RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ATP13A1Q9HD20 1204 aa1.02□□□□□ -2.25
RNU6-542P-201ENST00000516405 USP40Q9NVE5 1235 aa1.02□□□□□ -2.25
RNU6-542P-201ENST00000516405 ZFR2Q9UPR6 939 aaKnown RBP1.02□□□□□ -2.25
RNU6-542P-201ENST00000516405 SETD1BQ9UPS6 1966 aaKnown RBP1.02□□□□□ -2.25
RNU6-542P-201ENST00000516405 ERVV-2B6SEH9 535 aa1.01□□□□□ -2.25
RNU6-542P-201ENST00000516405 CTSBP07858 339 aa1.01□□□□□ -2.25
RNU6-542P-201ENST00000516405 PTPRAP18433 802 aa1.01□□□□□ -2.25
RNU6-542P-201ENST00000516405 LTKP29376 864 aa1.01□□□□□ -2.25
RNU6-542P-201ENST00000516405 MRPS21P82921 87 aaKnown RBP1.01□□□□□ -2.25
RNU6-542P-201ENST00000516405 HIF1AQ16665 826 aa1.01□□□□□ -2.25
RNU6-542P-201ENST00000516405 P3H3Q8IVL6 736 aa1.01□□□□□ -2.25
RNU6-542P-201ENST00000516405 ADGRG2Q8IZP9 1017 aa1.01□□□□□ -2.25
RNU6-542P-201ENST00000516405 AMER2Q8N7J2 671 aa1.01□□□□□ -2.25
RNU6-542P-201ENST00000516405 AGAP2Q99490 1192 aa1.01□□□□□ -2.25
RNU6-542P-201ENST00000516405 PBX4Q9BYU1 374 aa1.01□□□□□ -2.25
RNU6-542P-201ENST00000516405 TRIM8Q9BZR9 551 aa1.01□□□□□ -2.25
RNU6-542P-201ENST00000516405 SLC6A17Q9H1V8 727 aa1.01□□□□□ -2.25
RNU6-542P-201ENST00000516405 TSPAN10Q9H1Z9 355 aaPredicted RBP1.01□□□□□ -2.25
RNU6-542P-201ENST00000516405 XYLBO75191 536 aa1□□□□□ -2.25
RNU6-542P-201ENST00000516405 ARSDP51689 593 aa1□□□□□ -2.25
RNU6-542P-201ENST00000516405 HK2P52789 917 aa1□□□□□ -2.25
RNU6-542P-201ENST00000516405 CABP4P57796 275 aa1□□□□□ -2.25
RNU6-542P-201ENST00000516405 SRSF3P84103 164 aaKnown RBP1□□□□□ -2.25
RNU6-542P-201ENST00000516405 TBC1D10BQ4KMP7 808 aaPredicted RBP1□□□□□ -2.25
RNU6-542P-201ENST00000516405 AKAP4Q5JQC9 854 aa1□□□□□ -2.25
RNU6-542P-201ENST00000516405 PCSK4Q6UW60 755 aa1□□□□□ -2.25
RNU6-542P-201ENST00000516405 TREML1Q86YW5 311 aa1□□□□□ -2.25
RNU6-542P-201ENST00000516405 C9orf106Q8NAJ2 232 aa1□□□□□ -2.25
RNU6-542P-201ENST00000516405 CCDC120Q96HB5 630 aa1□□□□□ -2.25
RNU6-542P-201ENST00000516405 INTS4Q96HW7 963 aaKnown RBP1□□□□□ -2.25
RNU6-542P-201ENST00000516405 GJD4Q96KN9 370 aaPredicted RBP1□□□□□ -2.25
RNU6-542P-201ENST00000516405 NECAB3Q96P71 396 aaPredicted RBP1□□□□□ -2.25
RNU6-542P-201ENST00000516405 SPATA25Q9BR10 227 aa1□□□□□ -2.25
RNU6-542P-201ENST00000516405 NRSN2Q9GZP1 204 aa1□□□□□ -2.25
RNU6-542P-201ENST00000516405 CNTD2Q9H8S5 307 aa1□□□□□ -2.25
RNU6-542P-201ENST00000516405 SLAMF8Q9P0V8 285 aa1□□□□□ -2.25
RNU6-542P-201ENST00000516405 HMCN1Q96RW7 5635 aa1□□□□□ -2.25
RNU6-542P-201ENST00000516405 A0A1B0GTL3 188 aa0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 IKBKBO14920 756 aa0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 NOBOXO60393 691 aa0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 GPR37L1O60883 481 aa0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 PDE6BP35913 854 aa0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 ARL4DP49703 201 aa0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 ZC3H6P61129 1189 aaKnown RBP0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 MVKQ03426 396 aa0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 MICALCLQ6ZW33 695 aa0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 CEP120Q8N960 986 aa0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 OR13H1Q8NG92 308 aa0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 ZNF341Q9BYN7 854 aa0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 LNPKQ9C0E8 428 aa0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 KLC2Q9H0B6 622 aa0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 UNKLQ9H9P5 680 aaKnown RBP0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 YBX2Q9Y2T7 364 aaKnown RBP0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 RTCBQ9Y3I0 505 aaKnown RBP0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 ZNF330Q9Y3S2 320 aaPredicted RBP0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 KCNMB2Q9Y691 235 aa0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 NOTCH3Q9UM47 2321 aa0.99□□□□□ -2.25
RNU6-542P-201ENST00000516405 C21orf2O43822 256 aa0.98□□□□□ -2.25
RNU6-542P-201ENST00000516405 KIF4AO95239 1232 aa0.98□□□□□ -2.25
RNU6-542P-201ENST00000516405 CLCN7P51798 805 aa0.98□□□□□ -2.25
RNU6-542P-201ENST00000516405 COLEC12Q5KU26 742 aa0.98□□□□□ -2.25
RNU6-542P-201ENST00000516405 LDLRAD3Q86YD5 345 aa0.98□□□□□ -2.25
RNU6-542P-201ENST00000516405 IGDCC3Q8IVU1 814 aa0.98□□□□□ -2.25
RNU6-542P-201ENST00000516405 PALM2Q8IXS6 379 aa0.98□□□□□ -2.25
RNU6-542P-201ENST00000516405 NGLY1Q96IV0 654 aa0.98□□□□□ -2.25
RNU6-542P-201ENST00000516405 SPACA7Q96KW9 195 aa0.98□□□□□ -2.25
RNU6-542P-201ENST00000516405 Q96M66 194 aa0.98□□□□□ -2.25
RNU6-542P-201ENST00000516405 HSPA12BQ96MM6 686 aa0.98□□□□□ -2.25
RNU6-542P-201ENST00000516405 ADAMTS10Q9H324 1103 aa0.98□□□□□ -2.25
RNU6-542P-201ENST00000516405 TMEM59LQ9UK28 342 aa0.98□□□□□ -2.25
RNU6-542P-201ENST00000516405 SOX13Q9UN79 622 aa0.98□□□□□ -2.25
RNU6-542P-201ENST00000516405 AP4E1Q9UPM8 1137 aa0.98□□□□□ -2.25
RNU6-542P-201ENST00000516405 NFKBIEO00221 500 aa0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 IGF2BP3O00425 579 aaKnown RBP eCLIP0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 PLATP00750 562 aa0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 GALK1P51570 392 aa0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 CDR1P51861 262 aa0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 COL10A1Q03692 680 aa0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 ABHD18Q0P651 414 aa0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 HYAL2Q12891 473 aa0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 MAPK7Q13164 816 aa0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 ICAM4Q14773 271 aa0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 R3HDM1Q15032 1099 aaKnown RBP0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 VWA3BQ502W6 1294 aa0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 SPDYAQ5MJ70 313 aa0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 PROCA1Q8NCQ7 364 aaPredicted RBP0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 BBC3Q96PG8 261 aaPredicted RBP0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 GNL3Q9BVP2 549 aaKnown RBP eCLIP0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 CD248Q9HCU0 757 aa0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 SIRT5Q9NXA8 310 aa0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 KLK14Q9P0G3 267 aa0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 PPP1R9AQ9ULJ8 1098 aa0.97□□□□□ -2.25
RNU6-542P-201ENST00000516405 FAM177BA6PVY3 158 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 RBAK-RBAKDNI3L0D1 243 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 NARSO43776 548 aaKnown RBP0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 AOC2O75106 756 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 MICAL2O94851 1124 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 CEBPAP49715 358 aaPredicted RBP0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 CAP1Q01518 475 aa0.96□□□□□ -2.26
RNU6-542P-201ENST00000516405 PLCB3Q01970 1234 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms