RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 PCDHB5Q9Y5E4 795 aa7.78□□□□□ -1.16
CHD1-210ENST00000513064 FSTP19883 344 aa7.77□□□□□ -1.17
CHD1-210ENST00000513064 RXRBP28702 533 aa7.77□□□□□ -1.17
CHD1-210ENST00000513064 RING1Q06587 406 aa7.77□□□□□ -1.17
CHD1-210ENST00000513064 PWP1Q13610 501 aa7.77□□□□□ -1.17
CHD1-210ENST00000513064 RNF43Q68DV7 783 aa7.77□□□□□ -1.17
CHD1-210ENST00000513064 TMEM87AQ8NBN3 555 aa7.77□□□□□ -1.17
CHD1-210ENST00000513064 MIR1-1HGQ9H1L0 117 aa7.77□□□□□ -1.17
CHD1-210ENST00000513064 SEMA6CQ9H3T2 930 aa7.77□□□□□ -1.17
CHD1-210ENST00000513064 TLR6Q9Y2C9 796 aa7.77□□□□□ -1.17
CHD1-210ENST00000513064 UNCXA6NJT0 531 aa7.76□□□□□ -1.17
CHD1-210ENST00000513064 GSC2O15499 205 aa7.76□□□□□ -1.17
CHD1-210ENST00000513064 NFICP08651 508 aa7.76□□□□□ -1.17
CHD1-210ENST00000513064 LMNB1P20700 586 aa7.76□□□□□ -1.17
CHD1-210ENST00000513064 MAP7Q14244 749 aa7.76□□□□□ -1.17
CHD1-210ENST00000513064 PAOXQ6QHF9 649 aa7.76□□□□□ -1.17
CHD1-210ENST00000513064 CCDC84Q86UT8 332 aaPredicted RBP7.76□□□□□ -1.17
CHD1-210ENST00000513064 RELL1Q8IUW5 271 aa7.76□□□□□ -1.17
CHD1-210ENST00000513064 RNF214Q8ND24 703 aa7.76□□□□□ -1.17
CHD1-210ENST00000513064 MRRFQ96E11 262 aaKnown RBP7.76□□□□□ -1.17
CHD1-210ENST00000513064 TMEM74Q96NL1 305 aa7.76□□□□□ -1.17
CHD1-210ENST00000513064 KIAA1522Q9P206 1035 aaPredicted RBP7.76□□□□□ -1.17
CHD1-210ENST00000513064 RECKO95980 971 aa7.75□□□□□ -1.17
CHD1-210ENST00000513064 RAB6AP20340 208 aa7.75□□□□□ -1.17
CHD1-210ENST00000513064 LMNB2Q03252 620 aa7.75□□□□□ -1.17
CHD1-210ENST00000513064 NFIAQ12857 509 aa7.75□□□□□ -1.17
CHD1-210ENST00000513064 SEPT6Q14141 434 aa7.75□□□□□ -1.17
CHD1-210ENST00000513064 INPP5AQ14642 412 aa7.75□□□□□ -1.17
CHD1-210ENST00000513064 TTLL4Q14679 1199 aa7.75□□□□□ -1.17
CHD1-210ENST00000513064 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.75□□□□□ -1.17
CHD1-210ENST00000513064 RHOVQ96L33 236 aa7.75□□□□□ -1.17
CHD1-210ENST00000513064 PIDD1Q9HB75 910 aa7.75□□□□□ -1.17
CHD1-210ENST00000513064 SNCAIPQ9Y6H5 919 aa7.75□□□□□ -1.17
CHD1-210ENST00000513064 DCDC2CA8MYV0 355 aa7.74□□□□□ -1.17
CHD1-210ENST00000513064 FANCGO15287 622 aa7.74□□□□□ -1.17
CHD1-210ENST00000513064 IGLV1-40P01703 118 aa7.74□□□□□ -1.17
CHD1-210ENST00000513064 PF4P02776 101 aa7.74□□□□□ -1.17
CHD1-210ENST00000513064 NEFMP07197 916 aa7.74□□□□□ -1.17
CHD1-210ENST00000513064 GBP2P32456 591 aaPredicted RBP7.74□□□□□ -1.17
CHD1-210ENST00000513064 NTF4P34130 210 aa7.74□□□□□ -1.17
CHD1-210ENST00000513064 CAMK2GQ13555 558 aaPredicted RBP7.74□□□□□ -1.17
CHD1-210ENST00000513064 NFKBIBQ15653 356 aa7.74□□□□□ -1.17
CHD1-210ENST00000513064 TSNAXIP1Q2TAA8 658 aa7.74□□□□□ -1.17
CHD1-210ENST00000513064 LRFN4Q6PJG9 635 aa7.74□□□□□ -1.17
CHD1-210ENST00000513064 SEZ6L2Q6UXD5 910 aa7.74□□□□□ -1.17
CHD1-210ENST00000513064 CYFIP1Q7L576 1253 aa7.74□□□□□ -1.17
CHD1-210ENST00000513064 HS2ST1Q7LGA3 356 aa7.74□□□□□ -1.17
CHD1-210ENST00000513064 C12orf40Q86WS4 652 aa7.74□□□□□ -1.17
CHD1-210ENST00000513064 SMYD4Q8IYR2 804 aaPredicted RBP7.74□□□□□ -1.17
CHD1-210ENST00000513064 DBNDD2Q9BQY9 259 aa7.74□□□□□ -1.17
CHD1-210ENST00000513064 COPRSQ9NQ92 184 aa7.74□□□□□ -1.17
CHD1-210ENST00000513064 METTL5Q9NRN9 209 aaKnown RBP7.74□□□□□ -1.17
CHD1-210ENST00000513064 KBTBD4Q9NVX7 518 aa7.74□□□□□ -1.17
CHD1-210ENST00000513064 GGT7Q9UJ14 662 aa7.74□□□□□ -1.17
CHD1-210ENST00000513064 F6X3S4 739 aa7.73□□□□□ -1.17
CHD1-210ENST00000513064 GFRA2O00451 464 aa7.73□□□□□ -1.17
CHD1-210ENST00000513064 HCLS1P14317 486 aaPredicted RBP7.73□□□□□ -1.17
CHD1-210ENST00000513064 PPM1JQ5JR12 505 aa7.73□□□□□ -1.17
CHD1-210ENST00000513064 HDXQ7Z353 690 aa7.73□□□□□ -1.17
CHD1-210ENST00000513064 PLPPR2Q96GM1 343 aa7.73□□□□□ -1.17
CHD1-210ENST00000513064 PRKAG2Q9UGJ0 569 aa7.73□□□□□ -1.17
CHD1-210ENST00000513064 CSADQ9Y600 493 aa7.73□□□□□ -1.17
CHD1-210ENST00000513064 FAM221AA4D161 298 aa7.72□□□□□ -1.17
CHD1-210ENST00000513064 DYNC1LI2O43237 492 aaPredicted RBP7.72□□□□□ -1.17
CHD1-210ENST00000513064 ZNF76P36508 570 aa7.72□□□□□ -1.17
CHD1-210ENST00000513064 CDK8P49336 464 aa7.72□□□□□ -1.17
CHD1-210ENST00000513064 FANCCQ00597 558 aa7.72□□□□□ -1.17
CHD1-210ENST00000513064 ZBTB37Q5TC79 503 aa7.72□□□□□ -1.17
CHD1-210ENST00000513064 GATA6Q92908 595 aa7.72□□□□□ -1.17
CHD1-210ENST00000513064 ISL2Q96A47 359 aa7.72□□□□□ -1.17
CHD1-210ENST00000513064 ELMO3Q96BJ8 720 aa7.72□□□□□ -1.17
CHD1-210ENST00000513064 KCNQ5Q9NR82 932 aa7.72□□□□□ -1.17
CHD1-210ENST00000513064 C1GALT1Q9NS00 363 aa7.72□□□□□ -1.17
CHD1-210ENST00000513064 PCOLCE2Q9UKZ9 415 aa7.72□□□□□ -1.17
CHD1-210ENST00000513064 DAGLAQ9Y4D2 1042 aa7.72□□□□□ -1.17
CHD1-210ENST00000513064 MINDY4BA8MYZ0 360 aa7.71□□□□□ -1.18
CHD1-210ENST00000513064 SCAMP3O14828 347 aaKnown RBP7.71□□□□□ -1.18
CHD1-210ENST00000513064 RNGTTO60942 597 aaKnown RBP7.71□□□□□ -1.18
CHD1-210ENST00000513064 GARTP22102 1010 aa7.71□□□□□ -1.18
CHD1-210ENST00000513064 WIPI1Q5MNZ9 446 aaPredicted RBP7.71□□□□□ -1.18
CHD1-210ENST00000513064 BNC2Q6ZN30 1099 aaPredicted RBP7.71□□□□□ -1.18
CHD1-210ENST00000513064 GATAD2BQ8WXI9 593 aa7.71□□□□□ -1.18
CHD1-210ENST00000513064 JARID2Q92833 1246 aaPredicted RBP7.71□□□□□ -1.18
CHD1-210ENST00000513064 TACC3Q9Y6A5 838 aa7.71□□□□□ -1.18
CHD1-210ENST00000513064 CILPO75339 1184 aa7.7□□□□□ -1.18
CHD1-210ENST00000513064 ADMP35318 185 aa7.7□□□□□ -1.18
CHD1-210ENST00000513064 RPL6Q02878 288 aaKnown RBP7.7□□□□□ -1.18
CHD1-210ENST00000513064 ZAR1Q86SH2 424 aa7.7□□□□□ -1.18
CHD1-210ENST00000513064 ZDHHC13Q8IUH4 622 aa7.7□□□□□ -1.18
CHD1-210ENST00000513064 MFSD14AQ96MC6 490 aa7.7□□□□□ -1.18
CHD1-210ENST00000513064 PSMG3-AS1Q96PY0 264 aa7.7□□□□□ -1.18
CHD1-210ENST00000513064 WNT10AQ9GZT5 417 aa7.7□□□□□ -1.18
CHD1-210ENST00000513064 F13A1P00488 732 aa7.69□□□□□ -1.18
CHD1-210ENST00000513064 F13BP05160 661 aa7.69□□□□□ -1.18
CHD1-210ENST00000513064 EIF4A3P38919 411 aaKnown RBP7.69□□□□□ -1.18
CHD1-210ENST00000513064 DIEXFQ68CQ4 756 aaKnown RBP7.69□□□□□ -1.18
CHD1-210ENST00000513064 FBXL19Q6PCT2 694 aa7.69□□□□□ -1.18
CHD1-210ENST00000513064 GOLM1Q8NBJ4 401 aa7.69□□□□□ -1.18
CHD1-210ENST00000513064 SHKBP1Q8TBC3 707 aa7.69□□□□□ -1.18
CHD1-210ENST00000513064 RNF34Q969K3 372 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms