RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 USP17L1Q7RTZ2 530 aa7.43□□□□□ -1.22
LINC00535-202ENST00000517785 DEFB123Q8N688 67 aa7.43□□□□□ -1.22
LINC00535-202ENST00000517785 SYMPKQ92797 1274 aaKnown RBP7.43□□□□□ -1.22
LINC00535-202ENST00000517785 CCDC85AQ96PX6 553 aaPredicted RBP7.43□□□□□ -1.22
LINC00535-202ENST00000517785 REPIN1Q9BWE0 567 aaKnown RBP7.43□□□□□ -1.22
LINC00535-202ENST00000517785 STAP2Q9UGK3 403 aa7.43□□□□□ -1.22
LINC00535-202ENST00000517785 ATP5J2-PTCD1G3V325 749 aa7.42□□□□□ -1.22
LINC00535-202ENST00000517785 ZBTB7BO15156 539 aaPredicted RBP7.42□□□□□ -1.22
LINC00535-202ENST00000517785 ZBTB48P10074 688 aaPredicted RBP7.42□□□□□ -1.22
LINC00535-202ENST00000517785 JUNDP17535 347 aa7.42□□□□□ -1.22
LINC00535-202ENST00000517785 CLCN1P35523 988 aa7.42□□□□□ -1.22
LINC00535-202ENST00000517785 INHBEP58166 350 aa7.42□□□□□ -1.22
LINC00535-202ENST00000517785 RPS8P62241 208 aaKnown RBP7.42□□□□□ -1.22
LINC00535-202ENST00000517785 SF3B3Q15393 1217 aaKnown RBP7.42□□□□□ -1.22
LINC00535-202ENST00000517785 TAF1CQ15572 869 aaPredicted RBP7.42□□□□□ -1.22
LINC00535-202ENST00000517785 HSP90AB3PQ58FF7 597 aa7.42□□□□□ -1.22
LINC00535-202ENST00000517785 OTUD7BQ6GQQ9 843 aa7.42□□□□□ -1.22
LINC00535-202ENST00000517785 APOBEC3FQ8IUX4 373 aaKnown RBP7.42□□□□□ -1.22
LINC00535-202ENST00000517785 SPEF2Q9C093 1822 aa7.42□□□□□ -1.22
LINC00535-202ENST00000517785 ERBB4Q15303 1308 aa7.42□□□□□ -1.22
LINC00535-202ENST00000517785 ALPK3Q96L96 1907 aa7.42□□□□□ -1.22
LINC00535-202ENST00000517785 HTATSF1O43719 755 aaKnown RBP7.41□□□□□ -1.22
LINC00535-202ENST00000517785 WNT7BP56706 349 aa7.41□□□□□ -1.22
LINC00535-202ENST00000517785 KIAA0825Q8IV33 1275 aa7.41□□□□□ -1.22
LINC00535-202ENST00000517785 OGFOD1Q8N543 542 aa7.41□□□□□ -1.22
LINC00535-202ENST00000517785 PNISRQ8TF01 805 aaKnown RBP7.41□□□□□ -1.22
LINC00535-202ENST00000517785 HTATIP2Q9BUP3 242 aa7.41□□□□□ -1.22
LINC00535-202ENST00000517785 ELP3Q9H9T3 547 aa7.41□□□□□ -1.22
LINC00535-202ENST00000517785 ATP13A2Q9NQ11 1180 aa7.41□□□□□ -1.22
LINC00535-202ENST00000517785 PODXL2Q9NZ53 605 aa7.41□□□□□ -1.22
LINC00535-202ENST00000517785 PCDHAC2Q9Y5I4 1007 aa7.41□□□□□ -1.22
LINC00535-202ENST00000517785 NR2E3Q9Y5X4 410 aa7.41□□□□□ -1.22
LINC00535-202ENST00000517785 CLRN2A0PK11 232 aa7.4□□□□□ -1.22
LINC00535-202ENST00000517785 IRS4O14654 1257 aaPredicted RBP7.4□□□□□ -1.22
LINC00535-202ENST00000517785 PER1O15534 1290 aaPredicted RBP7.4□□□□□ -1.22
LINC00535-202ENST00000517785 WFS1O76024 890 aa7.4□□□□□ -1.22
LINC00535-202ENST00000517785 DACT2Q5SW24 774 aa7.4□□□□□ -1.22
LINC00535-202ENST00000517785 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.4□□□□□ -1.22
LINC00535-202ENST00000517785 BRI3BPQ8WY22 251 aa7.4□□□□□ -1.22
LINC00535-202ENST00000517785 JARID2Q92833 1246 aaPredicted RBP7.4□□□□□ -1.22
LINC00535-202ENST00000517785 HPS1Q92902 700 aa7.4□□□□□ -1.22
LINC00535-202ENST00000517785 OPTNQ96CV9 577 aa7.4□□□□□ -1.22
LINC00535-202ENST00000517785 CFAP53Q96M91 514 aa7.4□□□□□ -1.22
LINC00535-202ENST00000517785 DEFB129Q9H1M3 183 aa7.4□□□□□ -1.22
LINC00535-202ENST00000517785 ZFYVE28Q9HCC9 887 aa7.4□□□□□ -1.22
LINC00535-202ENST00000517785 TSPYL4Q9UJ04 414 aa7.4□□□□□ -1.22
LINC00535-202ENST00000517785 NUDCQ9Y266 331 aa7.4□□□□□ -1.22
LINC00535-202ENST00000517785 STXBP5LQ9Y2K9 1186 aa7.4□□□□□ -1.22
LINC00535-202ENST00000517785 XDHP47989 1333 aa7.39□□□□□ -1.23
LINC00535-202ENST00000517785 CCL15-CCL14A0A0B4J2E2 113 aa7.39□□□□□ -1.23
LINC00535-202ENST00000517785 PPP1R12BO60237 982 aaPredicted RBP7.39□□□□□ -1.23
LINC00535-202ENST00000517785 FARP2O94887 1054 aaPredicted RBP7.39□□□□□ -1.23
LINC00535-202ENST00000517785 NFX1Q12986 1120 aaKnown RBP7.39□□□□□ -1.23
LINC00535-202ENST00000517785 ARHGEF6Q15052 776 aa7.39□□□□□ -1.23
LINC00535-202ENST00000517785 MAP3K11Q16584 847 aa7.39□□□□□ -1.23
LINC00535-202ENST00000517785 CCL15Q16663 113 aa7.39□□□□□ -1.23
LINC00535-202ENST00000517785 NBPF12Q5TAG4 269 aaPredicted RBP7.39□□□□□ -1.23
LINC00535-202ENST00000517785 PODNQ7Z5L7 613 aa7.39□□□□□ -1.23
LINC00535-202ENST00000517785 UBE2Q1Q7Z7E8 422 aa7.39□□□□□ -1.23
LINC00535-202ENST00000517785 RETREG3Q86VR2 466 aa7.39□□□□□ -1.23
LINC00535-202ENST00000517785 FAM43AQ8N2R8 423 aa7.39□□□□□ -1.23
LINC00535-202ENST00000517785 VEZTQ9HBM0 779 aa7.39□□□□□ -1.23
LINC00535-202ENST00000517785 RAPGEFL1Q9UHV5 662 aa7.39□□□□□ -1.23
LINC00535-202ENST00000517785 ECM29Q5VYK3 1845 aa7.38□□□□□ -1.23
LINC00535-202ENST00000517785 EYSQ5T1H1 3165 aa7.38□□□□□ -1.23
LINC00535-202ENST00000517785 AOX1Q06278 1338 aa7.38□□□□□ -1.23
LINC00535-202ENST00000517785 A0A1W2PPC1 479 aa7.38□□□□□ -1.23
LINC00535-202ENST00000517785 F8W031 263 aaPredicted RBP7.38□□□□□ -1.23
LINC00535-202ENST00000517785 CCL5P13501 91 aa7.38□□□□□ -1.23
LINC00535-202ENST00000517785 ATP2B4P23634 1241 aa7.38□□□□□ -1.23
LINC00535-202ENST00000517785 IREB2P48200 963 aaKnown RBP7.38□□□□□ -1.23
LINC00535-202ENST00000517785 LACTBP83111 547 aaPredicted RBP7.38□□□□□ -1.23
LINC00535-202ENST00000517785 KRT24Q2M2I5 525 aa7.38□□□□□ -1.23
LINC00535-202ENST00000517785 PTCRAQ6ISU1 281 aaPredicted RBP7.38□□□□□ -1.23
LINC00535-202ENST00000517785 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.38□□□□□ -1.23
LINC00535-202ENST00000517785 RNF208Q9H0X6 261 aa7.38□□□□□ -1.23
LINC00535-202ENST00000517785 MTMR10Q9NXD2 777 aa7.38□□□□□ -1.23
LINC00535-202ENST00000517785 BIN2Q9UBW5 565 aaPredicted RBP7.38□□□□□ -1.23
LINC00535-202ENST00000517785 ZMYND8Q9ULU4 1186 aaPredicted RBP7.38□□□□□ -1.23
LINC00535-202ENST00000517785 PCDHGC3Q9UN70 934 aa7.38□□□□□ -1.23
LINC00535-202ENST00000517785 COL1A1P02452 1464 aaPredicted RBP7.37□□□□□ -1.23
LINC00535-202ENST00000517785 USP2O75604 605 aaPredicted RBP7.37□□□□□ -1.23
LINC00535-202ENST00000517785 FDX1P10109 184 aa7.37□□□□□ -1.23
LINC00535-202ENST00000517785 SNRPBP14678 240 aaKnown RBP7.37□□□□□ -1.23
LINC00535-202ENST00000517785 KLRK1P26718 216 aa7.37□□□□□ -1.23
LINC00535-202ENST00000517785 CTGFP29279 349 aa7.37□□□□□ -1.23
LINC00535-202ENST00000517785 GJA8P48165 433 aa7.37□□□□□ -1.23
LINC00535-202ENST00000517785 KIF22Q14807 665 aa7.37□□□□□ -1.23
LINC00535-202ENST00000517785 TXNRD3Q86VQ6 643 aa7.37□□□□□ -1.23
LINC00535-202ENST00000517785 ANKRD13AQ8IZ07 590 aa7.37□□□□□ -1.23
LINC00535-202ENST00000517785 KRI1Q8N9T8 703 aaKnown RBP7.37□□□□□ -1.23
LINC00535-202ENST00000517785 RAET1EQ8TD07 263 aa7.37□□□□□ -1.23
LINC00535-202ENST00000517785 ZBED3Q96IU2 234 aaPredicted RBP7.37□□□□□ -1.23
LINC00535-202ENST00000517785 NUDT12Q9BQG2 462 aa7.37□□□□□ -1.23
LINC00535-202ENST00000517785 ISCA1Q9BUE6 129 aa7.37□□□□□ -1.23
LINC00535-202ENST00000517785 PRDM6Q9NQX0 595 aa7.37□□□□□ -1.23
LINC00535-202ENST00000517785 CHPF2Q9P2E5 772 aa7.37□□□□□ -1.23
LINC00535-202ENST00000517785 MED23Q9ULK4 1368 aa7.36□□□□□ -1.23
LINC00535-202ENST00000517785 MYO3BQ8WXR4 1341 aa7.36□□□□□ -1.23
LINC00535-202ENST00000517785 GJB1P08034 283 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms