RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 HACL1Q9UJ83 578 aa14.97□□□□□ -0.01
PDPN-210ENST00000513143 RBM8AQ9Y5S9 174 aaKnown RBP14.97□□□□□ -0.01
PDPN-210ENST00000513143 ZMYM6O95789 1325 aa14.97□□□□□ -0.01
PDPN-210ENST00000513143 DDX60LQ5H9U9 1706 aaKnown RBP14.96□□□□□ -0.01
PDPN-210ENST00000513143 USP5P45974 858 aa14.96□□□□□ -0.01
PDPN-210ENST00000513143 NECTIN1Q15223 517 aa14.96□□□□□ -0.01
PDPN-210ENST00000513143 FKBP1CQ5VVH2 108 aa14.96□□□□□ -0.01
PDPN-210ENST00000513143 UPF2Q9HAU5 1272 aaKnown RBP14.96□□□□□ -0.01
PDPN-210ENST00000513143 CTNNA3Q9UI47 895 aa14.96□□□□□ -0.01
PDPN-210ENST00000513143 POLR2AP24928 1970 aaKnown RBP14.96□□□□□ -0.01
PDPN-210ENST00000513143 LAMA4Q16363 1823 aa14.96□□□□□ -0.01
PDPN-210ENST00000513143 FLT1P17948 1338 aa14.95□□□□□ -0.02
PDPN-210ENST00000513143 IQCA1LA6NCM1 817 aa14.95□□□□□ -0.02
PDPN-210ENST00000513143 POTECB2RU33 542 aa14.95□□□□□ -0.02
PDPN-210ENST00000513143 HIRAP54198 1017 aaPredicted RBP14.95□□□□□ -0.02
PDPN-210ENST00000513143 NFIAQ12857 509 aa14.95□□□□□ -0.02
PDPN-210ENST00000513143 MAPKAPK5Q8IW41 473 aa14.95□□□□□ -0.02
PDPN-210ENST00000513143 DDRGK1Q96HY6 314 aa14.95□□□□□ -0.02
PDPN-210ENST00000513143 NAPBQ9H115 298 aa14.95□□□□□ -0.02
PDPN-210ENST00000513143 DDX4Q9NQI0 724 aaKnown RBP14.95□□□□□ -0.02
PDPN-210ENST00000513143 TMOD2Q9NZR1 351 aa14.95□□□□□ -0.02
PDPN-210ENST00000513143 FAM198AQ9UFP1 575 aa14.95□□□□□ -0.02
PDPN-210ENST00000513143 CLRN2A0PK11 232 aa14.94□□□□□ -0.02
PDPN-210ENST00000513143 ENTPD3O75355 529 aa14.94□□□□□ -0.02
PDPN-210ENST00000513143 EPHX2P34913 555 aa14.94□□□□□ -0.02
PDPN-210ENST00000513143 HSPA4P34932 840 aa14.94□□□□□ -0.02
PDPN-210ENST00000513143 TDO2P48775 406 aa14.94□□□□□ -0.02
PDPN-210ENST00000513143 CACNB3P54284 484 aa14.94□□□□□ -0.02
PDPN-210ENST00000513143 SBK1Q52WX2 424 aa14.94□□□□□ -0.02
PDPN-210ENST00000513143 USP50Q70EL3 339 aaPredicted RBP14.94□□□□□ -0.02
PDPN-210ENST00000513143 TAF1DQ9H5J8 278 aaPredicted RBP14.94□□□□□ -0.02
PDPN-210ENST00000513143 LAMB1P07942 1786 aa14.94□□□□□ -0.02
PDPN-210ENST00000513143 USP17L12C9JPN9 530 aa14.93□□□□□ -0.02
PDPN-210ENST00000513143 USP17L21D6R901 530 aa14.93□□□□□ -0.02
PDPN-210ENST00000513143 PICALMQ13492 652 aa14.93□□□□□ -0.02
PDPN-210ENST00000513143 CTR9Q6PD62 1173 aa14.93□□□□□ -0.02
PDPN-210ENST00000513143 FAM83AQ86UY5 434 aa14.93□□□□□ -0.02
PDPN-210ENST00000513143 KCNB2Q92953 911 aa14.93□□□□□ -0.02
PDPN-210ENST00000513143 C22orf23Q9BZE7 217 aa14.93□□□□□ -0.02
PDPN-210ENST00000513143 OSBPL5Q9H0X9 879 aaPredicted RBP14.93□□□□□ -0.02
PDPN-210ENST00000513143 MCM9Q9NXL9 1143 aa14.93□□□□□ -0.02
PDPN-210ENST00000513143 ARPP21Q9UBL0 812 aaPredicted RBP14.93□□□□□ -0.02
PDPN-210ENST00000513143 COL2A1P02458 1487 aaPredicted RBP14.93□□□□□ -0.02
PDPN-210ENST00000513143 ASTN2O75129 1339 aaPredicted RBP14.93□□□□□ -0.02
PDPN-210ENST00000513143 TCP10L2B9ZVM9 353 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 SLC27A2O14975 620 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 CYP21A2P08686 494 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 MCCP23508 829 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 RBM25P49756 843 aaKnown RBP14.92□□□□□ -0.02
PDPN-210ENST00000513143 CREB3L3Q68CJ9 461 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 ZFPM1Q8IX07 1006 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 VEZTQ9HBM0 779 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 CNTNAP1P78357 1384 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 PITPNM2Q9BZ72 1349 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 VEGFAP15692 232 aaPredicted RBP14.92□□□□□ -0.02
PDPN-210ENST00000513143 TCP10Q12799 353 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 TNFAIP1Q13829 316 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 IMMTQ16891 758 aaKnown RBP14.92□□□□□ -0.02
PDPN-210ENST00000513143 TSGA10IPQ3SY00 556 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 C12orf60Q5U649 245 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 ANGEL2Q5VTE6 544 aaKnown RBP14.92□□□□□ -0.02
PDPN-210ENST00000513143 RNF20Q5VTR2 975 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 PNMA8AQ86V59 439 aaPredicted RBP14.92□□□□□ -0.02
PDPN-210ENST00000513143 APOBEC3FQ8IUX4 373 aaKnown RBP14.92□□□□□ -0.02
PDPN-210ENST00000513143 ZC3H15Q8WU90 426 aaKnown RBP14.92□□□□□ -0.02
PDPN-210ENST00000513143 FAM151AQ8WW52 585 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 TBC1D32Q96NH3 1257 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 RRAGCQ9HB90 399 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 SAP30BPQ9UHR5 308 aaKnown RBP14.92□□□□□ -0.02
PDPN-210ENST00000513143 ANAPC4Q9UJX5 808 aa14.92□□□□□ -0.02
PDPN-210ENST00000513143 ATRNL1Q5VV63 1379 aa14.91□□□□□ -0.02
PDPN-210ENST00000513143 MINDY4BA8MYZ0 360 aa14.91□□□□□ -0.02
PDPN-210ENST00000513143 ZNF213O14771 459 aa14.91□□□□□ -0.02
PDPN-210ENST00000513143 POLR3DP05423 398 aaPredicted RBP14.91□□□□□ -0.02
PDPN-210ENST00000513143 TNNI2P48788 182 aa14.91□□□□□ -0.02
PDPN-210ENST00000513143 PPARAQ07869 468 aa14.91□□□□□ -0.02
PDPN-210ENST00000513143 AMOTL1Q8IY63 956 aa14.91□□□□□ -0.02
PDPN-210ENST00000513143 IL17RAQ96F46 866 aa14.91□□□□□ -0.02
PDPN-210ENST00000513143 DHX36Q9H2U1 1008 aaKnown RBP14.91□□□□□ -0.02
PDPN-210ENST00000513143 GGA3Q9NZ52 723 aa14.91□□□□□ -0.02
PDPN-210ENST00000513143 PGAP2Q9UHJ9 254 aa14.91□□□□□ -0.02
PDPN-210ENST00000513143 PALD1Q9ULE6 856 aa14.91□□□□□ -0.02
PDPN-210ENST00000513143 SIPA1L1O43166 1804 aa14.9□□□□□ -0.02
PDPN-210ENST00000513143 CYP2D7A0A087X1C5 515 aa14.9□□□□□ -0.02
PDPN-210ENST00000513143 DDTLA6NHG4 134 aaPredicted RBP14.9□□□□□ -0.02
PDPN-210ENST00000513143 CYP2D6P10635 497 aa14.9□□□□□ -0.02
PDPN-210ENST00000513143 ZKSCAN1P17029 563 aaPredicted RBP14.9□□□□□ -0.02
PDPN-210ENST00000513143 PLCD1P51178 756 aa14.9□□□□□ -0.02
PDPN-210ENST00000513143 ANAPC15P60006 121 aa14.9□□□□□ -0.02
PDPN-210ENST00000513143 HAND2P61296 217 aa14.9□□□□□ -0.02
PDPN-210ENST00000513143 SH3BP5LQ7L8J4 393 aa14.9□□□□□ -0.02
PDPN-210ENST00000513143 TTC6Q86TZ1 520 aa14.9□□□□□ -0.02
PDPN-210ENST00000513143 RASEFQ8IZ41 740 aa14.9□□□□□ -0.02
PDPN-210ENST00000513143 NBPF3Q9H094 633 aa14.9□□□□□ -0.02
PDPN-210ENST00000513143 SNX14Q9Y5W7 946 aa14.9□□□□□ -0.02
PDPN-210ENST00000513143 TAF6LQ9Y6J9 622 aa14.9□□□□□ -0.02
PDPN-210ENST00000513143 ROBO3Q96MS0 1386 aa14.89□□□□□ -0.03
PDPN-210ENST00000513143 EVX2Q03828 476 aa14.89□□□□□ -0.03
PDPN-210ENST00000513143 RASA3Q14644 834 aa14.89□□□□□ -0.03
PDPN-210ENST00000513143 DEFB129Q9H1M3 183 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms