RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 NAA16Q6N069 864 aaPredicted RBP9.95□□□□□ -0.82
NEDD4-210ENST00000513957 CDC42EP5Q6NZY7 148 aa9.95□□□□□ -0.82
NEDD4-210ENST00000513957 IL27Q8NEV9 243 aa9.95□□□□□ -0.82
NEDD4-210ENST00000513957 FAM151AQ8WW52 585 aa9.95□□□□□ -0.82
NEDD4-210ENST00000513957 ECHDC1Q9NTX5 307 aa9.95□□□□□ -0.82
NEDD4-210ENST00000513957 PCDHAC2Q9Y5I4 1007 aa9.95□□□□□ -0.82
NEDD4-210ENST00000513957 DDX60LQ5H9U9 1706 aaKnown RBP9.95□□□□□ -0.82
NEDD4-210ENST00000513957 NAV1Q8NEY1 1877 aa9.95□□□□□ -0.82
NEDD4-210ENST00000513957 ATRNL1Q5VV63 1379 aa9.94□□□□□ -0.82
NEDD4-210ENST00000513957 WDR33Q9C0J8 1336 aaKnown RBP9.94□□□□□ -0.82
NEDD4-210ENST00000513957 ERC2O15083 957 aa9.94□□□□□ -0.82
NEDD4-210ENST00000513957 BTDP43251 543 aa9.94□□□□□ -0.82
NEDD4-210ENST00000513957 IREB2P48200 963 aaKnown RBP9.94□□□□□ -0.82
NEDD4-210ENST00000513957 PPP4CP60510 307 aa9.94□□□□□ -0.82
NEDD4-210ENST00000513957 HTRA3P83110 453 aa9.94□□□□□ -0.82
NEDD4-210ENST00000513957 FMR1Q06787 632 aaKnown RBP eCLIP9.94□□□□□ -0.82
NEDD4-210ENST00000513957 DCAF15Q66K64 600 aa9.94□□□□□ -0.82
NEDD4-210ENST00000513957 RGMBQ6NW40 437 aa9.94□□□□□ -0.82
NEDD4-210ENST00000513957 SMC5Q8IY18 1101 aa9.94□□□□□ -0.82
NEDD4-210ENST00000513957 CAPNS2Q96L46 248 aa9.94□□□□□ -0.82
NEDD4-210ENST00000513957 TEPSINQ96N21 525 aa9.94□□□□□ -0.82
NEDD4-210ENST00000513957 HAUS7Q99871 368 aa9.94□□□□□ -0.82
NEDD4-210ENST00000513957 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.94□□□□□ -0.82
NEDD4-210ENST00000513957 MKRN1Q9UHC7 482 aaKnown RBP9.94□□□□□ -0.82
NEDD4-210ENST00000513957 DOCK1Q14185 1865 aa9.93□□□□□ -0.82
NEDD4-210ENST00000513957 ATAD5Q96QE3 1844 aa9.93□□□□□ -0.82
NEDD4-210ENST00000513957 AOX1Q06278 1338 aa9.93□□□□□ -0.82
NEDD4-210ENST00000513957 TCP10L2B9ZVM9 353 aa9.93□□□□□ -0.82
NEDD4-210ENST00000513957 IDH1O75874 414 aaKnown RBP9.93□□□□□ -0.82
NEDD4-210ENST00000513957 VEGFBP49765 207 aa9.93□□□□□ -0.82
NEDD4-210ENST00000513957 MAP2K1Q02750 393 aaPredicted RBP9.93□□□□□ -0.82
NEDD4-210ENST00000513957 TTLL12Q14166 644 aaPredicted RBP9.93□□□□□ -0.82
NEDD4-210ENST00000513957 LRRFIP1Q32MZ4 808 aaKnown RBP9.93□□□□□ -0.82
NEDD4-210ENST00000513957 LDLRAD1Q5T700 205 aa9.93□□□□□ -0.82
NEDD4-210ENST00000513957 ZSCAN25Q6NSZ9 544 aa9.93□□□□□ -0.82
NEDD4-210ENST00000513957 TBC1D9Q6ZT07 1266 aa9.93□□□□□ -0.82
NEDD4-210ENST00000513957 TICAM2Q86XR7 235 aa9.93□□□□□ -0.82
NEDD4-210ENST00000513957 EXOC6Q8TAG9 804 aa9.93□□□□□ -0.82
NEDD4-210ENST00000513957 ZNF384Q8TF68 577 aa9.93□□□□□ -0.82
NEDD4-210ENST00000513957 TMEM39BQ9GZU3 492 aa9.93□□□□□ -0.82
NEDD4-210ENST00000513957 SNRKQ9NRH2 765 aa9.93□□□□□ -0.82
NEDD4-210ENST00000513957 USP40Q9NVE5 1235 aa9.93□□□□□ -0.82
NEDD4-210ENST00000513957 PAG1Q9NWQ8 432 aa9.93□□□□□ -0.82
NEDD4-210ENST00000513957 MYH8P13535 1937 aa9.93□□□□□ -0.82
NEDD4-210ENST00000513957 PCNTO95613 3336 aa9.93□□□□□ -0.82
NEDD4-210ENST00000513957 WDHD1O75717 1129 aaPredicted RBP9.92□□□□□ -0.82
NEDD4-210ENST00000513957 GLRX3O76003 335 aaKnown RBP9.92□□□□□ -0.82
NEDD4-210ENST00000513957 SLC10A3P09131 477 aa9.92□□□□□ -0.82
NEDD4-210ENST00000513957 MX1P20591 662 aa9.92□□□□□ -0.82
NEDD4-210ENST00000513957 RHBDL3P58872 404 aa9.92□□□□□ -0.82
NEDD4-210ENST00000513957 NBPF12Q5TAG4 269 aaPredicted RBP9.92□□□□□ -0.82
NEDD4-210ENST00000513957 ANKRD13AQ8IZ07 590 aa9.92□□□□□ -0.82
NEDD4-210ENST00000513957 DHX36Q9H2U1 1008 aaKnown RBP9.92□□□□□ -0.82
NEDD4-210ENST00000513957 PIH1D3Q9NQM4 214 aaKnown RBP9.92□□□□□ -0.82
NEDD4-210ENST00000513957 ANGEL1Q9UNK9 670 aaKnown RBP9.92□□□□□ -0.82
NEDD4-210ENST00000513957 SIPA1L1O43166 1804 aa9.91□□□□□ -0.82
NEDD4-210ENST00000513957 SALL3Q9BXA9 1300 aa9.91□□□□□ -0.82
NEDD4-210ENST00000513957 GOLIM4O00461 696 aa9.91□□□□□ -0.82
NEDD4-210ENST00000513957 PITPNM1O00562 1244 aa9.91□□□□□ -0.82
NEDD4-210ENST00000513957 CA12O43570 354 aa9.91□□□□□ -0.82
NEDD4-210ENST00000513957 SMARCA5O60264 1052 aaPredicted RBP9.91□□□□□ -0.82
NEDD4-210ENST00000513957 ZBTB48P10074 688 aaPredicted RBP9.91□□□□□ -0.82
NEDD4-210ENST00000513957 CYP7A1P22680 504 aa9.91□□□□□ -0.82
NEDD4-210ENST00000513957 RGS3P49796 1198 aa9.91□□□□□ -0.82
NEDD4-210ENST00000513957 ZNF157P51786 506 aaPredicted RBP9.91□□□□□ -0.82
NEDD4-210ENST00000513957 NFIAQ12857 509 aa9.91□□□□□ -0.82
NEDD4-210ENST00000513957 CYP4F22Q6NT55 531 aa9.91□□□□□ -0.82
NEDD4-210ENST00000513957 RASAL3Q86YV0 1011 aa9.91□□□□□ -0.82
NEDD4-210ENST00000513957 MAGEB6Q8N7X4 407 aa9.91□□□□□ -0.82
NEDD4-210ENST00000513957 DNAJC2Q99543 621 aaKnown RBP9.91□□□□□ -0.82
NEDD4-210ENST00000513957 BOLA2Q9H3K6 86 aa9.91□□□□□ -0.82
NEDD4-210ENST00000513957 FAM198AQ9UFP1 575 aa9.91□□□□□ -0.82
NEDD4-210ENST00000513957 PTPRFP10586 1907 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 FAM155AB1AL88 458 aaPredicted RBP9.9□□□□□ -0.82
NEDD4-210ENST00000513957 TBC1D12O60347 775 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 ZFYP08048 801 aaPredicted RBP9.9□□□□□ -0.82
NEDD4-210ENST00000513957 PDE6AP16499 860 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 ADD2P35612 726 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 CACNB3P54284 484 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 MAP3K10Q02779 954 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 UBE3CQ15386 1083 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 SLC9C2Q5TAH2 1124 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 ANKRD45Q5TZF3 282 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 PRAMEF18Q5VWM3 479 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 DLK2Q6UY11 383 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 TEX11Q8IYF3 940 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 KBTBD3Q8NAB2 608 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.9□□□□□ -0.82
NEDD4-210ENST00000513957 BEGAINQ9BUH8 593 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 ZNF341Q9BYN7 854 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 OSBPL5Q9H0X9 879 aaPredicted RBP9.9□□□□□ -0.82
NEDD4-210ENST00000513957 KDM4CQ9H3R0 1056 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 ANTXR1Q9H6X2 564 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 AATFQ9NY61 560 aaKnown RBP eCLIP9.9□□□□□ -0.82
NEDD4-210ENST00000513957 STAP2Q9UGK3 403 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 SCAF8Q9UPN6 1271 aaKnown RBP9.9□□□□□ -0.82
NEDD4-210ENST00000513957 CSADQ9Y600 493 aa9.9□□□□□ -0.82
NEDD4-210ENST00000513957 PHIPQ8WWQ0 1821 aa9.89□□□□□ -0.83
NEDD4-210ENST00000513957 FLT1P17948 1338 aa9.89□□□□□ -0.83
NEDD4-210ENST00000513957 USP2O75604 605 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms