RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 Q7L0L9 218 aa10.61□□□□□ -0.71
CTNNA1-215ENST00000519309 FASTKD5Q7L8L6 764 aaKnown RBP10.61□□□□□ -0.71
CTNNA1-215ENST00000519309 VPS37DQ86XT2 251 aa10.61□□□□□ -0.71
CTNNA1-215ENST00000519309 WWC1Q8IX03 1113 aa10.61□□□□□ -0.71
CTNNA1-215ENST00000519309 C7orf61Q8IZ16 206 aa10.61□□□□□ -0.71
CTNNA1-215ENST00000519309 KAZALD1Q96I82 304 aa10.61□□□□□ -0.71
CTNNA1-215ENST00000519309 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.61□□□□□ -0.71
CTNNA1-215ENST00000519309 PRKRIP1Q9H875 184 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-215ENST00000519309 DAGLAQ9Y4D2 1042 aa10.61□□□□□ -0.71
CTNNA1-215ENST00000519309 UTYO14607 1347 aa10.6□□□□□ -0.71
CTNNA1-215ENST00000519309 ALDH1L1O75891 902 aa10.6□□□□□ -0.71
CTNNA1-215ENST00000519309 MAGEA10P43363 369 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-215ENST00000519309 BCAMP50895 628 aa10.6□□□□□ -0.71
CTNNA1-215ENST00000519309 FAM110CQ1W6H9 321 aa10.6□□□□□ -0.71
CTNNA1-215ENST00000519309 RABL6Q3YEC7 729 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-215ENST00000519309 SCYL3Q8IZE3 742 aa10.6□□□□□ -0.71
CTNNA1-215ENST00000519309 LAMA2P24043 3122 aaKnown RBP10.6□□□□□ -0.71
CTNNA1-215ENST00000519309 PHF20L1A8MW92 1017 aa10.59□□□□□ -0.71
CTNNA1-215ENST00000519309 VAMP4O75379 141 aa10.59□□□□□ -0.71
CTNNA1-215ENST00000519309 PDE8BO95263 885 aa10.59□□□□□ -0.71
CTNNA1-215ENST00000519309 HMGCRP04035 888 aa10.59□□□□□ -0.71
CTNNA1-215ENST00000519309 PTPRAP18433 802 aa10.59□□□□□ -0.71
CTNNA1-215ENST00000519309 FGFR2P21802 821 aa10.59□□□□□ -0.71
CTNNA1-215ENST00000519309 NFIAQ12857 509 aa10.59□□□□□ -0.71
CTNNA1-215ENST00000519309 CDC42EP5Q6NZY7 148 aa10.59□□□□□ -0.71
CTNNA1-215ENST00000519309 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.59□□□□□ -0.71
CTNNA1-215ENST00000519309 SUCLG2Q96I99 432 aa10.59□□□□□ -0.71
CTNNA1-215ENST00000519309 FAM198AQ9UFP1 575 aa10.59□□□□□ -0.71
CTNNA1-215ENST00000519309 ZMYND8Q9ULU4 1186 aaPredicted RBP10.59□□□□□ -0.71
CTNNA1-215ENST00000519309 AFG3L2Q9Y4W6 797 aa10.59□□□□□ -0.71
CTNNA1-215ENST00000519309 EYSQ5T1H1 3165 aa10.59□□□□□ -0.71
CTNNA1-215ENST00000519309 FRAT2O75474 233 aaPredicted RBP10.58□□□□□ -0.72
CTNNA1-215ENST00000519309 MAP3K10Q02779 954 aa10.58□□□□□ -0.72
CTNNA1-215ENST00000519309 LRRC24Q50LG9 513 aa10.58□□□□□ -0.72
CTNNA1-215ENST00000519309 METTL24Q5JXM2 366 aa10.58□□□□□ -0.72
CTNNA1-215ENST00000519309 FAM109BQ6ICB4 259 aaPredicted RBP10.58□□□□□ -0.72
CTNNA1-215ENST00000519309 WDR66Q8TBY9 1149 aa10.58□□□□□ -0.72
CTNNA1-215ENST00000519309 SMCR8Q8TEV9 937 aaPredicted RBP10.58□□□□□ -0.72
CTNNA1-215ENST00000519309 COA7Q96BR5 231 aa10.58□□□□□ -0.72
CTNNA1-215ENST00000519309 NBPF3Q9H094 633 aa10.58□□□□□ -0.72
CTNNA1-215ENST00000519309 C9orf78Q9NZ63 289 aaPredicted RBP10.58□□□□□ -0.72
CTNNA1-215ENST00000519309 AGTPBP1Q9UPW5 1226 aa10.58□□□□□ -0.72
CTNNA1-215ENST00000519309 PFASO15067 1338 aa10.58□□□□□ -0.72
CTNNA1-215ENST00000519309 RPTORQ8N122 1335 aa10.58□□□□□ -0.72
CTNNA1-215ENST00000519309 ZBTB22O15209 634 aa10.57□□□□□ -0.72
CTNNA1-215ENST00000519309 TCP10Q12799 353 aa10.57□□□□□ -0.72
CTNNA1-215ENST00000519309 PUM3Q15397 648 aaKnown RBP10.57□□□□□ -0.72
CTNNA1-215ENST00000519309 DIXDC1Q155Q3 683 aa10.57□□□□□ -0.72
CTNNA1-215ENST00000519309 GADL1Q6ZQY3 521 aa10.57□□□□□ -0.72
CTNNA1-215ENST00000519309 GUCD1Q96NT3 240 aa10.57□□□□□ -0.72
CTNNA1-215ENST00000519309 IDI2Q9BXS1 227 aa10.57□□□□□ -0.72
CTNNA1-215ENST00000519309 SRCIN1Q9C0H9 1055 aa10.57□□□□□ -0.72
CTNNA1-215ENST00000519309 C11orf49Q9H6J7 331 aa10.57□□□□□ -0.72
CTNNA1-215ENST00000519309 SPINK5Q9NQ38 1064 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-215ENST00000519309 PICK1Q9NRD5 415 aa10.57□□□□□ -0.72
CTNNA1-215ENST00000519309 PNMA3Q9UL41 463 aa10.57□□□□□ -0.72
CTNNA1-215ENST00000519309 OGDHLQ9ULD0 1010 aa10.57□□□□□ -0.72
CTNNA1-215ENST00000519309 PRUNE2Q8WUY3 3088 aa10.57□□□□□ -0.72
CTNNA1-215ENST00000519309 SALL1Q9NSC2 1324 aa10.57□□□□□ -0.72
CTNNA1-215ENST00000519309 SIPA1L1O43166 1804 aa10.56□□□□□ -0.72
CTNNA1-215ENST00000519309 ENTPD3O75355 529 aa10.56□□□□□ -0.72
CTNNA1-215ENST00000519309 IFIT1P09914 478 aaKnown RBP10.56□□□□□ -0.72
CTNNA1-215ENST00000519309 COL6A1P12109 1028 aa10.56□□□□□ -0.72
CTNNA1-215ENST00000519309 SYN1P17600 705 aa10.56□□□□□ -0.72
CTNNA1-215ENST00000519309 PRDX5P30044 214 aa10.56□□□□□ -0.72
CTNNA1-215ENST00000519309 MAP3K21Q5TCX8 1036 aa10.56□□□□□ -0.72
CTNNA1-215ENST00000519309 ANKRD13CQ8N6S4 541 aa10.56□□□□□ -0.72
CTNNA1-215ENST00000519309 ANKRD44Q8N8A2 993 aa10.56□□□□□ -0.72
CTNNA1-215ENST00000519309 PROCA1Q8NCQ7 364 aaPredicted RBP10.56□□□□□ -0.72
CTNNA1-215ENST00000519309 UBE2OQ9C0C9 1292 aaKnown RBP10.56□□□□□ -0.72
CTNNA1-215ENST00000519309 BICC1Q9H694 974 aaKnown RBP10.56□□□□□ -0.72
CTNNA1-215ENST00000519309 HMX1Q9NP08 348 aaPredicted RBP10.56□□□□□ -0.72
CTNNA1-215ENST00000519309 ZHX2Q9Y6X8 837 aa10.56□□□□□ -0.72
CTNNA1-215ENST00000519309 GAKO14976 1311 aa10.56□□□□□ -0.72
CTNNA1-215ENST00000519309 CDH23Q9H251 3354 aa10.55□□□□□ -0.72
CTNNA1-215ENST00000519309 POTEB2H3BUK9 544 aa10.55□□□□□ -0.72
CTNNA1-215ENST00000519309 CTNND1O60716 968 aaKnown RBP10.55□□□□□ -0.72
CTNNA1-215ENST00000519309 NBPF7P0C2Y1 421 aaPredicted RBP10.55□□□□□ -0.72
CTNNA1-215ENST00000519309 GCLCP48506 637 aaPredicted RBP10.55□□□□□ -0.72
CTNNA1-215ENST00000519309 GJD2Q9UKL4 321 aa10.55□□□□□ -0.72
CTNNA1-215ENST00000519309 MUC3AQ02505 3323 aa10.55□□□□□ -0.72
CTNNA1-215ENST00000519309 RGS3P49796 1198 aa10.54□□□□□ -0.72
CTNNA1-215ENST00000519309 TREML2Q5T2D2 321 aa10.54□□□□□ -0.72
CTNNA1-215ENST00000519309 SH3BP5LQ7L8J4 393 aa10.54□□□□□ -0.72
CTNNA1-215ENST00000519309 ZFPM1Q8IX07 1006 aa10.54□□□□□ -0.72
CTNNA1-215ENST00000519309 TRIB2Q92519 343 aa10.54□□□□□ -0.72
CTNNA1-215ENST00000519309 LPIN2Q92539 896 aa10.54□□□□□ -0.72
CTNNA1-215ENST00000519309 TAOK2Q9UL54 1235 aa10.54□□□□□ -0.72
CTNNA1-215ENST00000519309 RLFQ13129 1914 aa10.54□□□□□ -0.72
CTNNA1-215ENST00000519309 FOCADQ5VW36 1801 aa10.54□□□□□ -0.72
CTNNA1-215ENST00000519309 CDK5RAP2Q96SN8 1893 aa10.53□□□□□ -0.72
CTNNA1-215ENST00000519309 TRIM75PA6NK02 468 aa10.53□□□□□ -0.72
CTNNA1-215ENST00000519309 LDHBP07195 334 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-215ENST00000519309 SLC5A1P13866 664 aa10.53□□□□□ -0.72
CTNNA1-215ENST00000519309 EXOSC9Q06265 439 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-215ENST00000519309 TRIM32Q13049 653 aa10.53□□□□□ -0.72
CTNNA1-215ENST00000519309 TBC1D2Q9BYX2 928 aa10.53□□□□□ -0.72
CTNNA1-215ENST00000519309 USP40Q9NVE5 1235 aa10.53□□□□□ -0.72
CTNNA1-215ENST00000519309 MORF4L1Q9UBU8 362 aa10.53□□□□□ -0.72
CTNNA1-215ENST00000519309 DNAH12Q6ZR08 3092 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms