RNA–Protein interactions for RNA: ENST00000511831.1

YIPF3-215, Transcript of Yip1 domain family member 3, humanhuman

TSL 4

Gene YIPF3, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-215ENST00000511831 USP40Q9NVE5 1235 aa12.95□□□□□ -0.34
YIPF3-215ENST00000511831 SUGT1Q9Y2Z0 365 aa12.95□□□□□ -0.34
YIPF3-215ENST00000511831 UNC80Q8N2C7 3258 aa12.95□□□□□ -0.34
YIPF3-215ENST00000511831 PHF20L1A8MW92 1017 aa12.94□□□□□ -0.34
YIPF3-215ENST00000511831 IFIT1P09914 478 aaKnown RBP12.94□□□□□ -0.34
YIPF3-215ENST00000511831 PTPRAP18433 802 aa12.94□□□□□ -0.34
YIPF3-215ENST00000511831 ZEB1P37275 1124 aaPredicted RBP12.94□□□□□ -0.34
YIPF3-215ENST00000511831 MNX1P50219 401 aaPredicted RBP12.94□□□□□ -0.34
YIPF3-215ENST00000511831 TRIM32Q13049 653 aa12.94□□□□□ -0.34
YIPF3-215ENST00000511831 RABL6Q3YEC7 729 aaPredicted RBP12.94□□□□□ -0.34
YIPF3-215ENST00000511831 SCYL3Q8IZE3 742 aa12.94□□□□□ -0.34
YIPF3-215ENST00000511831 ANKRD13CQ8N6S4 541 aa12.94□□□□□ -0.34
YIPF3-215ENST00000511831 CRISPLD2Q9H0B8 497 aa12.94□□□□□ -0.34
YIPF3-215ENST00000511831 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.94□□□□□ -0.34
YIPF3-215ENST00000511831 PICK1Q9NRD5 415 aa12.94□□□□□ -0.34
YIPF3-215ENST00000511831 TRIM75PA6NK02 468 aa12.93□□□□□ -0.34
YIPF3-215ENST00000511831 IRF5Q13568 498 aa12.93□□□□□ -0.34
YIPF3-215ENST00000511831 PUM3Q15397 648 aaKnown RBP12.93□□□□□ -0.34
YIPF3-215ENST00000511831 SH3BP5LQ7L8J4 393 aa12.93□□□□□ -0.34
YIPF3-215ENST00000511831 NECAB2Q7Z6G3 386 aa12.93□□□□□ -0.34
YIPF3-215ENST00000511831 PXYLP1Q8TE99 480 aa12.93□□□□□ -0.34
YIPF3-215ENST00000511831 SMCR8Q8TEV9 937 aaPredicted RBP12.93□□□□□ -0.34
YIPF3-215ENST00000511831 AFG3L2Q9Y4W6 797 aa12.93□□□□□ -0.34
YIPF3-215ENST00000511831 DOCK2Q92608 1830 aa12.92□□□□□ -0.34
YIPF3-215ENST00000511831 UTYO14607 1347 aa12.92□□□□□ -0.34
YIPF3-215ENST00000511831 MYH13Q9UKX3 1938 aa12.92□□□□□ -0.34
YIPF3-215ENST00000511831 MAGEA10P43363 369 aaPredicted RBP12.92□□□□□ -0.34
YIPF3-215ENST00000511831 RGS3P49796 1198 aa12.92□□□□□ -0.34
YIPF3-215ENST00000511831 TREML2Q5T2D2 321 aa12.92□□□□□ -0.34
YIPF3-215ENST00000511831 FASTKD5Q7L8L6 764 aaKnown RBP12.92□□□□□ -0.34
YIPF3-215ENST00000511831 WDR66Q8TBY9 1149 aa12.92□□□□□ -0.34
YIPF3-215ENST00000511831 LDHBP07195 334 aaKnown RBP12.91□□□□□ -0.34
YIPF3-215ENST00000511831 SLC5A1P13866 664 aa12.91□□□□□ -0.34
YIPF3-215ENST00000511831 BMP8BP34820 402 aa12.91□□□□□ -0.34
YIPF3-215ENST00000511831 ZSCAN29Q8IWY8 852 aaPredicted RBP12.91□□□□□ -0.34
YIPF3-215ENST00000511831 COA7Q96BR5 231 aa12.91□□□□□ -0.34
YIPF3-215ENST00000511831 MTMR10Q9NXD2 777 aa12.91□□□□□ -0.34
YIPF3-215ENST00000511831 DOCK3Q8IZD9 2030 aa12.91□□□□□ -0.34
YIPF3-215ENST00000511831 KIF16BQ96L93 1317 aa12.9□□□□□ -0.34
YIPF3-215ENST00000511831 PTPRFP10586 1907 aa12.9□□□□□ -0.34
YIPF3-215ENST00000511831 DDTLA6NHG4 134 aaPredicted RBP12.9□□□□□ -0.34
YIPF3-215ENST00000511831 FAM196BA6NMK8 535 aa12.9□□□□□ -0.34
YIPF3-215ENST00000511831 PICALMQ13492 652 aa12.9□□□□□ -0.34
YIPF3-215ENST00000511831 WDR63Q8IWG1 891 aa12.9□□□□□ -0.34
YIPF3-215ENST00000511831 COL25A1Q9BXS0 654 aaPredicted RBP12.9□□□□□ -0.34
YIPF3-215ENST00000511831 DDX4Q9NQI0 724 aaKnown RBP12.9□□□□□ -0.34
YIPF3-215ENST00000511831 AGTPBP1Q9UPW5 1226 aa12.9□□□□□ -0.34
YIPF3-215ENST00000511831 STXBP5LQ9Y2K9 1186 aa12.9□□□□□ -0.34
YIPF3-215ENST00000511831 LRRFIP2Q9Y608 721 aaKnown RBP12.9□□□□□ -0.34
YIPF3-215ENST00000511831 RFX7Q2KHR2 1363 aa12.9□□□□□ -0.34
YIPF3-215ENST00000511831 DDX60LQ5H9U9 1706 aaKnown RBP12.9□□□□□ -0.34
YIPF3-215ENST00000511831 PHIPQ8WWQ0 1821 aa12.9□□□□□ -0.34
YIPF3-215ENST00000511831 DOCK1Q14185 1865 aa12.89□□□□□ -0.35
YIPF3-215ENST00000511831 RFX5P48382 616 aaPredicted RBP12.89□□□□□ -0.35
YIPF3-215ENST00000511831 LPIN2Q92539 896 aa12.89□□□□□ -0.35
YIPF3-215ENST00000511831 C11orf49Q9H6J7 331 aa12.89□□□□□ -0.35
YIPF3-215ENST00000511831 SLC45A1Q9Y2W3 748 aa12.89□□□□□ -0.35
YIPF3-215ENST00000511831 EYA2O00167 538 aa12.88□□□□□ -0.35
YIPF3-215ENST00000511831 PEX10O60683 326 aa12.88□□□□□ -0.35
YIPF3-215ENST00000511831 HMGCRP04035 888 aa12.88□□□□□ -0.35
YIPF3-215ENST00000511831 PHKA1P46020 1223 aa12.88□□□□□ -0.35
YIPF3-215ENST00000511831 LRIT3Q3SXY7 679 aa12.88□□□□□ -0.35
YIPF3-215ENST00000511831 ATG9AQ7Z3C6 839 aa12.88□□□□□ -0.35
YIPF3-215ENST00000511831 TDHQ8IZJ6 230 aa12.88□□□□□ -0.35
YIPF3-215ENST00000511831 UBE2OQ9C0C9 1292 aaKnown RBP12.88□□□□□ -0.35
YIPF3-215ENST00000511831 NBPF3Q9H094 633 aa12.88□□□□□ -0.35
YIPF3-215ENST00000511831 SIL1Q9H173 461 aa12.88□□□□□ -0.35
YIPF3-215ENST00000511831 PFASO15067 1338 aa12.88□□□□□ -0.35
YIPF3-215ENST00000511831 ENTPD3O75355 529 aa12.87□□□□□ -0.35
YIPF3-215ENST00000511831 ATP2B3Q16720 1220 aa12.87□□□□□ -0.35
YIPF3-215ENST00000511831 FAM110CQ1W6H9 321 aa12.87□□□□□ -0.35
YIPF3-215ENST00000511831 GPR153Q6NV75 609 aa12.87□□□□□ -0.35
YIPF3-215ENST00000511831 ANKLE1Q8NAG6 615 aa12.87□□□□□ -0.35
YIPF3-215ENST00000511831 TRIB2Q92519 343 aa12.87□□□□□ -0.35
YIPF3-215ENST00000511831 IDI2Q9BXS1 227 aa12.87□□□□□ -0.35
YIPF3-215ENST00000511831 HMX1Q9NP08 348 aaPredicted RBP12.87□□□□□ -0.35
YIPF3-215ENST00000511831 CTNND1O60716 968 aaKnown RBP12.86□□□□□ -0.35
YIPF3-215ENST00000511831 ADORA1P30542 326 aa12.86□□□□□ -0.35
YIPF3-215ENST00000511831 HMGCS2P54868 508 aa12.86□□□□□ -0.35
YIPF3-215ENST00000511831 MDM2Q00987 491 aaPredicted RBP12.86□□□□□ -0.35
YIPF3-215ENST00000511831 FAM161BQ96MY7 647 aa12.86□□□□□ -0.35
YIPF3-215ENST00000511831 USP44Q9H0E7 712 aa12.86□□□□□ -0.35
YIPF3-215ENST00000511831 GJD2Q9UKL4 321 aa12.86□□□□□ -0.35
YIPF3-215ENST00000511831 PNMA3Q9UL41 463 aa12.86□□□□□ -0.35
YIPF3-215ENST00000511831 VCANP13611 3396 aa12.86□□□□□ -0.35
YIPF3-215ENST00000511831 GAKO14976 1311 aa12.86□□□□□ -0.35
YIPF3-215ENST00000511831 RPTORQ8N122 1335 aa12.86□□□□□ -0.35
YIPF3-215ENST00000511831 CAPN2P17655 700 aa12.85□□□□□ -0.35
YIPF3-215ENST00000511831 CYP2B6P20813 491 aa12.85□□□□□ -0.35
YIPF3-215ENST00000511831 BTDP43251 543 aa12.85□□□□□ -0.35
YIPF3-215ENST00000511831 MAP3K10Q02779 954 aa12.85□□□□□ -0.35
YIPF3-215ENST00000511831 SPP2Q13103 211 aa12.85□□□□□ -0.35
YIPF3-215ENST00000511831 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
YIPF3-215ENST00000511831 DZIP1Q86YF9 867 aaKnown RBP12.85□□□□□ -0.35
YIPF3-215ENST00000511831 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.85□□□□□ -0.35
YIPF3-215ENST00000511831 MRPL50Q8N5N7 158 aaKnown RBP12.85□□□□□ -0.35
YIPF3-215ENST00000511831 MRS2Q9HD23 443 aa12.85□□□□□ -0.35
YIPF3-215ENST00000511831 OGDHLQ9ULD0 1010 aa12.85□□□□□ -0.35
YIPF3-215ENST00000511831 MYH2Q9UKX2 1941 aa12.85□□□□□ -0.35
YIPF3-215ENST00000511831 LAMA2P24043 3122 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms