RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 ZNF211Q13398 564 aaPredicted RBP6.32□□□□□ -1.4
SCAMP1-204ENST00000511551 ZSWIM9Q86XI8 627 aa6.32□□□□□ -1.4
SCAMP1-204ENST00000511551 BRPF3Q9ULD4 1205 aa6.32□□□□□ -1.4
SCAMP1-204ENST00000511551 LRRC10BA6NIK2 292 aa6.31□□□□□ -1.4
SCAMP1-204ENST00000511551 RNGTTO60942 597 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-204ENST00000511551 HNRNPUQ00839 825 aaKnown RBP eCLIP6.31□□□□□ -1.4
SCAMP1-204ENST00000511551 PDZD3Q86UT5 571 aa6.31□□□□□ -1.4
SCAMP1-204ENST00000511551 HEXIM2Q96MH2 286 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-204ENST00000511551 FAM129BQ96TA1 746 aa6.31□□□□□ -1.4
SCAMP1-204ENST00000511551 ZC3H12CQ9C0D7 883 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-204ENST00000511551 NEFMP07197 916 aa6.3□□□□□ -1.4
SCAMP1-204ENST00000511551 HCLS1P14317 486 aaPredicted RBP6.3□□□□□ -1.4
SCAMP1-204ENST00000511551 PDE3BQ13370 1112 aa6.3□□□□□ -1.4
SCAMP1-204ENST00000511551 ORC1Q13415 861 aa6.3□□□□□ -1.4
SCAMP1-204ENST00000511551 ARHGAP27Q6ZUM4 889 aa6.3□□□□□ -1.4
SCAMP1-204ENST00000511551 CCDC74AQ96AQ1 378 aa6.3□□□□□ -1.4
SCAMP1-204ENST00000511551 DNAJC25Q9H1X3 360 aa6.3□□□□□ -1.4
SCAMP1-204ENST00000511551 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.29□□□□□ -1.4
SCAMP1-204ENST00000511551 IGF2BP3O00425 579 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCAMP1-204ENST00000511551 ZNF157P51786 506 aaPredicted RBP6.29□□□□□ -1.4
SCAMP1-204ENST00000511551 ZC3H12AQ5D1E8 599 aaKnown RBP6.29□□□□□ -1.4
SCAMP1-204ENST00000511551 RNF214Q8ND24 703 aa6.29□□□□□ -1.4
SCAMP1-204ENST00000511551 ASB11Q8WXH4 323 aa6.29□□□□□ -1.4
SCAMP1-204ENST00000511551 ISL2Q96A47 359 aa6.29□□□□□ -1.4
SCAMP1-204ENST00000511551 CITED4Q96RK1 184 aa6.29□□□□□ -1.4
SCAMP1-204ENST00000511551 TRAK1Q9UPV9 953 aa6.29□□□□□ -1.4
SCAMP1-204ENST00000511551 TSPAN15O95858 294 aa6.28□□□□□ -1.4
SCAMP1-204ENST00000511551 IGHA2P01877 340 aa6.28□□□□□ -1.4
SCAMP1-204ENST00000511551 CFPP27918 469 aa6.28□□□□□ -1.4
SCAMP1-204ENST00000511551 RAP1GAPP47736 663 aa6.28□□□□□ -1.4
SCAMP1-204ENST00000511551 ERVK-24P63145 666 aa6.28□□□□□ -1.4
SCAMP1-204ENST00000511551 ARHGAP4P98171 946 aa6.28□□□□□ -1.4
SCAMP1-204ENST00000511551 KCNMB1Q16558 191 aa6.28□□□□□ -1.4
SCAMP1-204ENST00000511551 MLANAQ16655 118 aa6.28□□□□□ -1.4
SCAMP1-204ENST00000511551 C1QL4Q86Z23 238 aa6.28□□□□□ -1.4
SCAMP1-204ENST00000511551 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.28□□□□□ -1.4
SCAMP1-204ENST00000511551 TOP6BLQ8N6T0 577 aa6.28□□□□□ -1.4
SCAMP1-204ENST00000511551 TOX2Q96NM4 488 aa6.28□□□□□ -1.4
SCAMP1-204ENST00000511551 PRDM7Q9NQW5 492 aa6.28□□□□□ -1.4
SCAMP1-204ENST00000511551 TMEM39AQ9NV64 488 aa6.28□□□□□ -1.4
SCAMP1-204ENST00000511551 CTNND2Q9UQB3 1225 aa6.28□□□□□ -1.4
SCAMP1-204ENST00000511551 PPP2R3AQ06190 1150 aa6.27□□□□□ -1.41
SCAMP1-204ENST00000511551 GRM2Q14416 872 aa6.27□□□□□ -1.41
SCAMP1-204ENST00000511551 SIAH1Q8IUQ4 282 aa6.27□□□□□ -1.41
SCAMP1-204ENST00000511551 SPACA3Q8IXA5 215 aa6.27□□□□□ -1.41
SCAMP1-204ENST00000511551 CCER1Q8TC90 406 aaPredicted RBP6.27□□□□□ -1.41
SCAMP1-204ENST00000511551 GTF2IRD1Q9UHL9 959 aa6.27□□□□□ -1.41
SCAMP1-204ENST00000511551 EIF1AYO14602 144 aaKnown RBP6.26□□□□□ -1.41
SCAMP1-204ENST00000511551 NDUFB5O43674 189 aa6.26□□□□□ -1.41
SCAMP1-204ENST00000511551 GADD45BO75293 160 aaPredicted RBP6.26□□□□□ -1.41
SCAMP1-204ENST00000511551 ITIH2P19823 946 aa6.26□□□□□ -1.41
SCAMP1-204ENST00000511551 ZP2Q05996 745 aa6.26□□□□□ -1.41
SCAMP1-204ENST00000511551 PPP1R16BQ96T49 567 aa6.26□□□□□ -1.41
SCAMP1-204ENST00000511551 KRTAP4-5Q9BYR2 181 aa6.26□□□□□ -1.41
SCAMP1-204ENST00000511551 SSU72Q9NP77 194 aaKnown RBP6.26□□□□□ -1.41
SCAMP1-204ENST00000511551 CACNA2D2Q9NY47 1150 aa6.26□□□□□ -1.41
SCAMP1-204ENST00000511551 LMCD1Q9NZU5 365 aa6.26□□□□□ -1.41
SCAMP1-204ENST00000511551 ARNTP27540 789 aa6.25□□□□□ -1.41
SCAMP1-204ENST00000511551 AFMP43652 599 aa6.25□□□□□ -1.41
SCAMP1-204ENST00000511551 IKZF1Q13422 519 aa6.25□□□□□ -1.41
SCAMP1-204ENST00000511551 NKPD1Q17RQ9 610 aa6.25□□□□□ -1.41
SCAMP1-204ENST00000511551 KCNB2Q92953 911 aa6.25□□□□□ -1.41
SCAMP1-204ENST00000511551 LIN37Q96GY3 246 aaPredicted RBP6.25□□□□□ -1.41
SCAMP1-204ENST00000511551 CARNS1A5YM72 827 aa6.24□□□□□ -1.41
SCAMP1-204ENST00000511551 ZNF865P0CJ78 1059 aaPredicted RBP6.24□□□□□ -1.41
SCAMP1-204ENST00000511551 LCE5AQ5TCM9 118 aa6.24□□□□□ -1.41
SCAMP1-204ENST00000511551 FYB2Q5VWT5 728 aa6.24□□□□□ -1.41
SCAMP1-204ENST00000511551 DTHD1Q6ZMT9 781 aa6.24□□□□□ -1.41
SCAMP1-204ENST00000511551 LCNL1Q6ZST4 164 aa6.24□□□□□ -1.41
SCAMP1-204ENST00000511551 GLYCTKQ8IVS8 523 aa6.24□□□□□ -1.41
SCAMP1-204ENST00000511551 ZSCAN18Q8TBC5 510 aaPredicted RBP6.24□□□□□ -1.41
SCAMP1-204ENST00000511551 STK35Q8TDR2 534 aa6.24□□□□□ -1.41
SCAMP1-204ENST00000511551 PRDM10Q9NQV6 1147 aa6.24□□□□□ -1.41
SCAMP1-204ENST00000511551 PITPNM2Q9BZ72 1349 aa6.24□□□□□ -1.41
SCAMP1-204ENST00000511551 H3BRB1 525 aa6.23□□□□□ -1.41
SCAMP1-204ENST00000511551 GPR182O15218 404 aa6.23□□□□□ -1.41
SCAMP1-204ENST00000511551 GLI1P08151 1106 aa6.23□□□□□ -1.41
SCAMP1-204ENST00000511551 XRCC5P13010 732 aaKnown RBP6.23□□□□□ -1.41
SCAMP1-204ENST00000511551 NTF4P34130 210 aa6.23□□□□□ -1.41
SCAMP1-204ENST00000511551 CLCN7P51798 805 aa6.23□□□□□ -1.41
SCAMP1-204ENST00000511551 RING1Q06587 406 aa6.23□□□□□ -1.41
SCAMP1-204ENST00000511551 ZNF252P-AS1Q0IIN9 211 aa6.23□□□□□ -1.41
SCAMP1-204ENST00000511551 SULF2Q8IWU5 870 aa6.23□□□□□ -1.41
SCAMP1-204ENST00000511551 LRRC56Q8IYG6 542 aaPredicted RBP6.23□□□□□ -1.41
SCAMP1-204ENST00000511551 EPS8L3Q8TE67 593 aaKnown RBP6.23□□□□□ -1.41
SCAMP1-204ENST00000511551 CSRNP1Q96S65 589 aa6.23□□□□□ -1.41
SCAMP1-204ENST00000511551 NIF3L1Q9GZT8 377 aa6.23□□□□□ -1.41
SCAMP1-204ENST00000511551 TUT1Q9H6E5 874 aaKnown RBP6.23□□□□□ -1.41
SCAMP1-204ENST00000511551 PPP4R2Q9NY27 417 aa6.23□□□□□ -1.41
SCAMP1-204ENST00000511551 ARID3CA6NKF2 412 aa6.22□□□□□ -1.41
SCAMP1-204ENST00000511551 KRT1P04264 644 aa6.22□□□□□ -1.41
SCAMP1-204ENST00000511551 LILRA6Q6PI73 481 aa6.22□□□□□ -1.41
SCAMP1-204ENST00000511551 SYDE1Q6ZW31 735 aaPredicted RBP6.22□□□□□ -1.41
SCAMP1-204ENST00000511551 ANKLE2Q86XL3 938 aa6.22□□□□□ -1.41
SCAMP1-204ENST00000511551 EMILIN2Q9BXX0 1053 aa6.22□□□□□ -1.41
SCAMP1-204ENST00000511551 GPN3Q9UHW5 284 aaPredicted RBP6.22□□□□□ -1.41
SCAMP1-204ENST00000511551 EOMESO95936 686 aa6.21□□□□□ -1.42
SCAMP1-204ENST00000511551 NME2P22392 152 aa6.21□□□□□ -1.42
SCAMP1-204ENST00000511551 FCGRTP55899 365 aa6.21□□□□□ -1.42
SCAMP1-204ENST00000511551 MAP1SQ66K74 1059 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms