RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 CXCL9Q07325 125 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 BECN1Q14457 450 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 SBK1Q52WX2 424 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 APOBEC3HQ6NTF7 200 aaKnown RBP11.12□□□□□ -0.63
DHFR-206ENST00000513048 RSBN1LQ6PCB5 846 aaPredicted RBP11.12□□□□□ -0.63
DHFR-206ENST00000513048 CTR9Q6PD62 1173 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 CERS3Q8IU89 383 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 KIAA0825Q8IV33 1275 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 ZDHHC15Q96MV8 337 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 NEK1Q96PY6 1258 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 NACAP1Q9BZK3 213 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 NAPBQ9H115 298 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 ATP8A2Q9NTI2 1148 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 ANAPC4Q9UJX5 808 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 MYO3BQ8WXR4 1341 aa11.11□□□□□ -0.63
DHFR-206ENST00000513048 K7ELQ4 463 aaPredicted RBP11.11□□□□□ -0.63
DHFR-206ENST00000513048 FZD9O00144 591 aa11.11□□□□□ -0.63
DHFR-206ENST00000513048 ST18O60284 1047 aa11.11□□□□□ -0.63
DHFR-206ENST00000513048 CD44P16070 742 aaKnown RBP11.11□□□□□ -0.63
DHFR-206ENST00000513048 YBX3P16989 372 aaKnown RBP eCLIP11.11□□□□□ -0.637e-10■□□□□ 10
DHFR-206ENST00000513048 TDO2P48775 406 aa11.11□□□□□ -0.63
DHFR-206ENST00000513048 AK2P54819 239 aa11.11□□□□□ -0.63
DHFR-206ENST00000513048 BLOC1S2Q6QNY1 142 aa11.11□□□□□ -0.63
DHFR-206ENST00000513048 HSCBQ8IWL3 235 aa11.11□□□□□ -0.63
DHFR-206ENST00000513048 MB21D2Q8IYB1 491 aaPredicted RBP11.11□□□□□ -0.63
DHFR-206ENST00000513048 TEKT1Q969V4 418 aa11.11□□□□□ -0.63
DHFR-206ENST00000513048 SERPINA10Q9UK55 444 aa11.11□□□□□ -0.63
DHFR-206ENST00000513048 PCDHAC2Q9Y5I4 1007 aa11.11□□□□□ -0.63
DHFR-206ENST00000513048 CYP46A1Q9Y6A2 500 aa11.11□□□□□ -0.63
DHFR-206ENST00000513048 CYP2D7A0A087X1C5 515 aa11.1□□□□□ -0.63
DHFR-206ENST00000513048 USP17L12C9JPN9 530 aa11.1□□□□□ -0.63
DHFR-206ENST00000513048 USP17L21D6R901 530 aa11.1□□□□□ -0.63
DHFR-206ENST00000513048 FGRP09769 529 aa11.1□□□□□ -0.63
DHFR-206ENST00000513048 CYP2D6P10635 497 aa11.1□□□□□ -0.63
DHFR-206ENST00000513048 PLCG2P16885 1265 aa11.1□□□□□ -0.63
DHFR-206ENST00000513048 CTDSPL2Q05D32 466 aa11.1□□□□□ -0.63
DHFR-206ENST00000513048 PPARAQ07869 468 aa11.1□□□□□ -0.63
DHFR-206ENST00000513048 TOB2Q14106 344 aaPredicted RBP11.1□□□□□ -0.63
DHFR-206ENST00000513048 CDC42EP5Q6NZY7 148 aa11.1□□□□□ -0.63
DHFR-206ENST00000513048 DHX32Q7L7V1 743 aaKnown RBP11.1□□□□□ -0.63
DHFR-206ENST00000513048 STAG1Q8WVM7 1258 aa11.1□□□□□ -0.63
DHFR-206ENST00000513048 NOL10Q9BSC4 688 aaKnown RBP11.1□□□□□ -0.63
DHFR-206ENST00000513048 INCENPQ9NQS7 918 aa11.1□□□□□ -0.63
DHFR-206ENST00000513048 PDRG1Q9NUG6 133 aa11.1□□□□□ -0.63
DHFR-206ENST00000513048 NEDD4P46934 1319 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 MYH1P12882 1939 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 ROBO3Q96MS0 1386 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 SOCS7O14512 581 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 WDHD1O75717 1129 aaPredicted RBP11.09□□□□□ -0.63
DHFR-206ENST00000513048 HMGB1P09429 215 aaKnown RBP11.09□□□□□ -0.63
DHFR-206ENST00000513048 USP17L8P0C7I0 530 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 MCM2P49736 904 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 ANTXR2P58335 489 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 AKNAD1Q5T1N1 836 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 CIAPIN1Q6FI81 312 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 TEX11Q8IYF3 940 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 FBXL16Q8N461 479 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 AGBL3Q8NEM8 1001 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 TGFBRAP1Q8WUH2 860 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 JDP2Q8WYK2 163 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 ZBED3Q96IU2 234 aaPredicted RBP11.09□□□□□ -0.63
DHFR-206ENST00000513048 TCEANC2Q96MN5 208 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 AGXT2Q9BYV1 514 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 ARPP21Q9UBL0 812 aaPredicted RBP11.09□□□□□ -0.63
DHFR-206ENST00000513048 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.09□□□□□ -0.632e-8■■■□□ 17.8
DHFR-206ENST00000513048 FLT1P17948 1338 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 WDR19Q8NEZ3 1342 aa11.09□□□□□ -0.63
DHFR-206ENST00000513048 USP5P45974 858 aa11.08□□□□□ -0.64
DHFR-206ENST00000513048 CUL4AQ13619 759 aa11.08□□□□□ -0.64
DHFR-206ENST00000513048 CFAP100Q494V2 611 aa11.08□□□□□ -0.64
DHFR-206ENST00000513048 C12orf60Q5U649 245 aa11.08□□□□□ -0.64
DHFR-206ENST00000513048 ARHGAP27Q6ZUM4 889 aa11.08□□□□□ -0.64
DHFR-206ENST00000513048 CYB5R4Q7L1T6 521 aa11.08□□□□□ -0.64
DHFR-206ENST00000513048 MAPKAPK5Q8IW41 473 aa11.08□□□□□ -0.64
DHFR-206ENST00000513048 NCOA7Q8NI08 942 aa11.08□□□□□ -0.64
DHFR-206ENST00000513048 TMX3Q96JJ7 454 aa11.08□□□□□ -0.64
DHFR-206ENST00000513048 DDX4Q9NQI0 724 aaKnown RBP11.08□□□□□ -0.64
DHFR-206ENST00000513048 USP40Q9NVE5 1235 aa11.08□□□□□ -0.64
DHFR-206ENST00000513048 ZNF541Q9H0D2 1346 aa11.08□□□□□ -0.64
DHFR-206ENST00000513048 MINDY4BA8MYZ0 360 aa11.07□□□□□ -0.64
DHFR-206ENST00000513048 ORC4O43929 436 aa11.07□□□□□ -0.64
DHFR-206ENST00000513048 GABBR2O75899 941 aa11.07□□□□□ -0.64
DHFR-206ENST00000513048 LARGE1O95461 756 aa11.07□□□□□ -0.64
DHFR-206ENST00000513048 LMNB1P20700 586 aa11.07□□□□□ -0.64
DHFR-206ENST00000513048 DDIT3P35638 169 aa11.07□□□□□ -0.64
DHFR-206ENST00000513048 ZNF280AP59817 542 aaPredicted RBP11.07□□□□□ -0.64
DHFR-206ENST00000513048 ST3GAL1Q11201 340 aa11.07□□□□□ -0.64
DHFR-206ENST00000513048 TNIP1Q15025 636 aa11.07□□□□□ -0.64
DHFR-206ENST00000513048 MTMR14Q8NCE2 650 aa11.07□□□□□ -0.64
DHFR-206ENST00000513048 PRMT6Q96LA8 375 aaPredicted RBP11.07□□□□□ -0.64
DHFR-206ENST00000513048 IDI2Q9BXS1 227 aa11.07□□□□□ -0.64
DHFR-206ENST00000513048 MCM9Q9NXL9 1143 aa11.07□□□□□ -0.64
DHFR-206ENST00000513048 TPCN1Q9ULQ1 816 aa11.07□□□□□ -0.64
DHFR-206ENST00000513048 LIMCH1Q9UPQ0 1083 aa11.07□□□□□ -0.64
DHFR-206ENST00000513048 SIPA1L1O43166 1804 aa11.07□□□□□ -0.64
DHFR-206ENST00000513048 SHTN1A0MZ66 631 aa11.06□□□□□ -0.64
DHFR-206ENST00000513048 B4E1Z4 1266 aa11.06□□□□□ -0.64
DHFR-206ENST00000513048 PRC1O43663 620 aa11.06□□□□□ -0.64
DHFR-206ENST00000513048 PCP11498 1178 aaKnown RBP11.06□□□□□ -0.64
DHFR-206ENST00000513048 RPS12P25398 132 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms