RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 FBXO46Q6PJ61 603 aaPredicted RBP12.85□□□□□ -0.35
HMGXB3-205ENST00000514469 SH3BP5LQ7L8J4 393 aa12.85□□□□□ -0.35
HMGXB3-205ENST00000514469 FAM43AQ8N2R8 423 aa12.85□□□□□ -0.35
HMGXB3-205ENST00000514469 ZNF512BQ96KM6 892 aaPredicted RBP12.85□□□□□ -0.35
HMGXB3-205ENST00000514469 ZCCHC17Q9NP64 241 aaKnown RBP12.85□□□□□ -0.35
HMGXB3-205ENST00000514469 TLR7Q9NYK1 1049 aaKnown RBP12.85□□□□□ -0.35
HMGXB3-205ENST00000514469 DBNLQ9UJU6 430 aaKnown RBP12.85□□□□□ -0.35
HMGXB3-205ENST00000514469 DDTLA6NHG4 134 aaPredicted RBP12.84□□□□□ -0.35
HMGXB3-205ENST00000514469 PHF20L1A8MW92 1017 aa12.84□□□□□ -0.35
HMGXB3-205ENST00000514469 TNRC18O15417 2968 aaPredicted RBP12.84□□□□□ -0.35
HMGXB3-205ENST00000514469 NPM3O75607 178 aaKnown RBP12.84□□□□□ -0.35
HMGXB3-205ENST00000514469 LDHCP07864 332 aa12.84□□□□□ -0.35
HMGXB3-205ENST00000514469 MAP3K10Q02779 954 aa12.84□□□□□ -0.35
HMGXB3-205ENST00000514469 PICALMQ13492 652 aa12.84□□□□□ -0.35
HMGXB3-205ENST00000514469 CCDC158Q5M9N0 1113 aa12.84□□□□□ -0.35
HMGXB3-205ENST00000514469 RAI14Q9P0K7 980 aa12.84□□□□□ -0.35
HMGXB3-205ENST00000514469 KCNH4Q9UQ05 1017 aa12.84□□□□□ -0.35
HMGXB3-205ENST00000514469 BTBD19C9JJ37 291 aa12.83□□□□□ -0.36
HMGXB3-205ENST00000514469 IGSF3O75054 1194 aa12.83□□□□□ -0.36
HMGXB3-205ENST00000514469 CYP2E1P05181 493 aaPredicted RBP12.83□□□□□ -0.36
HMGXB3-205ENST00000514469 TAF1CQ15572 869 aaPredicted RBP12.83□□□□□ -0.36
HMGXB3-205ENST00000514469 OTOP1Q7RTM1 612 aa12.83□□□□□ -0.36
HMGXB3-205ENST00000514469 CD99L2Q8TCZ2 262 aa12.83□□□□□ -0.36
HMGXB3-205ENST00000514469 EAF2Q96CJ1 260 aaPredicted RBP12.83□□□□□ -0.36
HMGXB3-205ENST00000514469 ERO1AQ96HE7 468 aa12.83□□□□□ -0.36
HMGXB3-205ENST00000514469 SNRKQ9NRH2 765 aa12.83□□□□□ -0.36
HMGXB3-205ENST00000514469 LRP2BPQ9P2M1 347 aa12.83□□□□□ -0.36
HMGXB3-205ENST00000514469 RCAN3Q9UKA8 241 aa12.83□□□□□ -0.36
HMGXB3-205ENST00000514469 DOCK1Q14185 1865 aa12.82□□□□□ -0.36
HMGXB3-205ENST00000514469 SP3Q02447 781 aa12.82□□□□□ -0.36
HMGXB3-205ENST00000514469 MLLT1Q03111 559 aaPredicted RBP12.82□□□□□ -0.36
HMGXB3-205ENST00000514469 ERC1Q8IUD2 1116 aa12.82□□□□□ -0.36
HMGXB3-205ENST00000514469 ZSCAN29Q8IWY8 852 aaPredicted RBP12.82□□□□□ -0.36
HMGXB3-205ENST00000514469 SCYL3Q8IZE3 742 aa12.82□□□□□ -0.36
HMGXB3-205ENST00000514469 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.82□□□□□ -0.36
HMGXB3-205ENST00000514469 CCDC8Q9H0W5 538 aaPredicted RBP12.82□□□□□ -0.36
HMGXB3-205ENST00000514469 ZFYVE28Q9HCC9 887 aa12.82□□□□□ -0.36
HMGXB3-205ENST00000514469 DDX19BQ9UMR2 479 aa12.82□□□□□ -0.36
HMGXB3-205ENST00000514469 EXOC6BQ9Y2D4 811 aa12.82□□□□□ -0.36
HMGXB3-205ENST00000514469 TRIM17Q9Y577 477 aa12.82□□□□□ -0.36
HMGXB3-205ENST00000514469 SLURP2P0DP57 97 aa12.81□□□□□ -0.36
HMGXB3-205ENST00000514469 ZAP70P43403 619 aa12.81□□□□□ -0.36
HMGXB3-205ENST00000514469 SOX10P56693 466 aa12.81□□□□□ -0.36
HMGXB3-205ENST00000514469 CAP1Q01518 475 aa12.81□□□□□ -0.36
HMGXB3-205ENST00000514469 MOGSQ13724 837 aa12.81□□□□□ -0.36
HMGXB3-205ENST00000514469 NAA16Q6N069 864 aaPredicted RBP12.81□□□□□ -0.36
HMGXB3-205ENST00000514469 ANKRD23Q86SG2 305 aa12.81□□□□□ -0.36
HMGXB3-205ENST00000514469 ADGRA1Q86SQ6 560 aa12.81□□□□□ -0.36
HMGXB3-205ENST00000514469 OSBPL5Q9H0X9 879 aaPredicted RBP12.81□□□□□ -0.36
HMGXB3-205ENST00000514469 ZBTB40Q9NUA8 1239 aa12.81□□□□□ -0.36
HMGXB3-205ENST00000514469 COG6Q9Y2V7 657 aa12.81□□□□□ -0.36
HMGXB3-205ENST00000514469 TBC1D12O60347 775 aa12.8□□□□□ -0.36
HMGXB3-205ENST00000514469 TLR2O60603 784 aa12.8□□□□□ -0.36
HMGXB3-205ENST00000514469 PTPRAP18433 802 aa12.8□□□□□ -0.36
HMGXB3-205ENST00000514469 HSP90AB4PQ58FF6 505 aa12.8□□□□□ -0.36
HMGXB3-205ENST00000514469 RPAP2Q8IXW5 612 aaPredicted RBP12.8□□□□□ -0.36
HMGXB3-205ENST00000514469 TEX11Q8IYF3 940 aa12.8□□□□□ -0.36
HMGXB3-205ENST00000514469 SH3RF3Q8TEJ3 882 aaPredicted RBP12.8□□□□□ -0.36
HMGXB3-205ENST00000514469 PIH1D3Q9NQM4 214 aaKnown RBP12.8□□□□□ -0.36
HMGXB3-205ENST00000514469 SIPA1L1O43166 1804 aa12.8□□□□□ -0.36
HMGXB3-205ENST00000514469 FOCADQ5VW36 1801 aa12.8□□□□□ -0.36
HMGXB3-205ENST00000514469 ADGRA2Q96PE1 1338 aa12.8□□□□□ -0.36
HMGXB3-205ENST00000514469 PHIPQ8WWQ0 1821 aa12.79□□□□□ -0.36
HMGXB3-205ENST00000514469 A0A0G2JLL6 359 aaPredicted RBP12.79□□□□□ -0.36
HMGXB3-205ENST00000514469 CXCL11O14625 94 aa12.79□□□□□ -0.36
HMGXB3-205ENST00000514469 CTNND1O60716 968 aaKnown RBP12.79□□□□□ -0.36
HMGXB3-205ENST00000514469 BAG3O95817 575 aa12.79□□□□□ -0.36
HMGXB3-205ENST00000514469 PLCG2P16885 1265 aa12.79□□□□□ -0.36
HMGXB3-205ENST00000514469 PPP4CP60510 307 aa12.79□□□□□ -0.36
HMGXB3-205ENST00000514469 PRRT2Q7Z6L0 340 aaPredicted RBP12.79□□□□□ -0.36
HMGXB3-205ENST00000514469 AACSQ86V21 672 aa12.79□□□□□ -0.36
HMGXB3-205ENST00000514469 SIRT2Q8IXJ6 389 aa12.79□□□□□ -0.36
HMGXB3-205ENST00000514469 RHPN1Q8TCX5 695 aa12.79□□□□□ -0.36
HMGXB3-205ENST00000514469 NOL10Q9BSC4 688 aaKnown RBP12.79□□□□□ -0.36
HMGXB3-205ENST00000514469 EFCC1Q9HA90 598 aa12.79□□□□□ -0.36
HMGXB3-205ENST00000514469 PICK1Q9NRD5 415 aa12.79□□□□□ -0.36
HMGXB3-205ENST00000514469 AATFQ9NY61 560 aaKnown RBP eCLIP12.79□□□□□ -0.36
HMGXB3-205ENST00000514469 PTPN22Q9Y2R2 807 aa12.79□□□□□ -0.36
HMGXB3-205ENST00000514469 FLT1P17948 1338 aa12.79□□□□□ -0.36
HMGXB3-205ENST00000514469 PDHXO00330 501 aa12.78□□□□□ -0.36
HMGXB3-205ENST00000514469 HMMRO75330 724 aa12.78□□□□□ -0.36
HMGXB3-205ENST00000514469 CHMP4BQ9H444 224 aaKnown RBP12.78□□□□□ -0.36
HMGXB3-205ENST00000514469 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.78□□□□□ -0.36
HMGXB3-205ENST00000514469 IL1RAPL2Q9NP60 686 aa12.78□□□□□ -0.36
HMGXB3-205ENST00000514469 AFG3L2Q9Y4W6 797 aa12.78□□□□□ -0.36
HMGXB3-205ENST00000514469 CDK5RAP2Q96SN8 1893 aa12.78□□□□□ -0.36
HMGXB3-205ENST00000514469 AK9Q5TCS8 1911 aa12.78□□□□□ -0.36
HMGXB3-205ENST00000514469 ZSWIM8A7E2V4 1837 aa12.77□□□□□ -0.37
HMGXB3-205ENST00000514469 MYO5AQ9Y4I1 1855 aaKnown RBP12.77□□□□□ -0.37
HMGXB3-205ENST00000514469 FAM196BA6NMK8 535 aa12.77□□□□□ -0.37
HMGXB3-205ENST00000514469 PDE3AQ14432 1141 aa12.77□□□□□ -0.37
HMGXB3-205ENST00000514469 C20orf194Q5TEA3 1177 aa12.77□□□□□ -0.37
HMGXB3-205ENST00000514469 GPAT2Q6NUI2 795 aa12.77□□□□□ -0.37
HMGXB3-205ENST00000514469 TMED8Q6PL24 325 aaPredicted RBP12.77□□□□□ -0.37
HMGXB3-205ENST00000514469 C17orf99Q6UX52 265 aa12.77□□□□□ -0.37
HMGXB3-205ENST00000514469 KIF1BPQ96EK5 621 aa12.77□□□□□ -0.37
HMGXB3-205ENST00000514469 DHX36Q9H2U1 1008 aaKnown RBP12.77□□□□□ -0.37
HMGXB3-205ENST00000514469 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.77□□□□□ -0.37
HMGXB3-205ENST00000514469 HERC5Q9UII4 1024 aaKnown RBP12.77□□□□□ -0.37
HMGXB3-205ENST00000514469 NDUFB9Q9Y6M9 179 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms