RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 STAG1Q8WVM7 1258 aa23.35■■□□□ 1.33
SSBP2-218ENST00000514493 DCAF8L1A6NGE4 600 aa23.34■■□□□ 1.33
SSBP2-218ENST00000514493 AK2P54819 239 aa23.34■■□□□ 1.33
SSBP2-218ENST00000514493 SBK1Q52WX2 424 aa23.34■■□□□ 1.33
SSBP2-218ENST00000514493 NCOA7Q8NI08 942 aa23.34■■□□□ 1.33
SSBP2-218ENST00000514493 TMX3Q96JJ7 454 aa23.34■■□□□ 1.33
SSBP2-218ENST00000514493 FLT1P17948 1338 aa23.34■■□□□ 1.33
SSBP2-218ENST00000514493 CTDSPL2Q05D32 466 aa23.33■■□□□ 1.33
SSBP2-218ENST00000514493 TNIP1Q15025 636 aa23.33■■□□□ 1.33
SSBP2-218ENST00000514493 AKNAD1Q5T1N1 836 aa23.33■■□□□ 1.33
SSBP2-218ENST00000514493 DHX32Q7L7V1 743 aaKnown RBP23.33■■□□□ 1.33
SSBP2-218ENST00000514493 RALYLQ86SE5 291 aaKnown RBP23.33■■□□□ 1.33
SSBP2-218ENST00000514493 MB21D2Q8IYB1 491 aaPredicted RBP23.33■■□□□ 1.33
SSBP2-218ENST00000514493 ALDH8A1Q9H2A2 487 aaPredicted RBP23.33■■□□□ 1.33
SSBP2-218ENST00000514493 NEDD4P46934 1319 aa23.33■■□□□ 1.32
SSBP2-218ENST00000514493 MINDY4BA8MYZ0 360 aa23.32■■□□□ 1.32
SSBP2-218ENST00000514493 USP17L12C9JPN9 530 aa23.32■■□□□ 1.32
SSBP2-218ENST00000514493 USP17L21D6R901 530 aa23.32■■□□□ 1.32
SSBP2-218ENST00000514493 FZD9O00144 591 aa23.32■■□□□ 1.32
SSBP2-218ENST00000514493 DDIT3P35638 169 aa23.32■■□□□ 1.32
SSBP2-218ENST00000514493 TRDNQ13061 729 aa23.32■■□□□ 1.32
SSBP2-218ENST00000514493 MCM9Q9NXL9 1143 aa23.32■■□□□ 1.32
SSBP2-218ENST00000514493 ZBTB12Q9Y330 459 aaPredicted RBP23.32■■□□□ 1.32
SSBP2-218ENST00000514493 MYH8P13535 1937 aa23.32■■□□□ 1.32
SSBP2-218ENST00000514493 ROBO3Q96MS0 1386 aa23.32■■□□□ 1.32
SSBP2-218ENST00000514493 LMNB1P20700 586 aa23.32■■□□□ 1.32
SSBP2-218ENST00000514493 CDC42EP5Q6NZY7 148 aa23.32■■□□□ 1.32
SSBP2-218ENST00000514493 MAPKAPK5Q8IW41 473 aa23.32■■□□□ 1.32
SSBP2-218ENST00000514493 TCEANC2Q96MN5 208 aa23.32■■□□□ 1.32
SSBP2-218ENST00000514493 RNF41Q9H4P4 317 aaPredicted RBP23.32■■□□□ 1.32
SSBP2-218ENST00000514493 HDAC9Q9UKV0 1011 aa23.32■■□□□ 1.32
SSBP2-218ENST00000514493 CYP2D7A0A087X1C5 515 aa23.31■■□□□ 1.32
SSBP2-218ENST00000514493 NOL8Q76FK4 1167 aaKnown RBP23.31■■□□□ 1.32
SSBP2-218ENST00000514493 CNNM2Q9H8M5 875 aa23.31■■□□□ 1.32
SSBP2-218ENST00000514493 USP40Q9NVE5 1235 aa23.31■■□□□ 1.32
SSBP2-218ENST00000514493 WDHD1O75717 1129 aaPredicted RBP23.3■■□□□ 1.32
SSBP2-218ENST00000514493 RBM5P52756 815 aaKnown RBP eCLIP23.3■■□□□ 1.32
SSBP2-218ENST00000514493 EIF6P56537 245 aaKnown RBP23.3■■□□□ 1.32
SSBP2-218ENST00000514493 EXOSC10Q01780 885 aaKnown RBP23.3■■□□□ 1.32
SSBP2-218ENST00000514493 ANKRD1Q15327 319 aa23.3■■□□□ 1.32
SSBP2-218ENST00000514493 CFAP100Q494V2 611 aa23.3■■□□□ 1.32
SSBP2-218ENST00000514493 CHMP5Q9NZZ3 219 aa23.3■■□□□ 1.32
SSBP2-218ENST00000514493 PCDHAC2Q9Y5I4 1007 aa23.3■■□□□ 1.32
SSBP2-218ENST00000514493 TACC3Q9Y6A5 838 aa23.3■■□□□ 1.32
SSBP2-218ENST00000514493 WDR19Q8NEZ3 1342 aa23.3■■□□□ 1.32
SSBP2-218ENST00000514493 USP17L8P0C7I0 530 aa23.29■■□□□ 1.32
SSBP2-218ENST00000514493 CUL4AQ13619 759 aa23.29■■□□□ 1.32
SSBP2-218ENST00000514493 MFSD6Q6ZSS7 791 aa23.29■■□□□ 1.32
SSBP2-218ENST00000514493 AMOTL1Q8IY63 956 aa23.29■■□□□ 1.32
SSBP2-218ENST00000514493 OGFOD1Q8N543 542 aa23.29■■□□□ 1.32
SSBP2-218ENST00000514493 FOXD4L1Q9NU39 408 aa23.29■■□□□ 1.32
SSBP2-218ENST00000514493 CIZ1Q9ULV3 898 aaPredicted RBP23.29■■□□□ 1.32
SSBP2-218ENST00000514493 LIMCH1Q9UPQ0 1083 aa23.29■■□□□ 1.32
SSBP2-218ENST00000514493 CYP2D6P10635 497 aa23.29■■□□□ 1.32
SSBP2-218ENST00000514493 PCP11498 1178 aaKnown RBP23.29■■□□□ 1.32
SSBP2-218ENST00000514493 RPS12P25398 132 aaKnown RBP23.29■■□□□ 1.32
SSBP2-218ENST00000514493 MCM5P33992 734 aa23.29■■□□□ 1.32
SSBP2-218ENST00000514493 TOB2Q14106 344 aaPredicted RBP23.29■■□□□ 1.32
SSBP2-218ENST00000514493 KRT23Q9C075 422 aa23.29■■□□□ 1.32
SSBP2-218ENST00000514493 SMIM22K7EJ46 135 aa23.28■■□□□ 1.32
SSBP2-218ENST00000514493 C12orf60Q5U649 245 aa23.28■■□□□ 1.32
SSBP2-218ENST00000514493 SIPA1L1O43166 1804 aa23.28■■□□□ 1.32
SSBP2-218ENST00000514493 B4E1Z4 1266 aa23.27■■□□□ 1.32
SSBP2-218ENST00000514493 FGRP09769 529 aa23.27■■□□□ 1.32
SSBP2-218ENST00000514493 ANTXR2P58335 489 aa23.27■■□□□ 1.32
SSBP2-218ENST00000514493 AGXT2Q9BYV1 514 aa23.27■■□□□ 1.32
SSBP2-218ENST00000514493 DDX4Q9NQI0 724 aaKnown RBP23.27■■□□□ 1.32
SSBP2-218ENST00000514493 ZNF541Q9H0D2 1346 aa23.27■■□□□ 1.32
SSBP2-218ENST00000514493 SPDYE2BA6NHP3 402 aa23.27■■□□□ 1.32
SSBP2-218ENST00000514493 PRC1O43663 620 aa23.27■■□□□ 1.32
SSBP2-218ENST00000514493 SLC3A2P08195 630 aaKnown RBP23.27■■□□□ 1.32
SSBP2-218ENST00000514493 SPDYE6P0CI01 402 aa23.27■■□□□ 1.32
SSBP2-218ENST00000514493 MMP14P50281 582 aa23.27■■□□□ 1.32
SSBP2-218ENST00000514493 EVX2Q03828 476 aa23.27■■□□□ 1.32
SSBP2-218ENST00000514493 Q6ZUG5 572 aa23.27■■□□□ 1.32
SSBP2-218ENST00000514493 FBXL16Q8N461 479 aa23.27■■□□□ 1.32
SSBP2-218ENST00000514493 INTS4Q96HW7 963 aaKnown RBP23.27■■□□□ 1.32
SSBP2-218ENST00000514493 INCENPQ9NQS7 918 aa23.27■■□□□ 1.32
SSBP2-218ENST00000514493 SAP30BPQ9UHR5 308 aaKnown RBP23.27■■□□□ 1.32
SSBP2-218ENST00000514493 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.27■■□□□ 1.32
SSBP2-218ENST00000514493 PICALMQ13492 652 aa23.26■■□□□ 1.31
SSBP2-218ENST00000514493 MTMR14Q8NCE2 650 aa23.26■■□□□ 1.31
SSBP2-218ENST00000514493 NKX2-3Q8TAU0 364 aa23.26■■□□□ 1.31
SSBP2-218ENST00000514493 LRRC2Q9BYS8 371 aa23.26■■□□□ 1.31
SSBP2-218ENST00000514493 POLR3DP05423 398 aaPredicted RBP23.25■■□□□ 1.31
SSBP2-218ENST00000514493 CHST3Q7LGC8 479 aa23.25■■□□□ 1.31
SSBP2-218ENST00000514493 ZSCAN31Q96LW9 406 aaPredicted RBP23.25■■□□□ 1.31
SSBP2-218ENST00000514493 IDI2Q9BXS1 227 aa23.25■■□□□ 1.31
SSBP2-218ENST00000514493 OSBPL5Q9H0X9 879 aaPredicted RBP23.25■■□□□ 1.31
SSBP2-218ENST00000514493 CWC22Q9HCG8 908 aaKnown RBP23.25■■□□□ 1.31
SSBP2-218ENST00000514493 ORC4O43929 436 aa23.24■■□□□ 1.31
SSBP2-218ENST00000514493 NPM3O75607 178 aaKnown RBP23.24■■□□□ 1.31
SSBP2-218ENST00000514493 DLGAP5Q15398 846 aa23.24■■□□□ 1.31
SSBP2-218ENST00000514493 C9orf131Q5VYM1 1079 aa23.24■■□□□ 1.31
SSBP2-218ENST00000514493 CYB5R4Q7L1T6 521 aa23.24■■□□□ 1.31
SSBP2-218ENST00000514493 STK11IPQ8N1F8 1099 aa23.24■■□□□ 1.31
SSBP2-218ENST00000514493 PRMT6Q96LA8 375 aaPredicted RBP23.24■■□□□ 1.31
SSBP2-218ENST00000514493 KDM4AO75164 1064 aa23.24■■□□□ 1.31
SSBP2-218ENST00000514493 FGD1P98174 961 aa23.24■■□□□ 1.31
SSBP2-218ENST00000514493 NFIAQ12857 509 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms