RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 POLKQ9UBT6 870 aa8.74□□□□□ -1.01
VPS13B-211ENST00000522802 NARFQ9UHQ1 456 aa8.74□□□□□ -1.01
VPS13B-211ENST00000522802 ZBTB1Q9Y2K1 713 aa8.74□□□□□ -1.01
VPS13B-211ENST00000522802 CARNS1A5YM72 827 aa8.73□□□□□ -1.01
VPS13B-211ENST00000522802 IQCA1LA6NCM1 817 aa8.73□□□□□ -1.01
VPS13B-211ENST00000522802 HSP90AB1P08238 724 aaKnown RBP8.73□□□□□ -1.01
VPS13B-211ENST00000522802 IGFBP4P22692 258 aa8.73□□□□□ -1.01
VPS13B-211ENST00000522802 PTSQ03393 145 aa8.73□□□□□ -1.01
VPS13B-211ENST00000522802 BICDL1Q6ZP65 573 aa8.73□□□□□ -1.01
VPS13B-211ENST00000522802 AEBP1Q8IUX7 1158 aa8.73□□□□□ -1.01
VPS13B-211ENST00000522802 NPAS3Q8IXF0 933 aa8.73□□□□□ -1.01
VPS13B-211ENST00000522802 ZDHHC1Q8WTX9 485 aa8.73□□□□□ -1.01
VPS13B-211ENST00000522802 ZNF622Q969S3 477 aaKnown RBP eCLIP8.73□□□□□ -1.014e-6■■■■□ 26.2
VPS13B-211ENST00000522802 ERBB4Q15303 1308 aa8.73□□□□□ -1.01
VPS13B-211ENST00000522802 TRPM7Q96QT4 1865 aa8.72□□□□□ -1.01
VPS13B-211ENST00000522802 CASP8AP2Q9UKL3 1982 aa8.72□□□□□ -1.01
VPS13B-211ENST00000522802 LOC100996750A0A140TA64 210 aa8.72□□□□□ -1.01
VPS13B-211ENST00000522802 SLC35F4A4IF30 521 aa8.72□□□□□ -1.01
VPS13B-211ENST00000522802 CYP19A1P11511 503 aaPredicted RBP8.72□□□□□ -1.01
VPS13B-211ENST00000522802 NOS2P35228 1153 aa8.72□□□□□ -1.01
VPS13B-211ENST00000522802 PHKA2P46019 1235 aa8.72□□□□□ -1.01
VPS13B-211ENST00000522802 MTHFSP49914 203 aa8.72□□□□□ -1.01
VPS13B-211ENST00000522802 PSMA6P60900 246 aaKnown RBP8.72□□□□□ -1.01
VPS13B-211ENST00000522802 MAP2K1Q02750 393 aaPredicted RBP8.72□□□□□ -1.01
VPS13B-211ENST00000522802 DEFB115Q30KQ5 88 aa8.72□□□□□ -1.01
VPS13B-211ENST00000522802 MAP1SQ66K74 1059 aaPredicted RBP8.72□□□□□ -1.01
VPS13B-211ENST00000522802 KRTAP4-6Q9BYQ5 205 aa8.72□□□□□ -1.01
VPS13B-211ENST00000522802 TIMMDC1Q9NPL8 285 aa8.72□□□□□ -1.01
VPS13B-211ENST00000522802 ABT1Q9ULW3 272 aaKnown RBP8.72□□□□□ -1.01
VPS13B-211ENST00000522802 COL4A5P29400 1685 aa8.72□□□□□ -1.01
VPS13B-211ENST00000522802 H3BM21 787 aa8.71□□□□□ -1.02
VPS13B-211ENST00000522802 PPP1R12BO60237 982 aaPredicted RBP8.71□□□□□ -1.02
VPS13B-211ENST00000522802 TNNT2P45379 298 aaPredicted RBP8.71□□□□□ -1.02
VPS13B-211ENST00000522802 HIRAP54198 1017 aaPredicted RBP8.71□□□□□ -1.02
VPS13B-211ENST00000522802 FMR1Q06787 632 aaKnown RBP eCLIP8.71□□□□□ -1.02
VPS13B-211ENST00000522802 PDE4CQ08493 712 aa8.71□□□□□ -1.02
VPS13B-211ENST00000522802 GRM1Q13255 1194 aa8.71□□□□□ -1.02
VPS13B-211ENST00000522802 PLEKHO1Q53GL0 409 aaPredicted RBP8.71□□□□□ -1.02
VPS13B-211ENST00000522802 PRPF40BQ6NWY9 871 aaKnown RBP8.71□□□□□ -1.02
VPS13B-211ENST00000522802 PRIMPOLQ96LW4 560 aa8.71□□□□□ -1.02
VPS13B-211ENST00000522802 C2orf49Q9BVC5 232 aaPredicted RBP8.71□□□□□ -1.02
VPS13B-211ENST00000522802 DYRK1BQ9Y463 629 aa8.71□□□□□ -1.02
VPS13B-211ENST00000522802 RNF123Q5XPI4 1314 aa8.71□□□□□ -1.02
VPS13B-211ENST00000522802 SERTM1A2A2V5 107 aa8.7□□□□□ -1.02
VPS13B-211ENST00000522802 EML1O00423 815 aa8.7□□□□□ -1.02
VPS13B-211ENST00000522802 PRMT3O60678 531 aa8.7□□□□□ -1.02
VPS13B-211ENST00000522802 EPHX2P34913 555 aa8.7□□□□□ -1.02
VPS13B-211ENST00000522802 C1orf141Q5JVX7 400 aa8.7□□□□□ -1.02
VPS13B-211ENST00000522802 TBC1D9BQ66K14 1250 aa8.7□□□□□ -1.02
VPS13B-211ENST00000522802 PRR5LQ6MZQ0 368 aa8.7□□□□□ -1.02
VPS13B-211ENST00000522802 CAPNS2Q96L46 248 aa8.7□□□□□ -1.02
VPS13B-211ENST00000522802 MCOLN1Q9GZU1 580 aa8.7□□□□□ -1.02
VPS13B-211ENST00000522802 HACL1Q9UJ83 578 aa8.7□□□□□ -1.02
VPS13B-211ENST00000522802 A0A1B0GTH6 734 aa8.69□□□□□ -1.02
VPS13B-211ENST00000522802 PLA2G4AP47712 749 aa8.69□□□□□ -1.02
VPS13B-211ENST00000522802 SLC39A6Q13433 755 aa8.69□□□□□ -1.02
VPS13B-211ENST00000522802 AMOTQ4VCS5 1084 aa8.69□□□□□ -1.02
VPS13B-211ENST00000522802 CYP4F22Q6NT55 531 aa8.69□□□□□ -1.02
VPS13B-211ENST00000522802 OLFM4Q6UX06 510 aa8.69□□□□□ -1.02
VPS13B-211ENST00000522802 CNTROBQ8N137 903 aa8.69□□□□□ -1.02
VPS13B-211ENST00000522802 CCDC155Q8N6L0 562 aa8.69□□□□□ -1.02
VPS13B-211ENST00000522802 BRIP1Q9BX63 1249 aa8.69□□□□□ -1.02
VPS13B-211ENST00000522802 CXXC1Q9P0U4 656 aaPredicted RBP8.69□□□□□ -1.02
VPS13B-211ENST00000522802 CANXP27824 592 aaKnown RBP8.68□□□□□ -1.02
VPS13B-211ENST00000522802 PDE6BP35913 854 aa8.68□□□□□ -1.02
VPS13B-211ENST00000522802 SH3PXD2AQ5TCZ1 1133 aa8.68□□□□□ -1.02
VPS13B-211ENST00000522802 PHLDB3Q6NSJ2 640 aa8.68□□□□□ -1.02
VPS13B-211ENST00000522802 C7orf43Q8WVR3 580 aa8.68□□□□□ -1.02
VPS13B-211ENST00000522802 SLC52A2Q9HAB3 445 aa8.68□□□□□ -1.02
VPS13B-211ENST00000522802 DDX21Q9NR30 783 aaKnown RBP eCLIP8.68□□□□□ -1.022e-21■■■■■ 83.8
VPS13B-211ENST00000522802 ZNF277Q9NRM2 450 aaPredicted RBP8.68□□□□□ -1.02
VPS13B-211ENST00000522802 SIPA1L3O60292 1781 aaPredicted RBP8.68□□□□□ -1.02
VPS13B-211ENST00000522802 TRAF5O00463 557 aa8.67□□□□□ -1.02
VPS13B-211ENST00000522802 AOC2O75106 756 aa8.67□□□□□ -1.02
VPS13B-211ENST00000522802 F11P03951 625 aa8.67□□□□□ -1.02
VPS13B-211ENST00000522802 SRGNP10124 158 aa8.67□□□□□ -1.02
VPS13B-211ENST00000522802 ATP2B4P23634 1241 aa8.67□□□□□ -1.02
VPS13B-211ENST00000522802 MSX1P28360 303 aa8.67□□□□□ -1.02
VPS13B-211ENST00000522802 FKBP5Q13451 457 aaPredicted RBP8.67□□□□□ -1.02
VPS13B-211ENST00000522802 STYK1Q6J9G0 422 aa8.67□□□□□ -1.02
VPS13B-211ENST00000522802 C1orf216Q8TAB5 229 aa8.67□□□□□ -1.02
VPS13B-211ENST00000522802 SNED1Q8TER0 1413 aa8.67□□□□□ -1.02
VPS13B-211ENST00000522802 ZDHHC3Q9NYG2 299 aa8.67□□□□□ -1.02
VPS13B-211ENST00000522802 ZNF232Q9UNY5 417 aa8.67□□□□□ -1.02
VPS13B-211ENST00000522802 CHMP3Q9Y3E7 222 aa8.67□□□□□ -1.02
VPS13B-211ENST00000522802 PPFIA3O75145 1194 aa8.66□□□□□ -1.02
VPS13B-211ENST00000522802 TXLNAP40222 546 aa8.66□□□□□ -1.02
VPS13B-211ENST00000522802 EIF5P55010 431 aaKnown RBP8.66□□□□□ -1.02
VPS13B-211ENST00000522802 SOX10P56693 466 aa8.66□□□□□ -1.02
VPS13B-211ENST00000522802 CCDC93Q567U6 631 aa8.66□□□□□ -1.02
VPS13B-211ENST00000522802 C1orf53Q5VUE5 145 aa8.66□□□□□ -1.02
VPS13B-211ENST00000522802 PNMA8AQ86V59 439 aaPredicted RBP8.66□□□□□ -1.02
VPS13B-211ENST00000522802 CNBD1Q8NA66 436 aa8.66□□□□□ -1.02
VPS13B-211ENST00000522802 GPR101Q96P66 508 aaPredicted RBP8.66□□□□□ -1.02
VPS13B-211ENST00000522802 LGR6Q9HBX8 967 aa8.66□□□□□ -1.02
VPS13B-211ENST00000522802 HCN4Q9Y3Q4 1203 aa8.66□□□□□ -1.02
VPS13B-211ENST00000522802 ATP4AP20648 1035 aa8.65□□□□□ -1.02
VPS13B-211ENST00000522802 ECE1P42892 770 aa8.65□□□□□ -1.02
VPS13B-211ENST00000522802 FKBP4Q02790 459 aaKnown RBP eCLIP8.65□□□□□ -1.02
VPS13B-211ENST00000522802 DGKZQ13574 1117 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms