RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 HIF1AQ16665 826 aa1.5□□□□□ -2.17
RNU6-539P-201ENST00000516665 RALGPS1Q5JS13 557 aa1.5□□□□□ -2.17
RNU6-539P-201ENST00000516665 P3H3Q8IVL6 736 aa1.5□□□□□ -2.17
RNU6-539P-201ENST00000516665 BBXQ8WY36 941 aaPredicted RBP1.5□□□□□ -2.17
RNU6-539P-201ENST00000516665 INTS4Q96HW7 963 aaKnown RBP1.5□□□□□ -2.17
RNU6-539P-201ENST00000516665 POP1Q99575 1024 aaKnown RBP1.5□□□□□ -2.17
RNU6-539P-201ENST00000516665 DUSP23Q9BVJ7 150 aa1.5□□□□□ -2.17
RNU6-539P-201ENST00000516665 TRIM8Q9BZR9 551 aa1.5□□□□□ -2.17
RNU6-539P-201ENST00000516665 DNAJC25Q9H1X3 360 aa1.5□□□□□ -2.17
RNU6-539P-201ENST00000516665 C19orf44Q9H6X5 657 aa1.5□□□□□ -2.17
RNU6-539P-201ENST00000516665 AP4E1Q9UPM8 1137 aa1.5□□□□□ -2.17
RNU6-539P-201ENST00000516665 PDE6BP35913 854 aa1.49□□□□□ -2.17
RNU6-539P-201ENST00000516665 AKAP4Q5JQC9 854 aa1.49□□□□□ -2.17
RNU6-539P-201ENST00000516665 TREML1Q86YW5 311 aa1.49□□□□□ -2.17
RNU6-539P-201ENST00000516665 PALM2Q8IXS6 379 aa1.49□□□□□ -2.17
RNU6-539P-201ENST00000516665 ADGRG2Q8IZP9 1017 aa1.49□□□□□ -2.17
RNU6-539P-201ENST00000516665 CCDC120Q96HB5 630 aa1.49□□□□□ -2.17
RNU6-539P-201ENST00000516665 NGLY1Q96IV0 654 aa1.49□□□□□ -2.17
RNU6-539P-201ENST00000516665 SPATA25Q9BR10 227 aa1.49□□□□□ -2.17
RNU6-539P-201ENST00000516665 PBX4Q9BYU1 374 aa1.49□□□□□ -2.17
RNU6-539P-201ENST00000516665 TSPAN10Q9H1Z9 355 aaPredicted RBP1.49□□□□□ -2.17
RNU6-539P-201ENST00000516665 GSX1Q9H4S2 264 aaPredicted RBP1.49□□□□□ -2.17
RNU6-539P-201ENST00000516665 UNKLQ9H9P5 680 aaKnown RBP1.49□□□□□ -2.17
RNU6-539P-201ENST00000516665 SP110Q9HB58 689 aa1.49□□□□□ -2.17
RNU6-539P-201ENST00000516665 C11orf16Q9NQ32 467 aa1.49□□□□□ -2.17
RNU6-539P-201ENST00000516665 ZNF330Q9Y3S2 320 aaPredicted RBP1.49□□□□□ -2.17
RNU6-539P-201ENST00000516665 A0A1B0GTL3 188 aa1.48□□□□□ -2.17
RNU6-539P-201ENST00000516665 XYLBO75191 536 aa1.48□□□□□ -2.17
RNU6-539P-201ENST00000516665 ARL4DP49703 201 aa1.48□□□□□ -2.17
RNU6-539P-201ENST00000516665 ARSDP51689 593 aa1.48□□□□□ -2.17
RNU6-539P-201ENST00000516665 RING1Q06587 406 aa1.48□□□□□ -2.17
RNU6-539P-201ENST00000516665 NPAS4Q8IUM7 802 aa1.48□□□□□ -2.17
RNU6-539P-201ENST00000516665 AMER2Q8N7J2 671 aa1.48□□□□□ -2.17
RNU6-539P-201ENST00000516665 AGAP2Q99490 1192 aa1.48□□□□□ -2.17
RNU6-539P-201ENST00000516665 SOX1O00570 391 aaPredicted RBP1.47□□□□□ -2.17
RNU6-539P-201ENST00000516665 CLCN7P51798 805 aa1.47□□□□□ -2.17
RNU6-539P-201ENST00000516665 SRSF3P84103 164 aaKnown RBP1.47□□□□□ -2.17
RNU6-539P-201ENST00000516665 ABHD18Q0P651 414 aa1.47□□□□□ -2.17
RNU6-539P-201ENST00000516665 SPACA7Q96KW9 195 aa1.47□□□□□ -2.17
RNU6-539P-201ENST00000516665 NECAB3Q96P71 396 aaPredicted RBP1.47□□□□□ -2.17
RNU6-539P-201ENST00000516665 KLC2Q9H0B6 622 aa1.47□□□□□ -2.17
RNU6-539P-201ENST00000516665 CNTD2Q9H8S5 307 aa1.47□□□□□ -2.17
RNU6-539P-201ENST00000516665 CHIC2Q9UKJ5 165 aa1.47□□□□□ -2.17
RNU6-539P-201ENST00000516665 PCDHGA11Q9Y5H2 935 aa1.47□□□□□ -2.17
RNU6-539P-201ENST00000516665 CTSBP07858 339 aa1.46□□□□□ -2.18
RNU6-539P-201ENST00000516665 LNPKQ9C0E8 428 aa1.46□□□□□ -2.18
RNU6-539P-201ENST00000516665 TMEM59LQ9UK28 342 aa1.46□□□□□ -2.18
RNU6-539P-201ENST00000516665 CHMP3Q9Y3E7 222 aa1.46□□□□□ -2.18
RNU6-539P-201ENST00000516665 CDR1P51861 262 aa1.45□□□□□ -2.18
RNU6-539P-201ENST00000516665 MVKQ03426 396 aa1.45□□□□□ -2.18
RNU6-539P-201ENST00000516665 HYAL2Q12891 473 aa1.45□□□□□ -2.18
RNU6-539P-201ENST00000516665 TBC1D10BQ4KMP7 808 aaPredicted RBP1.45□□□□□ -2.18
RNU6-539P-201ENST00000516665 SPDYAQ5MJ70 313 aa1.45□□□□□ -2.18
RNU6-539P-201ENST00000516665 MICALCLQ6ZW33 695 aa1.45□□□□□ -2.18
RNU6-539P-201ENST00000516665 FAM214BQ7L5A3 538 aa1.45□□□□□ -2.18
RNU6-539P-201ENST00000516665 TOP6BLQ8N6T0 577 aa1.45□□□□□ -2.18
RNU6-539P-201ENST00000516665 C1orf127Q8N9H9 656 aa1.45□□□□□ -2.18
RNU6-539P-201ENST00000516665 C9orf106Q8NAJ2 232 aa1.45□□□□□ -2.18
RNU6-539P-201ENST00000516665 SSBP3Q9BWW4 388 aaPredicted RBP1.45□□□□□ -2.18
RNU6-539P-201ENST00000516665 SIRT5Q9NXA8 310 aa1.45□□□□□ -2.18
RNU6-539P-201ENST00000516665 YBX2Q9Y2T7 364 aaKnown RBP1.45□□□□□ -2.18
RNU6-539P-201ENST00000516665 RTCBQ9Y3I0 505 aaKnown RBP1.45□□□□□ -2.18
RNU6-539P-201ENST00000516665 PLATP00750 562 aa1.44□□□□□ -2.18
RNU6-539P-201ENST00000516665 HOXB6P17509 224 aaKnown RBP1.44□□□□□ -2.18
RNU6-539P-201ENST00000516665 GALK1P51570 392 aa1.44□□□□□ -2.18
RNU6-539P-201ENST00000516665 KRTAP27-1Q3LI81 207 aa1.44□□□□□ -2.18
RNU6-539P-201ENST00000516665 SLFNL1Q499Z3 407 aa1.44□□□□□ -2.18
RNU6-539P-201ENST00000516665 TMPRSS7Q7RTY8 843 aa1.44□□□□□ -2.18
RNU6-539P-201ENST00000516665 Q96M66 194 aa1.44□□□□□ -2.18
RNU6-539P-201ENST00000516665 HSPA12BQ96MM6 686 aa1.44□□□□□ -2.18
RNU6-539P-201ENST00000516665 SOX13Q9UN79 622 aa1.44□□□□□ -2.18
RNU6-539P-201ENST00000516665 NOBOXO60393 691 aa1.43□□□□□ -2.18
RNU6-539P-201ENST00000516665 AOC2O75106 756 aa1.43□□□□□ -2.18
RNU6-539P-201ENST00000516665 ZNF202O95125 648 aa1.43□□□□□ -2.18
RNU6-539P-201ENST00000516665 MAPK7Q13164 816 aa1.43□□□□□ -2.18
RNU6-539P-201ENST00000516665 ICAM4Q14773 271 aa1.43□□□□□ -2.18
RNU6-539P-201ENST00000516665 LDLRAD3Q86YD5 345 aa1.43□□□□□ -2.18
RNU6-539P-201ENST00000516665 IGDCC3Q8IVU1 814 aa1.43□□□□□ -2.18
RNU6-539P-201ENST00000516665 OR13H1Q8NG92 308 aa1.43□□□□□ -2.18
RNU6-539P-201ENST00000516665 MZB1Q8WU39 189 aa1.43□□□□□ -2.18
RNU6-539P-201ENST00000516665 GJD4Q96KN9 370 aaPredicted RBP1.43□□□□□ -2.18
RNU6-539P-201ENST00000516665 CFAP44Q96MT7 982 aa1.43□□□□□ -2.18
RNU6-539P-201ENST00000516665 CDK5RAP1Q96SZ6 601 aaKnown RBP1.43□□□□□ -2.18
RNU6-539P-201ENST00000516665 NRSN2Q9GZP1 204 aa1.43□□□□□ -2.18
RNU6-539P-201ENST00000516665 KLK14Q9P0G3 267 aa1.43□□□□□ -2.18
RNU6-539P-201ENST00000516665 MASP2O00187 686 aa1.42□□□□□ -2.18
RNU6-539P-201ENST00000516665 GPR37L1O60883 481 aa1.42□□□□□ -2.18
RNU6-539P-201ENST00000516665 ZNF585AQ6P3V2 769 aa1.42□□□□□ -2.18
RNU6-539P-201ENST00000516665 PCSK4Q6UW60 755 aa1.42□□□□□ -2.18
RNU6-539P-201ENST00000516665 LIPIQ6XZB0 460 aa1.42□□□□□ -2.18
RNU6-539P-201ENST00000516665 LIMS2Q7Z4I7 341 aa1.42□□□□□ -2.18
RNU6-539P-201ENST00000516665 RGL4Q8IZJ4 473 aa1.42□□□□□ -2.18
RNU6-539P-201ENST00000516665 CMTR1Q8N1G2 835 aaKnown RBP1.42□□□□□ -2.18
RNU6-539P-201ENST00000516665 CEP120Q8N960 986 aa1.42□□□□□ -2.18
RNU6-539P-201ENST00000516665 ADAMTS10Q9H324 1103 aa1.42□□□□□ -2.18
RNU6-539P-201ENST00000516665 CWC22Q9HCG8 908 aaKnown RBP1.42□□□□□ -2.18
RNU6-539P-201ENST00000516665 ADARB2Q9NS39 739 aaKnown RBP1.42□□□□□ -2.18
RNU6-539P-201ENST00000516665 KCNMB2Q9Y691 235 aa1.42□□□□□ -2.18
RNU6-539P-201ENST00000516665 H3BS24 57 aa1.41□□□□□ -2.18
RNU6-539P-201ENST00000516665 C21orf2O43822 256 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms