RNA–Protein interactions for RNA: ENST00000518151.1

CSMD1-203, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-203ENST00000518151 ERVK-24P63145 666 aa8.21□□□□□ -1.1
CSMD1-203ENST00000518151 FMR1Q06787 632 aaKnown RBP eCLIP8.21□□□□□ -1.1
CSMD1-203ENST00000518151 C3orf58Q8NDZ4 430 aa8.21□□□□□ -1.1
CSMD1-203ENST00000518151 ACSBG1Q96GR2 724 aa8.21□□□□□ -1.1
CSMD1-203ENST00000518151 ASB16Q96NS5 453 aa8.21□□□□□ -1.1
CSMD1-203ENST00000518151 KRTAP4-12Q9BQ66 201 aa8.21□□□□□ -1.1
CSMD1-203ENST00000518151 CBX8Q9HC52 389 aa8.21□□□□□ -1.1
CSMD1-203ENST00000518151 SSU72Q9NP77 194 aaKnown RBP8.21□□□□□ -1.1
CSMD1-203ENST00000518151 HCLS1P14317 486 aaPredicted RBP8.2□□□□□ -1.1
CSMD1-203ENST00000518151 CDK5R2Q13319 367 aa8.2□□□□□ -1.1
CSMD1-203ENST00000518151 ZC3H12AQ5D1E8 599 aaKnown RBP8.2□□□□□ -1.1
CSMD1-203ENST00000518151 NECAB3Q96P71 396 aaPredicted RBP8.2□□□□□ -1.1
CSMD1-203ENST00000518151 SPG7Q9UQ90 795 aa8.2□□□□□ -1.1
CSMD1-203ENST00000518151 IVNS1ABPQ9Y6Y0 642 aa8.2□□□□□ -1.1
CSMD1-203ENST00000518151 ZNF252P-AS1Q0IIN9 211 aa8.19□□□□□ -1.1
CSMD1-203ENST00000518151 SCARA3Q6AZY7 606 aa8.19□□□□□ -1.1
CSMD1-203ENST00000518151 RNF214Q8ND24 703 aa8.19□□□□□ -1.1
CSMD1-203ENST00000518151 PAK6Q9NQU5 681 aaPredicted RBP8.19□□□□□ -1.1
CSMD1-203ENST00000518151 LRRC14Q15048 493 aa8.18□□□□□ -1.1
CSMD1-203ENST00000518151 TPTE2Q6XPS3 522 aa8.18□□□□□ -1.1
CSMD1-203ENST00000518151 NFXL1Q6ZNB6 911 aa8.18□□□□□ -1.1
CSMD1-203ENST00000518151 ARHGAP27Q6ZUM4 889 aa8.18□□□□□ -1.1
CSMD1-203ENST00000518151 CBLL1Q75N03 491 aa8.18□□□□□ -1.1
CSMD1-203ENST00000518151 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.18□□□□□ -1.1
CSMD1-203ENST00000518151 NETO1Q8TDF5 533 aa8.18□□□□□ -1.1
CSMD1-203ENST00000518151 STK35Q8TDR2 534 aa8.18□□□□□ -1.1
CSMD1-203ENST00000518151 GPBAR1Q8TDU6 330 aa8.18□□□□□ -1.1
CSMD1-203ENST00000518151 ANKRD24Q8TF21 1146 aa8.18□□□□□ -1.1
CSMD1-203ENST00000518151 BCL7CQ8WUZ0 217 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-203ENST00000518151 MKNK2Q9HBH9 465 aa8.18□□□□□ -1.1
CSMD1-203ENST00000518151 TRIM37O94972 964 aa8.17□□□□□ -1.1
CSMD1-203ENST00000518151 PICK1Q9NRD5 415 aa8.17□□□□□ -1.1
CSMD1-203ENST00000518151 ENC1O14682 589 aa8.16□□□□□ -1.1
CSMD1-203ENST00000518151 JUNBP17275 347 aaPredicted RBP8.16□□□□□ -1.1
CSMD1-203ENST00000518151 ISL2Q96A47 359 aa8.16□□□□□ -1.1
CSMD1-203ENST00000518151 ASIC4Q96FT7 647 aa8.16□□□□□ -1.1
CSMD1-203ENST00000518151 FRMD6Q96NE9 622 aa8.16□□□□□ -1.1
CSMD1-203ENST00000518151 DUSP23Q9BVJ7 150 aa8.16□□□□□ -1.1
CSMD1-203ENST00000518151 CACNA2D2Q9NY47 1150 aa8.16□□□□□ -1.1
CSMD1-203ENST00000518151 NEFMP07197 916 aa8.15□□□□□ -1.1
CSMD1-203ENST00000518151 LLGL2Q6P1M3 1020 aa8.15□□□□□ -1.1
CSMD1-203ENST00000518151 OSBPL7Q9BZF2 842 aa8.15□□□□□ -1.1
CSMD1-203ENST00000518151 FAM8A1Q9UBU6 413 aa8.15□□□□□ -1.1
CSMD1-203ENST00000518151 YBX3P16989 372 aaKnown RBP eCLIP8.14□□□□□ -1.11
CSMD1-203ENST00000518151 FGD1P98174 961 aa8.14□□□□□ -1.11
CSMD1-203ENST00000518151 PLCL1Q15111 1095 aa8.14□□□□□ -1.11
CSMD1-203ENST00000518151 IFI16Q16666 785 aaKnown RBP8.14□□□□□ -1.11
CSMD1-203ENST00000518151 LCE3BQ5TA77 95 aa8.14□□□□□ -1.11
CSMD1-203ENST00000518151 FAM181AQ8N9Y4 354 aa8.14□□□□□ -1.11
CSMD1-203ENST00000518151 C12orf49Q9H741 205 aa8.14□□□□□ -1.11
CSMD1-203ENST00000518151 VAV3Q9UKW4 847 aa8.14□□□□□ -1.11
CSMD1-203ENST00000518151 CYP8B1Q9UNU6 501 aa8.14□□□□□ -1.11
CSMD1-203ENST00000518151 FANCGO15287 622 aa8.13□□□□□ -1.11
CSMD1-203ENST00000518151 BMP6P22004 513 aa8.13□□□□□ -1.11
CSMD1-203ENST00000518151 PRKCQQ04759 706 aa8.13□□□□□ -1.11
CSMD1-203ENST00000518151 PLD6Q8N2A8 252 aaKnown RBP8.13□□□□□ -1.11
CSMD1-203ENST00000518151 TOP6BLQ8N6T0 577 aa8.13□□□□□ -1.11
CSMD1-203ENST00000518151 KCT2Q8NC54 265 aa8.13□□□□□ -1.11
CSMD1-203ENST00000518151 GTF2IRD1Q9UHL9 959 aa8.13□□□□□ -1.11
CSMD1-203ENST00000518151 TMEM265A0A087WTH1 108 aa8.12□□□□□ -1.11
CSMD1-203ENST00000518151 BIN1O00499 593 aa8.12□□□□□ -1.11
CSMD1-203ENST00000518151 FBXO24O75426 580 aa8.12□□□□□ -1.11
CSMD1-203ENST00000518151 CEACAM5P06731 702 aa8.12□□□□□ -1.11
CSMD1-203ENST00000518151 ITGB5P18084 799 aa8.12□□□□□ -1.11
CSMD1-203ENST00000518151 CDC37L1Q7L3B6 337 aa8.12□□□□□ -1.11
CSMD1-203ENST00000518151 KRTAP1-3Q8IUG1 177 aa8.12□□□□□ -1.11
CSMD1-203ENST00000518151 HRASLS5Q96KN8 279 aa8.12□□□□□ -1.11
CSMD1-203ENST00000518151 TRAIPQ9BWF2 469 aa8.12□□□□□ -1.11
CSMD1-203ENST00000518151 PAGE1O75459 146 aa8.11□□□□□ -1.11
CSMD1-203ENST00000518151 LEFTY1O75610 366 aa8.11□□□□□ -1.11
CSMD1-203ENST00000518151 KRTAP19-1Q8IUB9 90 aa8.11□□□□□ -1.11
CSMD1-203ENST00000518151 GRIN3AQ8TCU5 1115 aa8.11□□□□□ -1.11
CSMD1-203ENST00000518151 ELMO3Q96BJ8 720 aa8.11□□□□□ -1.11
CSMD1-203ENST00000518151 SETDB2Q96T68 719 aa8.11□□□□□ -1.11
CSMD1-203ENST00000518151 WWC3Q9ULE0 1092 aa8.11□□□□□ -1.11
CSMD1-203ENST00000518151 PCDHA4Q9UN74 947 aa8.11□□□□□ -1.11
CSMD1-203ENST00000518151 LDHBP07195 334 aaKnown RBP8.1□□□□□ -1.11
CSMD1-203ENST00000518151 P4HBP07237 508 aaKnown RBP8.1□□□□□ -1.11
CSMD1-203ENST00000518151 USP17L7P0C7H9 530 aa8.1□□□□□ -1.11
CSMD1-203ENST00000518151 OXCT1P55809 520 aa8.1□□□□□ -1.11
CSMD1-203ENST00000518151 COL19A1Q14993 1142 aa8.1□□□□□ -1.11
CSMD1-203ENST00000518151 ZNF792Q3KQV3 632 aa8.1□□□□□ -1.11
CSMD1-203ENST00000518151 PPM1JQ5JR12 505 aa8.1□□□□□ -1.11
CSMD1-203ENST00000518151 PCNX4Q63HM2 1172 aa8.1□□□□□ -1.11
CSMD1-203ENST00000518151 ZNF574Q6ZN55 896 aaPredicted RBP8.1□□□□□ -1.11
CSMD1-203ENST00000518151 SV2BQ7L1I2 683 aa8.1□□□□□ -1.11
CSMD1-203ENST00000518151 SPRED2Q7Z698 418 aa8.1□□□□□ -1.11
CSMD1-203ENST00000518151 PRDM10Q9NQV6 1147 aa8.1□□□□□ -1.11
CSMD1-203ENST00000518151 DCDC2CA8MYV0 355 aa8.09□□□□□ -1.11
CSMD1-203ENST00000518151 IGF2BP3O00425 579 aaKnown RBP eCLIP8.09□□□□□ -1.11
CSMD1-203ENST00000518151 FUT4P22083 530 aa8.09□□□□□ -1.11
CSMD1-203ENST00000518151 RING1Q06587 406 aa8.09□□□□□ -1.11
CSMD1-203ENST00000518151 ZBTB37Q5TC79 503 aa8.09□□□□□ -1.11
CSMD1-203ENST00000518151 TTF2Q9UNY4 1162 aaKnown RBP8.09□□□□□ -1.11
CSMD1-203ENST00000518151 SNX11Q9Y5W9 270 aa8.09□□□□□ -1.11
CSMD1-203ENST00000518151 CSADQ9Y600 493 aa8.09□□□□□ -1.11
CSMD1-203ENST00000518151 EIF4BP23588 611 aaKnown RBP8.08□□□□□ -1.12
CSMD1-203ENST00000518151 GNA15P30679 374 aa8.08□□□□□ -1.12
CSMD1-203ENST00000518151 BNIP3Q12983 259 aa8.08□□□□□ -1.12
CSMD1-203ENST00000518151 AOC3Q16853 763 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms