RNA–Protein interactions for RNA: ENST00000515056.5

APBB3-221, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-221ENST00000515056 CHD4Q14839 1912 aa17.13■□□□□ 0.33
APBB3-221ENST00000515056 SEMA3EO15041 775 aa17.12■□□□□ 0.33
APBB3-221ENST00000515056 SPATA5Q8NB90 893 aa17.12■□□□□ 0.33
APBB3-221ENST00000515056 LLPHQ9BRT6 129 aaKnown RBP17.12■□□□□ 0.33
APBB3-221ENST00000515056 YDJCA8MPS7 323 aa17.12■□□□□ 0.33
APBB3-221ENST00000515056 ZBTB22O15209 634 aa17.12■□□□□ 0.33
APBB3-221ENST00000515056 CDC37L1Q7L3B6 337 aa17.12■□□□□ 0.33
APBB3-221ENST00000515056 NIM1KQ8IY84 436 aa17.12■□□□□ 0.33
APBB3-221ENST00000515056 ZNRF3Q9ULT6 936 aa17.12■□□□□ 0.33
APBB3-221ENST00000515056 ZAP70P43403 619 aa17.11■□□□□ 0.33
APBB3-221ENST00000515056 GTF2IP78347 998 aa17.11■□□□□ 0.33
APBB3-221ENST00000515056 LRRFIP1Q32MZ4 808 aaKnown RBP17.11■□□□□ 0.33
APBB3-221ENST00000515056 TTLL5Q6EMB2 1281 aa17.11■□□□□ 0.33
APBB3-221ENST00000515056 PIBF1Q8WXW3 757 aa17.11■□□□□ 0.33
APBB3-221ENST00000515056 CHMP4CQ96CF2 233 aa17.11■□□□□ 0.33
APBB3-221ENST00000515056 TCEANC2Q96MN5 208 aa17.11■□□□□ 0.33
APBB3-221ENST00000515056 SEC62Q99442 399 aaKnown RBP17.11■□□□□ 0.33
APBB3-221ENST00000515056 JAG2Q9Y219 1238 aa17.11■□□□□ 0.33
APBB3-221ENST00000515056 SBF1O95248 1867 aa17.11■□□□□ 0.33
APBB3-221ENST00000515056 COL4A5P29400 1685 aa17.11■□□□□ 0.33
APBB3-221ENST00000515056 DCAF8L1A6NGE4 600 aa17.11■□□□□ 0.33
APBB3-221ENST00000515056 CCDC129Q6ZRS4 1044 aa17.11■□□□□ 0.33
APBB3-221ENST00000515056 Q6ZUG5 572 aa17.11■□□□□ 0.33
APBB3-221ENST00000515056 DHX32Q7L7V1 743 aaKnown RBP17.11■□□□□ 0.33
APBB3-221ENST00000515056 TTC6Q86TZ1 520 aa17.11■□□□□ 0.33
APBB3-221ENST00000515056 AGXT2Q9BYV1 514 aa17.11■□□□□ 0.33
APBB3-221ENST00000515056 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.11■□□□□ 0.33
APBB3-221ENST00000515056 AKAP11Q9UKA4 1901 aa17.1■□□□□ 0.33
APBB3-221ENST00000515056 GOLIM4O00461 696 aa17.1■□□□□ 0.33
APBB3-221ENST00000515056 CHAF1AQ13111 956 aaPredicted RBP17.1■□□□□ 0.33
APBB3-221ENST00000515056 KIF3AQ9Y496 699 aa17.1■□□□□ 0.33
APBB3-221ENST00000515056 RNF113AO15541 343 aaKnown RBP17.09■□□□□ 0.33
APBB3-221ENST00000515056 PFKFB2O60825 505 aa17.09■□□□□ 0.33
APBB3-221ENST00000515056 SMARCC2Q8TAQ2 1214 aa17.09■□□□□ 0.33
APBB3-221ENST00000515056 ZSCAN16Q9H4T2 348 aaPredicted RBP17.09■□□□□ 0.33
APBB3-221ENST00000515056 RNF181Q9P0P0 153 aa17.09■□□□□ 0.33
APBB3-221ENST00000515056 FZD9O00144 591 aa17.09■□□□□ 0.33
APBB3-221ENST00000515056 RAD17O75943 681 aa17.09■□□□□ 0.33
APBB3-221ENST00000515056 C9orf131Q5VYM1 1079 aa17.09■□□□□ 0.33
APBB3-221ENST00000515056 FBXL16Q8N461 479 aa17.09■□□□□ 0.33
APBB3-221ENST00000515056 FAM205AQ6ZU69 1335 aa17.09■□□□□ 0.33
APBB3-221ENST00000515056 USP17L3A6NCW0 530 aa17.08■□□□□ 0.33
APBB3-221ENST00000515056 USP17L4A6NCW7 530 aa17.08■□□□□ 0.33
APBB3-221ENST00000515056 EXOSC10Q01780 885 aaKnown RBP17.08■□□□□ 0.33
APBB3-221ENST00000515056 CXCL9Q07325 125 aa17.08■□□□□ 0.33
APBB3-221ENST00000515056 STRIP1Q5VSL9 837 aa17.08■□□□□ 0.33
APBB3-221ENST00000515056 USP17L1Q7RTZ2 530 aa17.08■□□□□ 0.33
APBB3-221ENST00000515056 WDR66Q8TBY9 1149 aa17.08■□□□□ 0.33
APBB3-221ENST00000515056 SCN9AQ15858 1988 aa17.08■□□□□ 0.32
APBB3-221ENST00000515056 PDS5AQ29RF7 1337 aaKnown RBP17.08■□□□□ 0.32
APBB3-221ENST00000515056 FBXW7Q969H0 707 aa17.08■□□□□ 0.32
APBB3-221ENST00000515056 SPTLC3Q9NUV7 552 aa17.08■□□□□ 0.32
APBB3-221ENST00000515056 COL1A1P02452 1464 aaPredicted RBP17.07■□□□□ 0.32
APBB3-221ENST00000515056 KDM4AO75164 1064 aa17.07■□□□□ 0.32
APBB3-221ENST00000515056 ZFYP08048 801 aaPredicted RBP17.07■□□□□ 0.32
APBB3-221ENST00000515056 CCDC192P0DO97 292 aa17.07■□□□□ 0.32
APBB3-221ENST00000515056 HSPD1P10809 573 aaKnown RBP17.07■□□□□ 0.32
APBB3-221ENST00000515056 STK3Q13188 491 aa17.07■□□□□ 0.32
APBB3-221ENST00000515056 NOLC1Q14978 699 aaKnown RBP eCLIP17.07■□□□□ 0.32
APBB3-221ENST00000515056 DNTTIP2Q5QJE6 756 aaKnown RBP17.07■□□□□ 0.32
APBB3-221ENST00000515056 STOX1Q6ZVD7 989 aa17.07■□□□□ 0.32
APBB3-221ENST00000515056 ABCF2Q9UG63 623 aa17.07■□□□□ 0.32
APBB3-221ENST00000515056 CHGBP05060 677 aa17.06■□□□□ 0.32
APBB3-221ENST00000515056 PTMAP06454 111 aaKnown RBP17.06■□□□□ 0.32
APBB3-221ENST00000515056 GIMAP6Q6P9H5 292 aa17.06■□□□□ 0.32
APBB3-221ENST00000515056 FERMT3Q86UX7 667 aa17.06■□□□□ 0.32
APBB3-221ENST00000515056 SPATA32Q96LK8 384 aa17.06■□□□□ 0.32
APBB3-221ENST00000515056 FEZ1Q99689 392 aa17.06■□□□□ 0.32
APBB3-221ENST00000515056 MXD3Q9BW11 206 aa17.06■□□□□ 0.32
APBB3-221ENST00000515056 LAMA4Q16363 1823 aa17.06■□□□□ 0.32
APBB3-221ENST00000515056 PSMD14O00487 310 aa17.06■□□□□ 0.32
APBB3-221ENST00000515056 VIL1P09327 827 aaKnown RBP17.06■□□□□ 0.32
APBB3-221ENST00000515056 EIF6P56537 245 aaKnown RBP17.06■□□□□ 0.32
APBB3-221ENST00000515056 RESTQ13127 1097 aa17.06■□□□□ 0.32
APBB3-221ENST00000515056 MFSD14BQ5SR56 506 aa17.06■□□□□ 0.32
APBB3-221ENST00000515056 DACT2Q5SW24 774 aa17.06■□□□□ 0.32
APBB3-221ENST00000515056 NAA16Q6N069 864 aaPredicted RBP17.06■□□□□ 0.32
APBB3-221ENST00000515056 PDCL2Q8N4E4 241 aa17.06■□□□□ 0.32
APBB3-221ENST00000515056 TBC1D22AQ8WUA7 517 aa17.06■□□□□ 0.32
APBB3-221ENST00000515056 LEO1Q8WVC0 666 aaPredicted RBP17.06■□□□□ 0.32
APBB3-221ENST00000515056 BRF1Q92994 677 aa17.06■□□□□ 0.32
APBB3-221ENST00000515056 DDX19AQ9NUU7 478 aaKnown RBP17.06■□□□□ 0.32
APBB3-221ENST00000515056 DICER1Q9UPY3 1922 aaKnown RBP17.06■□□□□ 0.32
APBB3-221ENST00000515056 MAST3O60307 1309 aa17.05■□□□□ 0.32
APBB3-221ENST00000515056 SCRN1Q12765 414 aa17.05■□□□□ 0.32
APBB3-221ENST00000515056 TTF1Q15361 905 aaPredicted RBP17.05■□□□□ 0.32
APBB3-221ENST00000515056 CIAPIN1Q6FI81 312 aa17.05■□□□□ 0.32
APBB3-221ENST00000515056 ANKRD7Q92527 254 aa17.05■□□□□ 0.32
APBB3-221ENST00000515056 ZNF274Q96GC6 653 aaPredicted RBP17.05■□□□□ 0.32
APBB3-221ENST00000515056 NUP62CLQ9H1M0 184 aa17.05■□□□□ 0.32
APBB3-221ENST00000515056 PIH1D3Q9NQM4 214 aaKnown RBP17.05■□□□□ 0.32
APBB3-221ENST00000515056 CFAP45Q9UL16 551 aa17.05■□□□□ 0.32
APBB3-221ENST00000515056 SALL1Q9NSC2 1324 aa17.05■□□□□ 0.32
APBB3-221ENST00000515056 GOLGA6L4A6NEF3 574 aa17.05■□□□□ 0.32
APBB3-221ENST00000515056 JAK2O60674 1132 aa17.05■□□□□ 0.32
APBB3-221ENST00000515056 MAP3K11Q16584 847 aa17.05■□□□□ 0.32
APBB3-221ENST00000515056 ATL3Q6DD88 541 aa17.05■□□□□ 0.32
APBB3-221ENST00000515056 RBM43Q6ZSC3 357 aaKnown RBP17.05■□□□□ 0.32
APBB3-221ENST00000515056 CERS5Q8N5B7 392 aa17.05■□□□□ 0.32
APBB3-221ENST00000515056 LRP2BPQ9P2M1 347 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 232.8 ms