RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 ZKSCAN4Q969J2 545 aaPredicted RBP20.54■□□□□ 0.88
SMN2-210ENST00000511812 AATFQ9NY61 560 aaKnown RBP eCLIP20.54■□□□□ 0.88
SMN2-210ENST00000511812 NPM3O75607 178 aaKnown RBP20.53■□□□□ 0.88
SMN2-210ENST00000511812 CYP7A1P22680 504 aa20.53■□□□□ 0.88
SMN2-210ENST00000511812 GJA5P36382 358 aa20.53■□□□□ 0.88
SMN2-210ENST00000511812 ERO1BQ86YB8 467 aa20.53■□□□□ 0.88
SMN2-210ENST00000511812 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.53■□□□□ 0.88
SMN2-210ENST00000511812 OTUD5Q96G74 571 aa20.53■□□□□ 0.88
SMN2-210ENST00000511812 DDX4Q9NQI0 724 aaKnown RBP20.53■□□□□ 0.88
SMN2-210ENST00000511812 NDUFB9Q9Y6M9 179 aa20.53■□□□□ 0.88
SMN2-210ENST00000511812 RFX7Q2KHR2 1363 aa20.53■□□□□ 0.88
SMN2-210ENST00000511812 SPDYE5A6NIY4 337 aa20.52■□□□□ 0.88
SMN2-210ENST00000511812 GTF2A2P52657 109 aa20.52■□□□□ 0.88
SMN2-210ENST00000511812 IFNL1Q8IU54 200 aa20.52■□□□□ 0.88
SMN2-210ENST00000511812 DNAJC2Q99543 621 aaKnown RBP20.52■□□□□ 0.88
SMN2-210ENST00000511812 SNCAIPQ9Y6H5 919 aa20.52■□□□□ 0.88
SMN2-210ENST00000511812 DDTLA6NHG4 134 aaPredicted RBP20.51■□□□□ 0.87
SMN2-210ENST00000511812 TBC1D8O95759 1140 aa20.51■□□□□ 0.87
SMN2-210ENST00000511812 INPP5BP32019 993 aa20.51■□□□□ 0.87
SMN2-210ENST00000511812 PPP4CP60510 307 aa20.51■□□□□ 0.87
SMN2-210ENST00000511812 TMED8Q6PL24 325 aaPredicted RBP20.51■□□□□ 0.87
SMN2-210ENST00000511812 MAGEB6Q8N7X4 407 aa20.51■□□□□ 0.87
SMN2-210ENST00000511812 SH3RF3Q8TEJ3 882 aaPredicted RBP20.51■□□□□ 0.87
SMN2-210ENST00000511812 CNKSR2Q8WXI2 1034 aa20.51■□□□□ 0.87
SMN2-210ENST00000511812 ANTXR1Q9H6X2 564 aa20.51■□□□□ 0.87
SMN2-210ENST00000511812 DCTPP1Q9H773 170 aa20.51■□□□□ 0.87
SMN2-210ENST00000511812 OTOFQ9HC10 1997 aa20.51■□□□□ 0.87
SMN2-210ENST00000511812 MAST2Q6P0Q8 1798 aa20.5■□□□□ 0.87
SMN2-210ENST00000511812 SH3BP5LQ7L8J4 393 aa20.5■□□□□ 0.87
SMN2-210ENST00000511812 CERS3Q8IU89 383 aa20.5■□□□□ 0.87
SMN2-210ENST00000511812 CRBNQ96SW2 442 aa20.5■□□□□ 0.87
SMN2-210ENST00000511812 OSBPL5Q9H0X9 879 aaPredicted RBP20.5■□□□□ 0.87
SMN2-210ENST00000511812 ZNF112Q9UJU3 913 aa20.5■□□□□ 0.87
SMN2-210ENST00000511812 CASP8AP2Q9UKL3 1982 aa20.49■□□□□ 0.87
SMN2-210ENST00000511812 CCL15-CCL14A0A0B4J2E2 113 aa20.49■□□□□ 0.87
SMN2-210ENST00000511812 SMARCA5O60264 1052 aaPredicted RBP20.49■□□□□ 0.87
SMN2-210ENST00000511812 PPATQ06203 517 aa20.49■□□□□ 0.87
SMN2-210ENST00000511812 CCL15Q16663 113 aa20.49■□□□□ 0.87
SMN2-210ENST00000511812 ADGRA1Q86SQ6 560 aa20.49■□□□□ 0.87
SMN2-210ENST00000511812 TESPA1A2RU30 521 aaPredicted RBP20.48■□□□□ 0.87
SMN2-210ENST00000511812 GOLIM4O00461 696 aa20.48■□□□□ 0.87
SMN2-210ENST00000511812 PPIL2Q13356 520 aa20.48■□□□□ 0.87
SMN2-210ENST00000511812 TGFBRAP1Q8WUH2 860 aa20.48■□□□□ 0.87
SMN2-210ENST00000511812 BOLA2Q9H3K6 86 aa20.48■□□□□ 0.87
SMN2-210ENST00000511812 PCDHB15Q9Y5E8 787 aa20.48■□□□□ 0.87
SMN2-210ENST00000511812 ATRNL1Q5VV63 1379 aa20.47■□□□□ 0.87
SMN2-210ENST00000511812 IGF2BP3O00425 579 aaKnown RBP eCLIP20.47■□□□□ 0.87
SMN2-210ENST00000511812 CAPN15O75808 1086 aa20.47■□□□□ 0.87
SMN2-210ENST00000511812 CETPP11597 493 aa20.47■□□□□ 0.87
SMN2-210ENST00000511812 ATP5JP18859 108 aa20.47■□□□□ 0.87
SMN2-210ENST00000511812 SNAPC2Q13487 334 aa20.47■□□□□ 0.87
SMN2-210ENST00000511812 NOL9Q5SY16 702 aaKnown RBP20.47■□□□□ 0.87
SMN2-210ENST00000511812 MIGA1Q8NAN2 632 aa20.47■□□□□ 0.87
SMN2-210ENST00000511812 GPATCH3Q96I76 525 aa20.47■□□□□ 0.87
SMN2-210ENST00000511812 MS4A4AQ96JQ5 239 aa20.47■□□□□ 0.87
SMN2-210ENST00000511812 CFHR5Q9BXR6 569 aa20.47■□□□□ 0.87
SMN2-210ENST00000511812 DHX36Q9H2U1 1008 aaKnown RBP20.47■□□□□ 0.87
SMN2-210ENST00000511812 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.47■□□□□ 0.87
SMN2-210ENST00000511812 PICK1Q9NRD5 415 aa20.47■□□□□ 0.87
SMN2-210ENST00000511812 GPR25O00155 361 aa20.46■□□□□ 0.87
SMN2-210ENST00000511812 IRF6O14896 467 aa20.46■□□□□ 0.87
SMN2-210ENST00000511812 TBC1D12O60347 775 aa20.46■□□□□ 0.87
SMN2-210ENST00000511812 DYNLL1P63167 89 aaKnown RBP20.46■□□□□ 0.87
SMN2-210ENST00000511812 MAP3K10Q02779 954 aa20.46■□□□□ 0.87
SMN2-210ENST00000511812 DGKZQ13574 1117 aa20.46■□□□□ 0.87
SMN2-210ENST00000511812 SLC9C2Q5TAH2 1124 aa20.46■□□□□ 0.87
SMN2-210ENST00000511812 MAPKAPK5Q8IW41 473 aa20.46■□□□□ 0.87
SMN2-210ENST00000511812 SCYL3Q8IZE3 742 aa20.46■□□□□ 0.87
SMN2-210ENST00000511812 PAG1Q9NWQ8 432 aa20.46■□□□□ 0.87
SMN2-210ENST00000511812 ZBTB47Q9UFB7 747 aaPredicted RBP20.46■□□□□ 0.87
SMN2-210ENST00000511812 DOCK2Q92608 1830 aa20.46■□□□□ 0.87
SMN2-210ENST00000511812 COL2A1P02458 1487 aaPredicted RBP20.45■□□□□ 0.86
SMN2-210ENST00000511812 USP5P45974 858 aa20.45■□□□□ 0.86
SMN2-210ENST00000511812 NOM1Q5C9Z4 860 aaKnown RBP20.45■□□□□ 0.86
SMN2-210ENST00000511812 ZNF296Q8WUU4 475 aaPredicted RBP20.45■□□□□ 0.86
SMN2-210ENST00000511812 BRI3BPQ8WY22 251 aa20.45■□□□□ 0.86
SMN2-210ENST00000511812 TRIM34Q9BYJ4 488 aa20.45■□□□□ 0.86
SMN2-210ENST00000511812 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.45■□□□□ 0.86
SMN2-210ENST00000511812 PI4KBQ9UBF8 816 aa20.45■□□□□ 0.86
SMN2-210ENST00000511812 FLT1P17948 1338 aa20.45■□□□□ 0.86
SMN2-210ENST00000511812 MYO5AQ9Y4I1 1855 aaKnown RBP20.44■□□□□ 0.86
SMN2-210ENST00000511812 PHF20L1A8MW92 1017 aa20.44■□□□□ 0.86
SMN2-210ENST00000511812 CTNND1O60716 968 aaKnown RBP20.44■□□□□ 0.86
SMN2-210ENST00000511812 FKTNO75072 461 aa20.44■□□□□ 0.86
SMN2-210ENST00000511812 HAUS7Q99871 368 aa20.44■□□□□ 0.86
SMN2-210ENST00000511812 PTPN18Q99952 460 aa20.44■□□□□ 0.86
SMN2-210ENST00000511812 ECHDC1Q9NTX5 307 aa20.44■□□□□ 0.86
SMN2-210ENST00000511812 HERC5Q9UII4 1024 aaKnown RBP20.44■□□□□ 0.86
SMN2-210ENST00000511812 MAGEB6P1A0A0J9YX57 407 aa20.43■□□□□ 0.86
SMN2-210ENST00000511812 HLA-DOAP06340 250 aa20.43■□□□□ 0.86
SMN2-210ENST00000511812 PDE6AP16499 860 aa20.43■□□□□ 0.86
SMN2-210ENST00000511812 AAMPQ13685 434 aa20.43■□□□□ 0.86
SMN2-210ENST00000511812 CRACR2BQ8N4Y2 399 aaPredicted RBP20.43■□□□□ 0.86
SMN2-210ENST00000511812 MCOLN1Q9GZU1 580 aa20.43■□□□□ 0.86
SMN2-210ENST00000511812 ZFYVE28Q9HCC9 887 aa20.43■□□□□ 0.86
SMN2-210ENST00000511812 FAM196BA6NMK8 535 aa20.42■□□□□ 0.86
SMN2-210ENST00000511812 SLURP2P0DP57 97 aa20.42■□□□□ 0.86
SMN2-210ENST00000511812 CRHR2Q13324 411 aa20.42■□□□□ 0.86
SMN2-210ENST00000511812 TAF1CQ15572 869 aaPredicted RBP20.42■□□□□ 0.86
SMN2-210ENST00000511812 CTU1Q7Z7A3 348 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms