RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 CRHR2Q13324 411 aa19.89■□□□□ 0.77
CLN8-206ENST00000523237 PPIL2Q13356 520 aa19.89■□□□□ 0.77
CLN8-206ENST00000523237 PICALMQ13492 652 aa19.89■□□□□ 0.77
CLN8-206ENST00000523237 HSP90AB4PQ58FF6 505 aa19.89■□□□□ 0.77
CLN8-206ENST00000523237 BRI3BPQ8WY22 251 aa19.89■□□□□ 0.77
CLN8-206ENST00000523237 DBNLQ9UJU6 430 aaKnown RBP19.89■□□□□ 0.77
CLN8-206ENST00000523237 MYO5AQ9Y4I1 1855 aaKnown RBP19.89■□□□□ 0.77
CLN8-206ENST00000523237 IRF6O14896 467 aa19.88■□□□□ 0.77
CLN8-206ENST00000523237 CETPP11597 493 aa19.88■□□□□ 0.77
CLN8-206ENST00000523237 RHBDL3P58872 404 aa19.88■□□□□ 0.77
CLN8-206ENST00000523237 SNAPC2Q13487 334 aa19.88■□□□□ 0.77
CLN8-206ENST00000523237 RPAP2Q8IXW5 612 aaPredicted RBP19.88■□□□□ 0.77
CLN8-206ENST00000523237 EAF2Q96CJ1 260 aaPredicted RBP19.88■□□□□ 0.77
CLN8-206ENST00000523237 NOL10Q9BSC4 688 aaKnown RBP19.88■□□□□ 0.77
CLN8-206ENST00000523237 CCDC8Q9H0W5 538 aaPredicted RBP19.88■□□□□ 0.77
CLN8-206ENST00000523237 DDX4Q9NQI0 724 aaKnown RBP19.88■□□□□ 0.77
CLN8-206ENST00000523237 ZBTB40Q9NUA8 1239 aa19.88■□□□□ 0.77
CLN8-206ENST00000523237 ATRNL1Q5VV63 1379 aa19.87■□□□□ 0.77
CLN8-206ENST00000523237 IGSF3O75054 1194 aa19.87■□□□□ 0.77
CLN8-206ENST00000523237 NPM3O75607 178 aaKnown RBP19.87■□□□□ 0.77
CLN8-206ENST00000523237 NOL9Q5SY16 702 aaKnown RBP19.87■□□□□ 0.77
CLN8-206ENST00000523237 TLR7Q9NYK1 1049 aaKnown RBP19.87■□□□□ 0.77
CLN8-206ENST00000523237 DDTLA6NHG4 134 aaPredicted RBP19.86■□□□□ 0.77
CLN8-206ENST00000523237 HMMRO75330 724 aa19.86■□□□□ 0.77
CLN8-206ENST00000523237 CYP2E1P05181 493 aaPredicted RBP19.86■□□□□ 0.77
CLN8-206ENST00000523237 ZAP70P43403 619 aa19.86■□□□□ 0.77
CLN8-206ENST00000523237 TAF1CQ15572 869 aaPredicted RBP19.86■□□□□ 0.77
CLN8-206ENST00000523237 NAA16Q6N069 864 aaPredicted RBP19.86■□□□□ 0.77
CLN8-206ENST00000523237 SH3BP5LQ7L8J4 393 aa19.86■□□□□ 0.77
CLN8-206ENST00000523237 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.86■□□□□ 0.77
CLN8-206ENST00000523237 AACSQ86V21 672 aa19.85■□□□□ 0.77
CLN8-206ENST00000523237 FAM43AQ8N2R8 423 aa19.85■□□□□ 0.77
CLN8-206ENST00000523237 ERO1AQ96HE7 468 aa19.85■□□□□ 0.77
CLN8-206ENST00000523237 ZFYVE28Q9HCC9 887 aa19.85■□□□□ 0.77
CLN8-206ENST00000523237 ZCCHC17Q9NP64 241 aaKnown RBP19.85■□□□□ 0.77
CLN8-206ENST00000523237 DOCK1Q14185 1865 aa19.84■□□□□ 0.77
CLN8-206ENST00000523237 PHF20L1A8MW92 1017 aa19.84■□□□□ 0.77
CLN8-206ENST00000523237 BAG3O95817 575 aa19.84■□□□□ 0.77
CLN8-206ENST00000523237 MAP3K10Q02779 954 aa19.84■□□□□ 0.77
CLN8-206ENST00000523237 PDE3AQ14432 1141 aa19.84■□□□□ 0.77
CLN8-206ENST00000523237 FBXO46Q6PJ61 603 aaPredicted RBP19.84■□□□□ 0.77
CLN8-206ENST00000523237 RHPN1Q8TCX5 695 aa19.84■□□□□ 0.77
CLN8-206ENST00000523237 HPS5Q9UPZ3 1129 aa19.84■□□□□ 0.77
CLN8-206ENST00000523237 COL2A1P02458 1487 aaPredicted RBP19.84■□□□□ 0.77
CLN8-206ENST00000523237 CDK5RAP2Q96SN8 1893 aa19.84■□□□□ 0.77
CLN8-206ENST00000523237 FOCADQ5VW36 1801 aa19.83■□□□□ 0.77
CLN8-206ENST00000523237 PLCG2P16885 1265 aa19.83■□□□□ 0.77
CLN8-206ENST00000523237 SP3Q02447 781 aa19.83■□□□□ 0.77
CLN8-206ENST00000523237 TEX11Q8IYF3 940 aa19.83■□□□□ 0.77
CLN8-206ENST00000523237 SCYL3Q8IZE3 742 aa19.83■□□□□ 0.77
CLN8-206ENST00000523237 OSBPL5Q9H0X9 879 aaPredicted RBP19.83■□□□□ 0.77
CLN8-206ENST00000523237 IL1RAPL2Q9NP60 686 aa19.83■□□□□ 0.77
CLN8-206ENST00000523237 KCNH4Q9UQ05 1017 aa19.83■□□□□ 0.77
CLN8-206ENST00000523237 BTBD19C9JJ37 291 aa19.82■□□□□ 0.76
CLN8-206ENST00000523237 RGS19P49795 217 aa19.82■□□□□ 0.76
CLN8-206ENST00000523237 SIRT2Q8IXJ6 389 aa19.82■□□□□ 0.76
CLN8-206ENST00000523237 CLASRPQ8N2M8 674 aaKnown RBP19.82■□□□□ 0.76
CLN8-206ENST00000523237 SH3RF3Q8TEJ3 882 aaPredicted RBP19.82■□□□□ 0.76
CLN8-206ENST00000523237 KIF1BPQ96EK5 621 aa19.82■□□□□ 0.76
CLN8-206ENST00000523237 PIH1D3Q9NQM4 214 aaKnown RBP19.82■□□□□ 0.76
CLN8-206ENST00000523237 PICK1Q9NRD5 415 aa19.82■□□□□ 0.76
CLN8-206ENST00000523237 AATFQ9NY61 560 aaKnown RBP eCLIP19.82■□□□□ 0.76
CLN8-206ENST00000523237 TRIM17Q9Y577 477 aa19.82■□□□□ 0.76
CLN8-206ENST00000523237 APBB1O00213 710 aa19.81■□□□□ 0.76
CLN8-206ENST00000523237 TBC1D12O60347 775 aa19.81■□□□□ 0.76
CLN8-206ENST00000523237 CTNND1O60716 968 aaKnown RBP19.81■□□□□ 0.76
CLN8-206ENST00000523237 C20orf194Q5TEA3 1177 aa19.81■□□□□ 0.76
CLN8-206ENST00000523237 OTOP1Q7RTM1 612 aa19.81■□□□□ 0.76
CLN8-206ENST00000523237 CD99L2Q8TCZ2 262 aa19.81■□□□□ 0.76
CLN8-206ENST00000523237 CXCL11O14625 94 aa19.8■□□□□ 0.76
CLN8-206ENST00000523237 RAB11FIP3O75154 756 aa19.8■□□□□ 0.76
CLN8-206ENST00000523237 IDH1O75874 414 aaKnown RBP19.8■□□□□ 0.76
CLN8-206ENST00000523237 PTPRAP18433 802 aa19.8■□□□□ 0.76
CLN8-206ENST00000523237 PPP4CP60510 307 aa19.8■□□□□ 0.76
CLN8-206ENST00000523237 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.8■□□□□ 0.763e-6■■■■■ 29.3
CLN8-206ENST00000523237 PHIPQ8WWQ0 1821 aa19.8■□□□□ 0.76
CLN8-206ENST00000523237 ATAD5Q96QE3 1844 aa19.8■□□□□ 0.76
CLN8-206ENST00000523237 TLR2O60603 784 aa19.79■□□□□ 0.76
CLN8-206ENST00000523237 ANKRD23Q86SG2 305 aa19.79■□□□□ 0.76
CLN8-206ENST00000523237 ADGRA1Q86SQ6 560 aa19.79■□□□□ 0.76
CLN8-206ENST00000523237 PTPRFP10586 1907 aa19.78■□□□□ 0.76
CLN8-206ENST00000523237 IFIT2P09913 472 aaKnown RBP19.78■□□□□ 0.76
CLN8-206ENST00000523237 SLURP2P0DP57 97 aa19.78■□□□□ 0.76
CLN8-206ENST00000523237 CYP7A1P22680 504 aa19.78■□□□□ 0.76
CLN8-206ENST00000523237 MLLT1Q03111 559 aaPredicted RBP19.78■□□□□ 0.76
CLN8-206ENST00000523237 ARHGEF6Q15052 776 aa19.78■□□□□ 0.76
CLN8-206ENST00000523237 TMED8Q6PL24 325 aaPredicted RBP19.78■□□□□ 0.76
CLN8-206ENST00000523237 DHX36Q9H2U1 1008 aaKnown RBP19.78■□□□□ 0.76
CLN8-206ENST00000523237 EFCC1Q9HA90 598 aa19.78■□□□□ 0.76
CLN8-206ENST00000523237 NDUFB9Q9Y6M9 179 aa19.78■□□□□ 0.76
CLN8-206ENST00000523237 ZHX2Q9Y6X8 837 aa19.78■□□□□ 0.76
CLN8-206ENST00000523237 FAM196BA6NMK8 535 aa19.77■□□□□ 0.76
CLN8-206ENST00000523237 PDHXO00330 501 aa19.77■□□□□ 0.76
CLN8-206ENST00000523237 MAP3K12Q12852 859 aa19.77■□□□□ 0.76
CLN8-206ENST00000523237 CERS3Q8IU89 383 aa19.77■□□□□ 0.76
CLN8-206ENST00000523237 TGFBRAP1Q8WUH2 860 aa19.77■□□□□ 0.76
CLN8-206ENST00000523237 PI4KBQ9UBF8 816 aa19.77■□□□□ 0.76
CLN8-206ENST00000523237 HERC5Q9UII4 1024 aaKnown RBP19.77■□□□□ 0.76
CLN8-206ENST00000523237 SIPA1L1O43166 1804 aa19.76■□□□□ 0.75
CLN8-206ENST00000523237 SOX10P56693 466 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms