RNA–Protein interactions for RNA: ENST00000522702.5

FAM49B-222, Transcript of family with sequence similarity 49 member B, human

TSL 4

Gene FAM49B, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-222	ENST00000522702	GLIS3	Q8NEA6	775 aa		6.23	□□□□□ -1.41
FAM49B-222	ENST00000522702	FAM129B	Q96TA1	746 aa		6.23	□□□□□ -1.41
FAM49B-222	ENST00000522702	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	6.23	□□□□□ -1.41
FAM49B-222	ENST00000522702	NDUFB5	O43674	189 aa		6.22	□□□□□ -1.41
FAM49B-222	ENST00000522702	RNGTT	O60942	597 aa	Known RBP	6.22	□□□□□ -1.41
FAM49B-222	ENST00000522702	ITPKA	P23677	461 aa		6.22	□□□□□ -1.41
FAM49B-222	ENST00000522702	ID3	Q02535	119 aa		6.22	□□□□□ -1.41
FAM49B-222	ENST00000522702	PTPN12	Q05209	780 aa	Known RBP	6.22	□□□□□ -1.41
FAM49B-222	ENST00000522702	CDK5R2	Q13319	367 aa		6.22	□□□□□ -1.41
FAM49B-222	ENST00000522702	FBLN7	Q53RD9	439 aa		6.22	□□□□□ -1.41
FAM49B-222	ENST00000522702	FBXO33	Q7Z6M2	555 aa		6.22	□□□□□ -1.41
FAM49B-222	ENST00000522702	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	6.22	□□□□□ -1.41
FAM49B-222	ENST00000522702	FAM181A	Q8N9Y4	354 aa		6.22	□□□□□ -1.41
FAM49B-222	ENST00000522702	CITED4	Q96RK1	184 aa		6.22	□□□□□ -1.41
FAM49B-222	ENST00000522702	ZC3H12C	Q9C0D7	883 aa	Known RBP	6.22	□□□□□ -1.41
FAM49B-222	ENST00000522702	MBNL3	Q9NUK0	354 aa	Known RBP	6.22	□□□□□ -1.41
FAM49B-222	ENST00000522702	CRIM1	Q9NZV1	1036 aa		6.22	□□□□□ -1.41
FAM49B-222	ENST00000522702	RNASE1	P07998	156 aa	Known RBP	6.21	□□□□□ -1.42
FAM49B-222	ENST00000522702	IFI16	Q16666	785 aa	Known RBP	6.21	□□□□□ -1.42
FAM49B-222	ENST00000522702	AOC3	Q16853	763 aa		6.21	□□□□□ -1.42
FAM49B-222	ENST00000522702	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	6.21	□□□□□ -1.42
FAM49B-222	ENST00000522702	USPL1	Q5W0Q7	1092 aa		6.21	□□□□□ -1.42
FAM49B-222	ENST00000522702	WFDC3	Q8IUB2	231 aa		6.21	□□□□□ -1.42
FAM49B-222	ENST00000522702	FANCD2OS	Q96PS1	177 aa		6.21	□□□□□ -1.42
FAM49B-222	ENST00000522702	MKNK2	Q9HBH9	465 aa		6.21	□□□□□ -1.42
FAM49B-222	ENST00000522702	PCOLCE2	Q9UKZ9	415 aa		6.21	□□□□□ -1.42
FAM49B-222	ENST00000522702	TMEM265	A0A087WTH1	108 aa		6.2	□□□□□ -1.42
FAM49B-222	ENST00000522702	UNCX	A6NJT0	531 aa		6.2	□□□□□ -1.42
FAM49B-222	ENST00000522702	GPR182	O15218	404 aa		6.2	□□□□□ -1.42
FAM49B-222	ENST00000522702	TMPRSS2	O15393	492 aa		6.2	□□□□□ -1.42
FAM49B-222	ENST00000522702	TREH	O43280	583 aa		6.2	□□□□□ -1.42
FAM49B-222	ENST00000522702	CPNE3	O75131	537 aa	Known RBP	6.2	□□□□□ -1.42
FAM49B-222	ENST00000522702	FMR1	Q06787	632 aa	Known RBP eCLIP	6.2	□□□□□ -1.42	1e-7	■■■■■ 41.2
FAM49B-222	ENST00000522702	PDE3B	Q13370	1112 aa		6.2	□□□□□ -1.42
FAM49B-222	ENST00000522702	DSC3	Q14574	896 aa		6.2	□□□□□ -1.42
FAM49B-222	ENST00000522702	WDR89	Q96FK6	387 aa	Predicted RBP	6.2	□□□□□ -1.42
FAM49B-222	ENST00000522702	HRASLS5	Q96KN8	279 aa		6.2	□□□□□ -1.42
FAM49B-222	ENST00000522702	KRTAP4-9	Q9BYQ8	210 aa		6.2	□□□□□ -1.42
FAM49B-222	ENST00000522702	CCDC86	Q9H6F5	360 aa	Known RBP	6.2	□□□□□ -1.42
FAM49B-222	ENST00000522702	SSU72	Q9NP77	194 aa	Known RBP	6.2	□□□□□ -1.42
FAM49B-222	ENST00000522702	GADD45B	O75293	160 aa	Predicted RBP	6.19	□□□□□ -1.42
FAM49B-222	ENST00000522702	HMGB1	P09429	215 aa	Known RBP	6.19	□□□□□ -1.42
FAM49B-222	ENST00000522702	ZNF16	P17020	682 aa	Predicted RBP	6.19	□□□□□ -1.42
FAM49B-222	ENST00000522702	ZNF157	P51786	506 aa	Predicted RBP	6.19	□□□□□ -1.42
FAM49B-222	ENST00000522702	ALKBH8	Q96BT7	664 aa	Known RBP	6.19	□□□□□ -1.42
FAM49B-222	ENST00000522702	BCL2L13	Q9BXK5	485 aa		6.19	□□□□□ -1.42
FAM49B-222	ENST00000522702	DISC1	Q9NRI5	854 aa		6.19	□□□□□ -1.42
FAM49B-222	ENST00000522702	TMEM238L	A0A1B0GVL6	79 aa		6.18	□□□□□ -1.42
FAM49B-222	ENST00000522702	P4HB	P07237	508 aa	Known RBP	6.18	□□□□□ -1.42
FAM49B-222	ENST00000522702	CD96	P40200	585 aa		6.18	□□□□□ -1.42
FAM49B-222	ENST00000522702	ANGEL2	Q5VTE6	544 aa	Known RBP	6.18	□□□□□ -1.42
FAM49B-222	ENST00000522702	LRRN4CL	Q8ND94	238 aa		6.18	□□□□□ -1.42
FAM49B-222	ENST00000522702	FAM84A	Q96KN4	292 aa		6.18	□□□□□ -1.42
FAM49B-222	ENST00000522702	DMRTB1	Q96MA1	342 aa		6.18	□□□□□ -1.42
FAM49B-222	ENST00000522702	NPHS2	Q9NP85	383 aa		6.18	□□□□□ -1.42
FAM49B-222	ENST00000522702	PPP4R2	Q9NY27	417 aa		6.18	□□□□□ -1.42
FAM49B-222	ENST00000522702	FAM53C	Q9NYF3	392 aa		6.18	□□□□□ -1.42
FAM49B-222	ENST00000522702	ADAMTS6	Q9UKP5	1117 aa		6.18	□□□□□ -1.42
FAM49B-222	ENST00000522702	TRAK1	Q9UPV9	953 aa		6.18	□□□□□ -1.42
FAM49B-222	ENST00000522702	ZNF862	O60290	1169 aa		6.17	□□□□□ -1.42
FAM49B-222	ENST00000522702	LEFTY1	O75610	366 aa		6.17	□□□□□ -1.42
FAM49B-222	ENST00000522702	HCLS1	P14317	486 aa	Predicted RBP	6.17	□□□□□ -1.42
FAM49B-222	ENST00000522702	CDK11B	P21127	795 aa	Known RBP	6.17	□□□□□ -1.42
FAM49B-222	ENST00000522702	OXCT1	P55809	520 aa		6.17	□□□□□ -1.42
FAM49B-222	ENST00000522702	TAGLN	Q01995	201 aa	Known RBP	6.17	□□□□□ -1.42
FAM49B-222	ENST00000522702	PPP2R3A	Q06190	1150 aa		6.17	□□□□□ -1.42
FAM49B-222	ENST00000522702	TTLL4	Q14679	1199 aa		6.17	□□□□□ -1.42
FAM49B-222	ENST00000522702	KIF4B	Q2VIQ3	1234 aa		6.17	□□□□□ -1.42
FAM49B-222	ENST00000522702	SLC23A3	Q6PIS1	610 aa		6.17	□□□□□ -1.42
FAM49B-222	ENST00000522702	GIPC2	Q8TF65	315 aa		6.17	□□□□□ -1.42
FAM49B-222	ENST00000522702	DUSP23	Q9BVJ7	150 aa		6.17	□□□□□ -1.42
FAM49B-222	ENST00000522702	KRT82	Q9NSB4	513 aa		6.17	□□□□□ -1.42
FAM49B-222	ENST00000522702	CDK11A	Q9UQ88	783 aa	Predicted RBP	6.17	□□□□□ -1.42
FAM49B-222	ENST00000522702	LRRC10B	A6NIK2	292 aa		6.16	□□□□□ -1.42
FAM49B-222	ENST00000522702	CEACAM5	P06731	702 aa		6.16	□□□□□ -1.42
FAM49B-222	ENST00000522702	GSTP1	P09211	210 aa	Known RBP	6.16	□□□□□ -1.42
FAM49B-222	ENST00000522702	HSP90B1	P14625	803 aa	Known RBP	6.16	□□□□□ -1.42
FAM49B-222	ENST00000522702	ORC1	Q13415	861 aa		6.16	□□□□□ -1.42
FAM49B-222	ENST00000522702	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	6.16	□□□□□ -1.42
FAM49B-222	ENST00000522702	TMC1	Q8TDI8	760 aa		6.16	□□□□□ -1.42
FAM49B-222	ENST00000522702	KCNB2	Q92953	911 aa		6.16	□□□□□ -1.42
FAM49B-222	ENST00000522702	CCDC74A	Q96AQ1	378 aa		6.16	□□□□□ -1.42
FAM49B-222	ENST00000522702	ABCB6	Q9NP58	842 aa		6.16	□□□□□ -1.42
FAM49B-222	ENST00000522702	KIAA1522	Q9P206	1035 aa	Predicted RBP	6.16	□□□□□ -1.42
FAM49B-222	ENST00000522702	SNX11	Q9Y5W9	270 aa		6.16	□□□□□ -1.42
FAM49B-222	ENST00000522702	ITIH2	P19823	946 aa		6.15	□□□□□ -1.42
FAM49B-222	ENST00000522702	KRTAP19-4	Q3LI73	84 aa		6.15	□□□□□ -1.42
FAM49B-222	ENST00000522702	PRPF40B	Q6NWY9	871 aa	Known RBP	6.15	□□□□□ -1.42
FAM49B-222	ENST00000522702	SPOCD1	Q6ZMY3	1216 aa		6.15	□□□□□ -1.42
FAM49B-222	ENST00000522702	ASB11	Q8WXH4	323 aa		6.15	□□□□□ -1.42
FAM49B-222	ENST00000522702	DNAJC25	Q9H1X3	360 aa		6.15	□□□□□ -1.42
FAM49B-222	ENST00000522702	PLAGL2	Q9UPG8	496 aa		6.15	□□□□□ -1.42
FAM49B-222	ENST00000522702	FAAP100	Q0VG06	881 aa		6.14	□□□□□ -1.43
FAM49B-222	ENST00000522702	KCNMB1	Q16558	191 aa		6.14	□□□□□ -1.43
FAM49B-222	ENST00000522702	EAPP	Q56P03	285 aa	Predicted RBP	6.14	□□□□□ -1.43
FAM49B-222	ENST00000522702	DTHD1	Q6ZMT9	781 aa		6.14	□□□□□ -1.43
FAM49B-222	ENST00000522702	ZSWIM9	Q86XI8	627 aa		6.14	□□□□□ -1.43
FAM49B-222	ENST00000522702	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	6.14	□□□□□ -1.43
FAM49B-222	ENST00000522702	TMEM39A	Q9NV64	488 aa		6.14	□□□□□ -1.43
FAM49B-222	ENST00000522702	GPN3	Q9UHW5	284 aa	Predicted RBP	6.14	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms