKnown RBP7.76□□□□□ -1.17
SHPRH-210ENST00000523276 NFXL1Q6ZNB6 911 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 FBXO33Q7Z6M2 555 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 ADGRA1Q86SQ6 560 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 GPIHBP1Q8IV16 184 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 FAM84BQ96KN1 310 aaPredicted RBP7.76□□□□□ -1.17
SHPRH-210ENST00000523276 NLRP3Q96P20 1036 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 MTA3Q9BTC8 594 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 GOLPH3LQ9H4A5 285 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 RAI14Q9P0K7 980 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 ZSWIM5Q9P217 1185 aa7.76□□□□□ -1.17
SHPRH-210ENST00000523276 RTCBQ9Y3I0 505 aaKnown RBP7.76□□□□□ -1.17
SHPRH-210ENST00000523276 C4AP0C0L4 1744 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 C4BP0C0L5 1744 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 COL24A1Q17RW2 1714 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 MAGEB6P1A0A0J9YX57 407 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 KIF28PB7ZC32 967 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 IFIT3O14879 490 aaKnown RBP7.75□□□□□ -1.17
SHPRH-210ENST00000523276 CTAGE5O15320 804 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 RAD21O60216 631 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 ZNF500O60304 480 aaPredicted RBP7.75□□□□□ -1.17
SHPRH-210ENST00000523276 YEATS4O95619 227 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 PTMAP06454 111 aaKnown RBP7.75□□□□□ -1.17
SHPRH-210ENST00000523276 RXRAP19793 462 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 ME1P48163 572 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 PSEN1P49768 467 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 RPS8P62241 208 aaKnown RBP7.75□□□□□ -1.17
SHPRH-210ENST00000523276 FAM160A1Q05DH4 1040 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 NTRK3Q16288 839 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 MYSM1Q5VVJ2 828 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 CCDC73Q6ZRK6 1079 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 AMIGO3Q86WK7 504 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 MICU3Q86XE3 530 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 VPS37DQ86XT2 251 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 LINC00301Q8NCQ3 95 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 ENGASEQ8NFI3 743 aa7.75□□□□□ -1.17
SHPRH-210ENST00000523276 RIOK1Q9BRS2 568 aaKnown RBP7.75□□□□□ -1.17
SHPRH-210ENST00000523276 ALG1Q9BT22 464 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms