RNA–Protein interactions for RNA: ENST00000516257.1

RNU2-53P-201, Transcript of RNA, U2 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU2-53P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-53P-201ENST00000516257 TTLL4Q14679 1199 aa4.89□□□□□ -1.63
RNU2-53P-201ENST00000516257 ANKLE2Q86XL3 938 aa4.89□□□□□ -1.63
RNU2-53P-201ENST00000516257 SIAH1Q8IUQ4 282 aa4.89□□□□□ -1.63
RNU2-53P-201ENST00000516257 GJD3Q8N144 294 aa4.89□□□□□ -1.63
RNU2-53P-201ENST00000516257 TOP6BLQ8N6T0 577 aa4.89□□□□□ -1.63
RNU2-53P-201ENST00000516257 DDX54Q8TDD1 881 aaKnown RBP4.89□□□□□ -1.63
RNU2-53P-201ENST00000516257 DISC1Q9NRI5 854 aa4.89□□□□□ -1.63
RNU2-53P-201ENST00000516257 PCDHGC5Q9Y5F6 944 aa4.89□□□□□ -1.63
RNU2-53P-201ENST00000516257 RNGTTO60942 597 aaKnown RBP4.88□□□□□ -1.63
RNU2-53P-201ENST00000516257 USP5P45974 858 aa4.88□□□□□ -1.63
RNU2-53P-201ENST00000516257 ZP2Q05996 745 aa4.88□□□□□ -1.63
RNU2-53P-201ENST00000516257 AP3B2Q13367 1082 aa4.88□□□□□ -1.63
RNU2-53P-201ENST00000516257 IKZF1Q13422 519 aa4.88□□□□□ -1.63
RNU2-53P-201ENST00000516257 USPL1Q5W0Q7 1092 aa4.88□□□□□ -1.63
RNU2-53P-201ENST00000516257 HEXIM2Q96MH2 286 aaKnown RBP4.88□□□□□ -1.63
RNU2-53P-201ENST00000516257 CCDC87Q9NVE4 849 aa4.88□□□□□ -1.63
RNU2-53P-201ENST00000516257 NEFMP07197 916 aa4.87□□□□□ -1.63
RNU2-53P-201ENST00000516257 NPR3P17342 541 aa4.87□□□□□ -1.63
RNU2-53P-201ENST00000516257 ITPKAP23677 461 aa4.87□□□□□ -1.63
RNU2-53P-201ENST00000516257 GLI1P08151 1106 aa4.86□□□□□ -1.63
RNU2-53P-201ENST00000516257 INHBBP09529 407 aa4.86□□□□□ -1.63
RNU2-53P-201ENST00000516257 ZNF157P51786 506 aaPredicted RBP4.86□□□□□ -1.63
RNU2-53P-201ENST00000516257 KIF4BQ2VIQ3 1234 aa4.86□□□□□ -1.63
RNU2-53P-201ENST00000516257 KIAA0319Q5VV43 1072 aa4.86□□□□□ -1.63
RNU2-53P-201ENST00000516257 MPZL3Q6UWV2 235 aa4.86□□□□□ -1.63
RNU2-53P-201ENST00000516257 SPACA3Q8IXA5 215 aa4.86□□□□□ -1.63
RNU2-53P-201ENST00000516257 PCOLCE2Q9UKZ9 415 aa4.86□□□□□ -1.63
RNU2-53P-201ENST00000516257 SNX11Q9Y5W9 270 aa4.86□□□□□ -1.63
RNU2-53P-201ENST00000516257 NPIPB6E9PJ23 425 aa4.85□□□□□ -1.63
RNU2-53P-201ENST00000516257 SLFN14P0C7P3 912 aa4.85□□□□□ -1.63
RNU2-53P-201ENST00000516257 AFMP43652 599 aa4.85□□□□□ -1.63
RNU2-53P-201ENST00000516257 FAAP100Q0VG06 881 aa4.85□□□□□ -1.63
RNU2-53P-201ENST00000516257 FAM214BQ7L5A3 538 aa4.85□□□□□ -1.63
RNU2-53P-201ENST00000516257 ASB11Q8WXH4 323 aa4.85□□□□□ -1.63
RNU2-53P-201ENST00000516257 ISL2Q96A47 359 aa4.85□□□□□ -1.63
RNU2-53P-201ENST00000516257 EHD4Q9H223 541 aa4.85□□□□□ -1.63
RNU2-53P-201ENST00000516257 RAPGEFL1Q9UHV5 662 aa4.85□□□□□ -1.63
RNU2-53P-201ENST00000516257 NFIBO00712 420 aa4.84□□□□□ -1.63
RNU2-53P-201ENST00000516257 FAM13AO94988 1023 aa4.84□□□□□ -1.63
RNU2-53P-201ENST00000516257 PBXIP1Q96AQ6 731 aa4.84□□□□□ -1.63
RNU2-53P-201ENST00000516257 KIRREL1Q96J84 757 aa4.84□□□□□ -1.63
RNU2-53P-201ENST00000516257 KCNK12Q9HB15 430 aa4.84□□□□□ -1.63
RNU2-53P-201ENST00000516257 ABCB6Q9NP58 842 aa4.84□□□□□ -1.63
RNU2-53P-201ENST00000516257 NPHS2Q9NP85 383 aa4.84□□□□□ -1.63
RNU2-53P-201ENST00000516257 C19orf73Q9NVV2 129 aa4.84□□□□□ -1.63
RNU2-53P-201ENST00000516257 PITPNM2Q9BZ72 1349 aa4.83□□□□□ -1.64
RNU2-53P-201ENST00000516257 GSTP1P09211 210 aaKnown RBP4.83□□□□□ -1.64
RNU2-53P-201ENST00000516257 NKPD1Q17RQ9 610 aa4.83□□□□□ -1.64
RNU2-53P-201ENST00000516257 AMIGO3Q86WK7 504 aa4.83□□□□□ -1.64
RNU2-53P-201ENST00000516257 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.83□□□□□ -1.64
RNU2-53P-201ENST00000516257 FBXO15Q8NCQ5 510 aaPredicted RBP4.83□□□□□ -1.64
RNU2-53P-201ENST00000516257 DIRC2Q96SL1 478 aa4.83□□□□□ -1.64
RNU2-53P-201ENST00000516257 NSUN3Q9H649 340 aaKnown RBP4.83□□□□□ -1.64
RNU2-53P-201ENST00000516257 KRT82Q9NSB4 513 aa4.83□□□□□ -1.64
RNU2-53P-201ENST00000516257 JAG2Q9Y219 1238 aa4.83□□□□□ -1.64
RNU2-53P-201ENST00000516257 PTPN12Q05209 780 aaKnown RBP4.82□□□□□ -1.64
RNU2-53P-201ENST00000516257 TMEM67Q5HYA8 995 aa4.82□□□□□ -1.64
RNU2-53P-201ENST00000516257 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
RNU2-53P-201ENST00000516257 CYFIP1Q7L576 1253 aa4.82□□□□□ -1.64
RNU2-53P-201ENST00000516257 PDZD3Q86UT5 571 aa4.82□□□□□ -1.64
RNU2-53P-201ENST00000516257 CARS2Q9HA77 564 aaKnown RBP4.82□□□□□ -1.64
RNU2-53P-201ENST00000516257 SSU72Q9NP77 194 aaKnown RBP4.82□□□□□ -1.64
RNU2-53P-201ENST00000516257 CD320Q9NPF0 282 aa4.82□□□□□ -1.64
RNU2-53P-201ENST00000516257 ANO2Q9NQ90 1003 aa4.82□□□□□ -1.64
RNU2-53P-201ENST00000516257 SSFA2P28290 1259 aa4.81□□□□□ -1.64
RNU2-53P-201ENST00000516257 CTSWP56202 376 aa4.81□□□□□ -1.64
RNU2-53P-201ENST00000516257 ZNF211Q13398 564 aaPredicted RBP4.81□□□□□ -1.64
RNU2-53P-201ENST00000516257 ORC1Q13415 861 aa4.81□□□□□ -1.64
RNU2-53P-201ENST00000516257 KCNA10Q16322 511 aa4.81□□□□□ -1.64
RNU2-53P-201ENST00000516257 UBE3DQ7Z6J8 389 aa4.81□□□□□ -1.64
RNU2-53P-201ENST00000516257 C20orf173Q96LM9 149 aa4.81□□□□□ -1.64
RNU2-53P-201ENST00000516257 GTF2IRD1Q9UHL9 959 aa4.81□□□□□ -1.64
RNU2-53P-201ENST00000516257 IGF2BP3O00425 579 aaKnown RBP eCLIP4.8□□□□□ -1.64
RNU2-53P-201ENST00000516257 HOXA5P20719 270 aa4.8□□□□□ -1.64
RNU2-53P-201ENST00000516257 RPS26P11Q5JNZ5 115 aaPredicted RBP4.8□□□□□ -1.64
RNU2-53P-201ENST00000516257 PRPF40BQ6NWY9 871 aaKnown RBP4.8□□□□□ -1.64
RNU2-53P-201ENST00000516257 ATG14Q6ZNE5 492 aa4.8□□□□□ -1.64
RNU2-53P-201ENST00000516257 HOMEZQ8IX15 550 aa4.8□□□□□ -1.64
RNU2-53P-201ENST00000516257 RNF214Q8ND24 703 aa4.8□□□□□ -1.64
RNU2-53P-201ENST00000516257 KCNB2Q92953 911 aa4.8□□□□□ -1.64
RNU2-53P-201ENST00000516257 TMEM238LA0A1B0GVL6 79 aa4.79□□□□□ -1.64
RNU2-53P-201ENST00000516257 SUPT5HO00267 1087 aaKnown RBP4.79□□□□□ -1.64
RNU2-53P-201ENST00000516257 CLCN7P51798 805 aa4.79□□□□□ -1.64
RNU2-53P-201ENST00000516257 FKBP4Q02790 459 aaKnown RBP eCLIP4.79□□□□□ -1.64
RNU2-53P-201ENST00000516257 SF3B2Q13435 895 aaKnown RBP4.79□□□□□ -1.64
RNU2-53P-201ENST00000516257 ZC3H12AQ5D1E8 599 aaKnown RBP4.79□□□□□ -1.64
RNU2-53P-201ENST00000516257 STK35Q8TDR2 534 aa4.79□□□□□ -1.64
RNU2-53P-201ENST00000516257 ATP13A1Q9HD20 1204 aa4.79□□□□□ -1.64
RNU2-53P-201ENST00000516257 PRDM10Q9NQV6 1147 aa4.79□□□□□ -1.64
RNU2-53P-201ENST00000516257 ADAMTS20P59510 1910 aa4.79□□□□□ -1.64
RNU2-53P-201ENST00000516257 GNAT3A8MTJ3 354 aa4.78□□□□□ -1.64
RNU2-53P-201ENST00000516257 EOMESO95936 686 aa4.78□□□□□ -1.64
RNU2-53P-201ENST00000516257 ABL1P00519 1130 aa4.78□□□□□ -1.64
RNU2-53P-201ENST00000516257 TMEM253P0C7T8 217 aa4.78□□□□□ -1.64
RNU2-53P-201ENST00000516257 GDNFP39905 211 aa4.78□□□□□ -1.64
RNU2-53P-201ENST00000516257 ERVK-24P63145 666 aa4.78□□□□□ -1.64
RNU2-53P-201ENST00000516257 CIAPIN1Q6FI81 312 aa4.78□□□□□ -1.64
RNU2-53P-201ENST00000516257 SEMA3GQ9NS98 782 aa4.78□□□□□ -1.64
RNU2-53P-201ENST00000516257 GPN3Q9UHW5 284 aaPredicted RBP4.78□□□□□ -1.64
RNU2-53P-201ENST00000516257 TCAF2A6NFQ2 919 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms