RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 PRSS36Q5K4E3 855 aa8.16□□□□□ -1.1
SMARCA5-203ENST00000515531 SLC51AQ86UW1 340 aa8.16□□□□□ -1.1
SMARCA5-203ENST00000515531 ELMO3Q96BJ8 720 aa8.16□□□□□ -1.1
SMARCA5-203ENST00000515531 BACH2Q9BYV9 841 aa8.16□□□□□ -1.1
SMARCA5-203ENST00000515531 MIR1-1HGQ9H1L0 117 aa8.16□□□□□ -1.1
SMARCA5-203ENST00000515531 GSX1Q9H4S2 264 aaPredicted RBP8.16□□□□□ -1.1
SMARCA5-203ENST00000515531 TLR6Q9Y2C9 796 aa8.16□□□□□ -1.1
SMARCA5-203ENST00000515531 PCDHGC5Q9Y5F6 944 aa8.16□□□□□ -1.1
SMARCA5-203ENST00000515531 NFICP08651 508 aa8.15□□□□□ -1.1
SMARCA5-203ENST00000515531 FSTP19883 344 aa8.15□□□□□ -1.1
SMARCA5-203ENST00000515531 GBP2P32456 591 aaPredicted RBP8.15□□□□□ -1.1
SMARCA5-203ENST00000515531 ERVK-24P63145 666 aa8.15□□□□□ -1.1
SMARCA5-203ENST00000515531 EZH1Q92800 747 aaPredicted RBP8.15□□□□□ -1.1
SMARCA5-203ENST00000515531 MRRFQ96E11 262 aaKnown RBP8.15□□□□□ -1.1
SMARCA5-203ENST00000515531 RSRP1Q9BUV0 290 aa8.15□□□□□ -1.1
SMARCA5-203ENST00000515531 SSU72Q9NP77 194 aaKnown RBP8.15□□□□□ -1.1
SMARCA5-203ENST00000515531 DISC1Q9NRI5 854 aa8.15□□□□□ -1.1
SMARCA5-203ENST00000515531 DAGLAQ9Y4D2 1042 aa8.15□□□□□ -1.1
SMARCA5-203ENST00000515531 PCDHB5Q9Y5E4 795 aa8.15□□□□□ -1.1
SMARCA5-203ENST00000515531 CSADQ9Y600 493 aa8.15□□□□□ -1.1
SMARCA5-203ENST00000515531 DCDC2CA8MYV0 355 aa8.14□□□□□ -1.11
SMARCA5-203ENST00000515531 F6X3S4 739 aa8.14□□□□□ -1.11
SMARCA5-203ENST00000515531 NFIAQ12857 509 aa8.14□□□□□ -1.11
SMARCA5-203ENST00000515531 SEPT6Q14141 434 aa8.14□□□□□ -1.11
SMARCA5-203ENST00000515531 TTLL4Q14679 1199 aa8.14□□□□□ -1.11
SMARCA5-203ENST00000515531 HS2ST1Q7LGA3 356 aa8.14□□□□□ -1.11
SMARCA5-203ENST00000515531 HDXQ7Z353 690 aa8.14□□□□□ -1.11
SMARCA5-203ENST00000515531 C12orf40Q86WS4 652 aa8.14□□□□□ -1.11
SMARCA5-203ENST00000515531 JARID2Q92833 1246 aaPredicted RBP8.14□□□□□ -1.11
SMARCA5-203ENST00000515531 ACSS3Q9H6R3 686 aa8.14□□□□□ -1.11
SMARCA5-203ENST00000515531 GGT7Q9UJ14 662 aa8.14□□□□□ -1.11
SMARCA5-203ENST00000515531 MINDY4BA8MYZ0 360 aa8.13□□□□□ -1.11
SMARCA5-203ENST00000515531 IGLV1-40P01703 118 aa8.13□□□□□ -1.11
SMARCA5-203ENST00000515531 HCLS1P14317 486 aaPredicted RBP8.13□□□□□ -1.11
SMARCA5-203ENST00000515531 TFE3P19532 575 aaPredicted RBP8.13□□□□□ -1.11
SMARCA5-203ENST00000515531 RNF43Q68DV7 783 aa8.13□□□□□ -1.11
SMARCA5-203ENST00000515531 SMYD4Q8IYR2 804 aaPredicted RBP8.13□□□□□ -1.11
SMARCA5-203ENST00000515531 RNF214Q8ND24 703 aa8.13□□□□□ -1.11
SMARCA5-203ENST00000515531 PHC3Q8NDX5 983 aa8.13□□□□□ -1.11
SMARCA5-203ENST00000515531 TMEM74Q96NL1 305 aa8.13□□□□□ -1.11
SMARCA5-203ENST00000515531 SEMA6CQ9H3T2 930 aa8.13□□□□□ -1.11
SMARCA5-203ENST00000515531 LGR6Q9HBX8 967 aa8.13□□□□□ -1.11
SMARCA5-203ENST00000515531 VAMP1P23763 118 aa8.12□□□□□ -1.11
SMARCA5-203ENST00000515531 PTPN11Q06124 597 aaPredicted RBP8.12□□□□□ -1.11
SMARCA5-203ENST00000515531 PPM1JQ5JR12 505 aa8.12□□□□□ -1.11
SMARCA5-203ENST00000515531 Q8N3U1 123 aa8.12□□□□□ -1.11
SMARCA5-203ENST00000515531 GIMAP7Q8NHV1 300 aa8.12□□□□□ -1.11
SMARCA5-203ENST00000515531 SNCAIPQ9Y6H5 919 aa8.12□□□□□ -1.11
SMARCA5-203ENST00000515531 CAMK2GQ13555 558 aaPredicted RBP8.11□□□□□ -1.11
SMARCA5-203ENST00000515531 INPP5AQ14642 412 aa8.11□□□□□ -1.11
SMARCA5-203ENST00000515531 CDC37L1Q7L3B6 337 aa8.11□□□□□ -1.11
SMARCA5-203ENST00000515531 GAL3ST3Q96A11 431 aa8.11□□□□□ -1.11
SMARCA5-203ENST00000515531 DBNDD2Q9BQY9 259 aa8.11□□□□□ -1.11
SMARCA5-203ENST00000515531 KBTBD4Q9NVX7 518 aa8.11□□□□□ -1.11
SMARCA5-203ENST00000515531 PCOLCE2Q9UKZ9 415 aa8.11□□□□□ -1.11
SMARCA5-203ENST00000515531 PRAMEF27A3QJZ7 478 aa8.1□□□□□ -1.11
SMARCA5-203ENST00000515531 FANCGO15287 622 aa8.1□□□□□ -1.11
SMARCA5-203ENST00000515531 PF4P02776 101 aa8.1□□□□□ -1.11
SMARCA5-203ENST00000515531 ZNF76P36508 570 aa8.1□□□□□ -1.11
SMARCA5-203ENST00000515531 LMNB2Q03252 620 aa8.1□□□□□ -1.11
SMARCA5-203ENST00000515531 LRFN4Q6PJG9 635 aa8.1□□□□□ -1.11
SMARCA5-203ENST00000515531 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.1□□□□□ -1.11
SMARCA5-203ENST00000515531 ERMP1Q7Z2K6 904 aa8.1□□□□□ -1.11
SMARCA5-203ENST00000515531 FBXL6Q8N531 539 aa8.1□□□□□ -1.11
SMARCA5-203ENST00000515531 PLPPR2Q96GM1 343 aa8.1□□□□□ -1.11
SMARCA5-203ENST00000515531 MFSD14AQ96MC6 490 aa8.1□□□□□ -1.11
SMARCA5-203ENST00000515531 TBC1D32Q96NH3 1257 aa8.1□□□□□ -1.11
SMARCA5-203ENST00000515531 BPNT1O95861 308 aa8.09□□□□□ -1.11
SMARCA5-203ENST00000515531 FAM160A1Q05DH4 1040 aa8.09□□□□□ -1.11
SMARCA5-203ENST00000515531 WIPI1Q5MNZ9 446 aaPredicted RBP8.09□□□□□ -1.11
SMARCA5-203ENST00000515531 SNAP47Q5SQN1 464 aa8.09□□□□□ -1.11
SMARCA5-203ENST00000515531 LDLRAD1Q5T700 205 aa8.09□□□□□ -1.11
SMARCA5-203ENST00000515531 CCDC84Q86UT8 332 aaPredicted RBP8.09□□□□□ -1.11
SMARCA5-203ENST00000515531 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMARCA5-203ENST00000515531 COPRSQ9NQ92 184 aa8.09□□□□□ -1.11
SMARCA5-203ENST00000515531 METTL5Q9NRN9 209 aaKnown RBP8.09□□□□□ -1.11
SMARCA5-203ENST00000515531 UNCXA6NJT0 531 aa8.08□□□□□ -1.12
SMARCA5-203ENST00000515531 SCAMP3O14828 347 aaKnown RBP8.08□□□□□ -1.12
SMARCA5-203ENST00000515531 RING1Q06587 406 aa8.08□□□□□ -1.12
SMARCA5-203ENST00000515531 ZBTB37Q5TC79 503 aa8.08□□□□□ -1.12
SMARCA5-203ENST00000515531 CYFIP1Q7L576 1253 aa8.08□□□□□ -1.12
SMARCA5-203ENST00000515531 GOLM1Q8NBJ4 401 aa8.08□□□□□ -1.12
SMARCA5-203ENST00000515531 KCT2Q8NC54 265 aa8.08□□□□□ -1.12
SMARCA5-203ENST00000515531 ZNF507Q8TCN5 953 aa8.08□□□□□ -1.12
SMARCA5-203ENST00000515531 RNF34Q969K3 372 aa8.08□□□□□ -1.12
SMARCA5-203ENST00000515531 ISL2Q96A47 359 aa8.08□□□□□ -1.12
SMARCA5-203ENST00000515531 RHOVQ96L33 236 aa8.08□□□□□ -1.12
SMARCA5-203ENST00000515531 ATG3Q9NT62 314 aa8.08□□□□□ -1.12
SMARCA5-203ENST00000515531 PRKAG2Q9UGJ0 569 aa8.08□□□□□ -1.12
SMARCA5-203ENST00000515531 WDR64B1ANS9 1081 aa8.07□□□□□ -1.12
SMARCA5-203ENST00000515531 RECKO95980 971 aa8.07□□□□□ -1.12
SMARCA5-203ENST00000515531 NEFMP07197 916 aa8.07□□□□□ -1.12
SMARCA5-203ENST00000515531 ITGB7P26010 798 aa8.07□□□□□ -1.12
SMARCA5-203ENST00000515531 CDK8P49336 464 aa8.07□□□□□ -1.12
SMARCA5-203ENST00000515531 ETF1P62495 437 aaKnown RBP8.07□□□□□ -1.12
SMARCA5-203ENST00000515531 FANCCQ00597 558 aa8.07□□□□□ -1.12
SMARCA5-203ENST00000515531 RPL6Q02878 288 aaKnown RBP8.07□□□□□ -1.12
SMARCA5-203ENST00000515531 BNC2Q6ZN30 1099 aaPredicted RBP8.07□□□□□ -1.12
SMARCA5-203ENST00000515531 SHKBP1Q8TBC3 707 aa8.07□□□□□ -1.12
SMARCA5-203ENST00000515531 GATAD2BQ8WXI9 593 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms