RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 BRPF3Q9ULD4 1205 aa7.57□□□□□ -1.2
LINC01088-210ENST00000513153 PPP1R9AQ9ULJ8 1098 aa7.57□□□□□ -1.2
LINC01088-210ENST00000513153 TMEM265A0A087WTH1 108 aa7.56□□□□□ -1.2
LINC01088-210ENST00000513153 DDX54Q8TDD1 881 aaKnown RBP7.56□□□□□ -1.2
LINC01088-210ENST00000513153 LIN37Q96GY3 246 aaPredicted RBP7.56□□□□□ -1.2
LINC01088-210ENST00000513153 WDR18Q9BV38 432 aa7.56□□□□□ -1.2
LINC01088-210ENST00000513153 KRTAP9-3Q9BYQ3 159 aa7.56□□□□□ -1.2
LINC01088-210ENST00000513153 NPHS2Q9NP85 383 aa7.56□□□□□ -1.2
LINC01088-210ENST00000513153 PRDM7Q9NQW5 492 aa7.56□□□□□ -1.2
LINC01088-210ENST00000513153 CEACAM5P06731 702 aa7.55□□□□□ -1.2
LINC01088-210ENST00000513153 B4GALNT3Q6L9W6 998 aa7.55□□□□□ -1.2
LINC01088-210ENST00000513153 TTLL10Q6ZVT0 673 aa7.55□□□□□ -1.2
LINC01088-210ENST00000513153 SYDE1Q6ZW31 735 aaPredicted RBP7.55□□□□□ -1.2
LINC01088-210ENST00000513153 GLYCTKQ8IVS8 523 aa7.55□□□□□ -1.2
LINC01088-210ENST00000513153 PIDD1Q9HB75 910 aa7.55□□□□□ -1.2
LINC01088-210ENST00000513153 MKNK2Q9HBH9 465 aa7.55□□□□□ -1.2
LINC01088-210ENST00000513153 ABCB6Q9NP58 842 aa7.55□□□□□ -1.2
LINC01088-210ENST00000513153 CPNE3O75131 537 aaKnown RBP7.54□□□□□ -1.2
LINC01088-210ENST00000513153 OXCT1P55809 520 aa7.54□□□□□ -1.2
LINC01088-210ENST00000513153 PTPN12Q05209 780 aaKnown RBP7.54□□□□□ -1.2
LINC01088-210ENST00000513153 PLAGL2Q9UPG8 496 aa7.54□□□□□ -1.2
LINC01088-210ENST00000513153 GPR182O15218 404 aa7.53□□□□□ -1.2
LINC01088-210ENST00000513153 PRPF40BQ6NWY9 871 aaKnown RBP7.53□□□□□ -1.2
LINC01088-210ENST00000513153 EHD4Q9H223 541 aa7.53□□□□□ -1.2
LINC01088-210ENST00000513153 SYNGAP1Q96PV0 1343 aa7.52□□□□□ -1.2
LINC01088-210ENST00000513153 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.52□□□□□ -1.21
LINC01088-210ENST00000513153 TMPRSS2O15393 492 aa7.52□□□□□ -1.21
LINC01088-210ENST00000513153 NDUFB5O43674 189 aa7.52□□□□□ -1.21
LINC01088-210ENST00000513153 LEFTY1O75610 366 aa7.52□□□□□ -1.21
LINC01088-210ENST00000513153 NEFLP07196 543 aa7.52□□□□□ -1.21
LINC01088-210ENST00000513153 PRR23BQ6ZRT6 265 aa7.52□□□□□ -1.21
LINC01088-210ENST00000513153 ERICH6Q7L0X2 663 aa7.52□□□□□ -1.21
LINC01088-210ENST00000513153 TXNDC2Q86VQ3 553 aa7.52□□□□□ -1.21
LINC01088-210ENST00000513153 RAPGEFL1Q9UHV5 662 aa7.52□□□□□ -1.21
LINC01088-210ENST00000513153 EIF1AYO14602 144 aaKnown RBP7.51□□□□□ -1.21
LINC01088-210ENST00000513153 ITIH2P19823 946 aa7.51□□□□□ -1.21
LINC01088-210ENST00000513153 FAAP100Q0VG06 881 aa7.51□□□□□ -1.21
LINC01088-210ENST00000513153 PDE3BQ13370 1112 aa7.51□□□□□ -1.21
LINC01088-210ENST00000513153 CCDC74AQ96AQ1 378 aa7.51□□□□□ -1.21
LINC01088-210ENST00000513153 CITED4Q96RK1 184 aa7.51□□□□□ -1.21
LINC01088-210ENST00000513153 ATXN3LQ9H3M9 355 aa7.51□□□□□ -1.21
LINC01088-210ENST00000513153 C1QTNF9P0C862 333 aa7.5□□□□□ -1.21
LINC01088-210ENST00000513153 LIG1P18858 919 aa7.5□□□□□ -1.21
LINC01088-210ENST00000513153 ZP2Q05996 745 aa7.5□□□□□ -1.21
LINC01088-210ENST00000513153 SMYD4Q8IYR2 804 aaPredicted RBP7.5□□□□□ -1.21
LINC01088-210ENST00000513153 WDR89Q96FK6 387 aaPredicted RBP7.5□□□□□ -1.21
LINC01088-210ENST00000513153 FANCD2OSQ96PS1 177 aa7.5□□□□□ -1.21
LINC01088-210ENST00000513153 DUSP23Q9BVJ7 150 aa7.5□□□□□ -1.21
LINC01088-210ENST00000513153 DNAJC25Q9H1X3 360 aa7.5□□□□□ -1.21
LINC01088-210ENST00000513153 CTNND2Q9UQB3 1225 aa7.5□□□□□ -1.21
LINC01088-210ENST00000513153 TMEM238LA0A1B0GVL6 79 aa7.49□□□□□ -1.21
LINC01088-210ENST00000513153 NFIBO00712 420 aa7.49□□□□□ -1.21
LINC01088-210ENST00000513153 AFMP43652 599 aa7.49□□□□□ -1.21
LINC01088-210ENST00000513153 AP3B2Q13367 1082 aa7.49□□□□□ -1.21
LINC01088-210ENST00000513153 IKZF1Q13422 519 aa7.49□□□□□ -1.21
LINC01088-210ENST00000513153 RPS26P11Q5JNZ5 115 aaPredicted RBP7.49□□□□□ -1.21
LINC01088-210ENST00000513153 FYB2Q5VWT5 728 aa7.49□□□□□ -1.21
LINC01088-210ENST00000513153 MPZL3Q6UWV2 235 aa7.49□□□□□ -1.21
LINC01088-210ENST00000513153 ARID3AQ99856 593 aa7.49□□□□□ -1.21
LINC01088-210ENST00000513153 SNX11Q9Y5W9 270 aa7.49□□□□□ -1.21
LINC01088-210ENST00000513153 SUPT5HO00267 1087 aaKnown RBP7.48□□□□□ -1.21
LINC01088-210ENST00000513153 RNGTTO60942 597 aaKnown RBP7.48□□□□□ -1.21
LINC01088-210ENST00000513153 GLI1P08151 1106 aa7.48□□□□□ -1.21
LINC01088-210ENST00000513153 SLFN14P0C7P3 912 aa7.48□□□□□ -1.21
LINC01088-210ENST00000513153 ID3Q02535 119 aa7.48□□□□□ -1.21
LINC01088-210ENST00000513153 GRM2Q14416 872 aa7.48□□□□□ -1.21
LINC01088-210ENST00000513153 ALKBH8Q96BT7 664 aaKnown RBP7.48□□□□□ -1.21
LINC01088-210ENST00000513153 NIF3L1Q9GZT8 377 aa7.48□□□□□ -1.21
LINC01088-210ENST00000513153 TNKS2Q9H2K2 1166 aa7.48□□□□□ -1.21
LINC01088-210ENST00000513153 CCDC86Q9H6F5 360 aaKnown RBP7.48□□□□□ -1.21
LINC01088-210ENST00000513153 PCDHGC5Q9Y5F6 944 aa7.48□□□□□ -1.21
LINC01088-210ENST00000513153 ZNF862O60290 1169 aa7.47□□□□□ -1.21
LINC01088-210ENST00000513153 PDE4CQ08493 712 aa7.47□□□□□ -1.21
LINC01088-210ENST00000513153 ASB11Q8WXH4 323 aa7.47□□□□□ -1.21
LINC01088-210ENST00000513153 DISC1Q9NRI5 854 aa7.47□□□□□ -1.21
LINC01088-210ENST00000513153 KRT1P04264 644 aa7.46□□□□□ -1.22
LINC01088-210ENST00000513153 INHBBP09529 407 aa7.46□□□□□ -1.22
LINC01088-210ENST00000513153 ZNF157P51786 506 aaPredicted RBP7.46□□□□□ -1.22
LINC01088-210ENST00000513153 TTLL4Q14679 1199 aa7.46□□□□□ -1.22
LINC01088-210ENST00000513153 TOP6BLQ8N6T0 577 aa7.46□□□□□ -1.22
LINC01088-210ENST00000513153 EPS8L3Q8TE67 593 aaKnown RBP7.46□□□□□ -1.22
LINC01088-210ENST00000513153 CSRNP1Q96S65 589 aa7.46□□□□□ -1.22
LINC01088-210ENST00000513153 ZC3H12CQ9C0D7 883 aaKnown RBP7.46□□□□□ -1.22
LINC01088-210ENST00000513153 PCOLCE2Q9UKZ9 415 aa7.46□□□□□ -1.22
LINC01088-210ENST00000513153 NPIPB6E9PJ23 425 aa7.45□□□□□ -1.22
LINC01088-210ENST00000513153 HCLS1P14317 486 aaPredicted RBP7.45□□□□□ -1.22
LINC01088-210ENST00000513153 CTSWP56202 376 aa7.45□□□□□ -1.22
LINC01088-210ENST00000513153 KIF4BQ2VIQ3 1234 aa7.45□□□□□ -1.22
LINC01088-210ENST00000513153 PDZD3Q86UT5 571 aa7.45□□□□□ -1.22
LINC01088-210ENST00000513153 AMIGO3Q86WK7 504 aa7.45□□□□□ -1.22
LINC01088-210ENST00000513153 KIRREL1Q96J84 757 aa7.45□□□□□ -1.22
LINC01088-210ENST00000513153 RBCK1Q9BYM8 510 aa7.45□□□□□ -1.22
LINC01088-210ENST00000513153 GADD45BO75293 160 aaPredicted RBP7.44□□□□□ -1.22
LINC01088-210ENST00000513153 TMEM67Q5HYA8 995 aa7.44□□□□□ -1.22
LINC01088-210ENST00000513153 FBXO15Q8NCQ5 510 aaPredicted RBP7.44□□□□□ -1.22
LINC01088-210ENST00000513153 DMRTB1Q96MA1 342 aa7.44□□□□□ -1.22
LINC01088-210ENST00000513153 TRAK1Q9UPV9 953 aa7.44□□□□□ -1.22
LINC01088-210ENST00000513153 GSTP1P09211 210 aaKnown RBP7.43□□□□□ -1.22
LINC01088-210ENST00000513153 PI16Q6UXB8 463 aa7.43□□□□□ -1.22
LINC01088-210ENST00000513153 RETREG2Q8NC44 543 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms