RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 CFPP27918 469 aa6.25□□□□□ -1.41
PCM1-214ENST00000521338 ANGEL2Q5VTE6 544 aaKnown RBP6.25□□□□□ -1.41
PCM1-214ENST00000521338 PDZD3Q86UT5 571 aa6.25□□□□□ -1.41
PCM1-214ENST00000521338 ZSWIM9Q86XI8 627 aa6.25□□□□□ -1.41
PCM1-214ENST00000521338 SNX11Q9Y5W9 270 aa6.25□□□□□ -1.41
PCM1-214ENST00000521338 TMEM238LA0A1B0GVL6 79 aa6.24□□□□□ -1.41
PCM1-214ENST00000521338 GSTP1P09211 210 aaKnown RBP6.24□□□□□ -1.41
PCM1-214ENST00000521338 ZNF157P51786 506 aaPredicted RBP6.24□□□□□ -1.41
PCM1-214ENST00000521338 ORC1Q13415 861 aa6.24□□□□□ -1.41
PCM1-214ENST00000521338 LCNL1Q6ZST4 164 aa6.24□□□□□ -1.41
PCM1-214ENST00000521338 CCDC97Q96F63 343 aaPredicted RBP6.24□□□□□ -1.41
PCM1-214ENST00000521338 FAM53CQ9NYF3 392 aa6.24□□□□□ -1.41
PCM1-214ENST00000521338 RNGTTO60942 597 aaKnown RBP6.23□□□□□ -1.41
PCM1-214ENST00000521338 ABL1P00519 1130 aa6.23□□□□□ -1.41
PCM1-214ENST00000521338 MLANAQ16655 118 aa6.23□□□□□ -1.41
PCM1-214ENST00000521338 ISL2Q96A47 359 aa6.23□□□□□ -1.41
PCM1-214ENST00000521338 CTNND2Q9UQB3 1225 aa6.23□□□□□ -1.41
PCM1-214ENST00000521338 CPNE3O75131 537 aaKnown RBP6.22□□□□□ -1.41
PCM1-214ENST00000521338 TSPAN15O95858 294 aa6.22□□□□□ -1.41
PCM1-214ENST00000521338 IGHA2P01877 340 aa6.22□□□□□ -1.41
PCM1-214ENST00000521338 KRT1P04264 644 aa6.22□□□□□ -1.41
PCM1-214ENST00000521338 FYB2Q5VWT5 728 aa6.22□□□□□ -1.41
PCM1-214ENST00000521338 SPACA3Q8IXA5 215 aa6.22□□□□□ -1.41
PCM1-214ENST00000521338 TOP6BLQ8N6T0 577 aa6.22□□□□□ -1.41
PCM1-214ENST00000521338 LIN37Q96GY3 246 aaPredicted RBP6.22□□□□□ -1.41
PCM1-214ENST00000521338 FAM129BQ96TA1 746 aa6.22□□□□□ -1.41
PCM1-214ENST00000521338 MTMR7Q9Y216 660 aa6.22□□□□□ -1.41
PCM1-214ENST00000521338 CARNS1A5YM72 827 aa6.21□□□□□ -1.42
PCM1-214ENST00000521338 ICMTO60725 284 aa6.21□□□□□ -1.42
PCM1-214ENST00000521338 NEFLP07196 543 aa6.21□□□□□ -1.42
PCM1-214ENST00000521338 ITIH2P19823 946 aa6.21□□□□□ -1.42
PCM1-214ENST00000521338 RAP1GAPP47736 663 aa6.21□□□□□ -1.42
PCM1-214ENST00000521338 KCNMB1Q16558 191 aa6.21□□□□□ -1.42
PCM1-214ENST00000521338 ZC3H12AQ5D1E8 599 aaKnown RBP6.21□□□□□ -1.42
PCM1-214ENST00000521338 STK35Q8TDR2 534 aa6.21□□□□□ -1.42
PCM1-214ENST00000521338 CCDC74AQ96AQ1 378 aa6.21□□□□□ -1.42
PCM1-214ENST00000521338 IGF2BP3O00425 579 aaKnown RBP eCLIP6.2□□□□□ -1.42
PCM1-214ENST00000521338 ARHGAP4P98171 946 aa6.2□□□□□ -1.42
PCM1-214ENST00000521338 NKPD1Q17RQ9 610 aa6.2□□□□□ -1.42
PCM1-214ENST00000521338 ARHGAP27Q6ZUM4 889 aa6.2□□□□□ -1.42
PCM1-214ENST00000521338 RNF214Q8ND24 703 aa6.2□□□□□ -1.42
PCM1-214ENST00000521338 ASB11Q8WXH4 323 aa6.2□□□□□ -1.42
PCM1-214ENST00000521338 TOX2Q96NM4 488 aa6.2□□□□□ -1.42
PCM1-214ENST00000521338 EGFL7Q9UHF1 273 aa6.2□□□□□ -1.42
PCM1-214ENST00000521338 NTF4P34130 210 aa6.19□□□□□ -1.42
PCM1-214ENST00000521338 ERVK-24P63145 666 aa6.19□□□□□ -1.42
PCM1-214ENST00000521338 ZP2Q05996 745 aa6.19□□□□□ -1.42
PCM1-214ENST00000521338 GRM2Q14416 872 aa6.19□□□□□ -1.42
PCM1-214ENST00000521338 SIAH1Q8IUQ4 282 aa6.19□□□□□ -1.42
PCM1-214ENST00000521338 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.19□□□□□ -1.42
PCM1-214ENST00000521338 CACNA2D2Q9NY47 1150 aa6.19□□□□□ -1.42
PCM1-214ENST00000521338 BRPF3Q9ULD4 1205 aa6.19□□□□□ -1.42
PCM1-214ENST00000521338 LILRA6Q6PI73 481 aa6.18□□□□□ -1.42
PCM1-214ENST00000521338 PRR23BQ6ZRT6 265 aa6.18□□□□□ -1.42
PCM1-214ENST00000521338 LRRC56Q8IYG6 542 aaPredicted RBP6.18□□□□□ -1.42
PCM1-214ENST00000521338 KRTAP9-3Q9BYQ3 159 aa6.18□□□□□ -1.42
PCM1-214ENST00000521338 DNAJC25Q9H1X3 360 aa6.18□□□□□ -1.42
PCM1-214ENST00000521338 C19orf73Q9NVV2 129 aa6.18□□□□□ -1.42
PCM1-214ENST00000521338 EIF1AYO14602 144 aaKnown RBP6.17□□□□□ -1.42
PCM1-214ENST00000521338 IKZF1Q13422 519 aa6.17□□□□□ -1.42
PCM1-214ENST00000521338 SYDE1Q6ZW31 735 aaPredicted RBP6.17□□□□□ -1.42
PCM1-214ENST00000521338 UBE3DQ7Z6J8 389 aa6.17□□□□□ -1.42
PCM1-214ENST00000521338 KCNB2Q92953 911 aa6.17□□□□□ -1.42
PCM1-214ENST00000521338 TMEM39AQ9NV64 488 aa6.17□□□□□ -1.42
PCM1-214ENST00000521338 PITPNM2Q9BZ72 1349 aa6.17□□□□□ -1.42
PCM1-214ENST00000521338 GPR182O15218 404 aa6.16□□□□□ -1.42
PCM1-214ENST00000521338 GADD45BO75293 160 aaPredicted RBP6.16□□□□□ -1.42
PCM1-214ENST00000521338 GLI1P08151 1106 aa6.16□□□□□ -1.42
PCM1-214ENST00000521338 C1QTNF9P0C862 333 aa6.16□□□□□ -1.42
PCM1-214ENST00000521338 AFMP43652 599 aa6.16□□□□□ -1.42
PCM1-214ENST00000521338 RING1Q06587 406 aa6.16□□□□□ -1.42
PCM1-214ENST00000521338 ZNF252P-AS1Q0IIN9 211 aa6.16□□□□□ -1.42
PCM1-214ENST00000521338 EPS8L3Q8TE67 593 aaKnown RBP6.16□□□□□ -1.42
PCM1-214ENST00000521338 PPP1R16BQ96T49 567 aa6.16□□□□□ -1.42
PCM1-214ENST00000521338 PRDM10Q9NQV6 1147 aa6.16□□□□□ -1.42
PCM1-214ENST00000521338 LMCD1Q9NZU5 365 aa6.16□□□□□ -1.42
PCM1-214ENST00000521338 GTF2IRD1Q9UHL9 959 aa6.16□□□□□ -1.42
PCM1-214ENST00000521338 TRAK1Q9UPV9 953 aa6.16□□□□□ -1.42
PCM1-214ENST00000521338 NCANO14594 1321 aa6.16□□□□□ -1.42
PCM1-214ENST00000521338 PRRG2O14669 202 aa6.15□□□□□ -1.42
PCM1-214ENST00000521338 PPP1R15AO75807 674 aaPredicted RBP6.15□□□□□ -1.42
PCM1-214ENST00000521338 EOMESO95936 686 aa6.15□□□□□ -1.42
PCM1-214ENST00000521338 ZSCAN22P10073 491 aaPredicted RBP6.15□□□□□ -1.42
PCM1-214ENST00000521338 ARNTP27540 789 aa6.15□□□□□ -1.42
PCM1-214ENST00000521338 PDE3BQ13370 1112 aa6.15□□□□□ -1.42
PCM1-214ENST00000521338 TTLL10Q6ZVT0 673 aa6.15□□□□□ -1.42
PCM1-214ENST00000521338 ANKLE2Q86XL3 938 aa6.15□□□□□ -1.42
PCM1-214ENST00000521338 ZSCAN18Q8TBC5 510 aaPredicted RBP6.15□□□□□ -1.42
PCM1-214ENST00000521338 GPBAR1Q8TDU6 330 aa6.15□□□□□ -1.42
PCM1-214ENST00000521338 CITED4Q96RK1 184 aa6.15□□□□□ -1.42
PCM1-214ENST00000521338 SSU72Q9NP77 194 aaKnown RBP6.15□□□□□ -1.42
PCM1-214ENST00000521338 ARID3CA6NKF2 412 aa6.14□□□□□ -1.43
PCM1-214ENST00000521338 CLCN7P51798 805 aa6.14□□□□□ -1.43
PCM1-214ENST00000521338 PPP2R3AQ06190 1150 aa6.14□□□□□ -1.43
PCM1-214ENST00000521338 MPRIPQ6WCQ1 1025 aa6.14□□□□□ -1.43
PCM1-214ENST00000521338 AMIGO3Q86WK7 504 aa6.14□□□□□ -1.43
PCM1-214ENST00000521338 SULF2Q8IWU5 870 aa6.14□□□□□ -1.43
PCM1-214ENST00000521338 NIF3L1Q9GZT8 377 aa6.14□□□□□ -1.43
PCM1-214ENST00000521338 SEMA3GQ9NS98 782 aa6.14□□□□□ -1.43
PCM1-214ENST00000521338 GPN3Q9UHW5 284 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms