RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 AEBP2Q6ZN18 517 aaPredicted RBP24.84■■□□□ 1.57
SCAMP1-204ENST00000511551 CHIC1Q5VXU3 224 aa23.49■■□□□ 1.35
SCAMP1-204ENST00000511551 SENP3Q9H4L4 574 aaPredicted RBP21.2■□□□□ 0.98
SCAMP1-204ENST00000511551 PHF23Q9BUL5 403 aaPredicted RBP20.92■□□□□ 0.94
SCAMP1-204ENST00000511551 FOXD1Q16676 465 aa19.77■□□□□ 0.76
SCAMP1-204ENST00000511551 PLPPR3Q6T4P5 718 aa18.71■□□□□ 0.59
SCAMP1-204ENST00000511551 MSH5O43196 834 aa18.55■□□□□ 0.56
SCAMP1-204ENST00000511551 PPP6R1Q9UPN7 881 aa18.41■□□□□ 0.54
SCAMP1-204ENST00000511551 PIAS4Q8N2W9 510 aaPredicted RBP18.4■□□□□ 0.54
SCAMP1-204ENST00000511551 ADRA2BP18089 450 aa18.31■□□□□ 0.52
SCAMP1-204ENST00000511551 POTEDQ86YR6 584 aa18.29■□□□□ 0.52
SCAMP1-204ENST00000511551 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
SCAMP1-204ENST00000511551 DMRT2Q9Y5R5 561 aa16.81■□□□□ 0.28
SCAMP1-204ENST00000511551 SCAF1Q9H7N4 1312 aaKnown RBP16.79■□□□□ 0.28
SCAMP1-204ENST00000511551 PPP4R3CPQ6ZMV5 832 aa16.37■□□□□ 0.21
SCAMP1-204ENST00000511551 HOXD11P31277 338 aaPredicted RBP16.17■□□□□ 0.18
SCAMP1-204ENST00000511551 CNKSR2Q8WXI2 1034 aa16.11■□□□□ 0.17
SCAMP1-204ENST00000511551 DCAF8L1A6NGE4 600 aa16.02■□□□□ 0.16
SCAMP1-204ENST00000511551 RNF216Q9NWF9 866 aaPredicted RBP16.01■□□□□ 0.15
SCAMP1-204ENST00000511551 CACNB1Q02641 598 aaPredicted RBP15.95■□□□□ 0.14
SCAMP1-204ENST00000511551 RNF39Q9H2S5 420 aa15.84■□□□□ 0.13
SCAMP1-204ENST00000511551 NCBP3Q53F19 620 aaKnown RBP15.71■□□□□ 0.11
SCAMP1-204ENST00000511551 DNAJC5BQ9UF47 199 aa15.7■□□□□ 0.1
SCAMP1-204ENST00000511551 C1QBPQ07021 282 aaKnown RBP15.6■□□□□ 0.09
SCAMP1-204ENST00000511551 NPM3O75607 178 aaKnown RBP15.48■□□□□ 0.07
SCAMP1-204ENST00000511551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.054e-6■■■■□ 19.8
SCAMP1-204ENST00000511551 KCNA4P22459 653 aa15.07■□□□□ 0
SCAMP1-204ENST00000511551 U3KPZ7 1027 aaPredicted RBP15.03■□□□□ -0
SCAMP1-204ENST00000511551 SLC4A2P04920 1241 aa14.84□□□□□ -0.03
SCAMP1-204ENST00000511551 SPINK5Q9NQ38 1064 aaPredicted RBP14.82□□□□□ -0.04
SCAMP1-204ENST00000511551 CAPN15O75808 1086 aa14.78□□□□□ -0.04
SCAMP1-204ENST00000511551 DSG3P32926 999 aa14.78□□□□□ -0.04
SCAMP1-204ENST00000511551 APLP2Q06481 763 aa14.6□□□□□ -0.07
SCAMP1-204ENST00000511551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.58□□□□□ -0.08
SCAMP1-204ENST00000511551 HNRNPUL2Q1KMD3 747 aaKnown RBP14.58□□□□□ -0.08
SCAMP1-204ENST00000511551 ZNF219Q9P2Y4 722 aaPredicted RBP14.53□□□□□ -0.08
SCAMP1-204ENST00000511551 TRHP20396 242 aaPredicted RBP14.51□□□□□ -0.09
SCAMP1-204ENST00000511551 SAMD1Q6SPF0 538 aaPredicted RBP14.48□□□□□ -0.09
SCAMP1-204ENST00000511551 ABCB7O75027 752 aa14.42□□□□□ -0.1
SCAMP1-204ENST00000511551 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
SCAMP1-204ENST00000511551 POTEHQ6S545 545 aa14.3□□□□□ -0.12
SCAMP1-204ENST00000511551 SLC4A1APQ9BWU0 796 aaKnown RBP14.2□□□□□ -0.14
SCAMP1-204ENST00000511551 POLA2Q14181 598 aa14.14□□□□□ -0.15
SCAMP1-204ENST00000511551 FOXD4L1Q9NU39 408 aa14.11□□□□□ -0.15
SCAMP1-204ENST00000511551 RBM42Q9BTD8 480 aaKnown RBP14.09□□□□□ -0.15
SCAMP1-204ENST00000511551 ATF5Q9Y2D1 282 aaPredicted RBP14□□□□□ -0.17
SCAMP1-204ENST00000511551 ZBTB22O15209 634 aa13.87□□□□□ -0.19
SCAMP1-204ENST00000511551 ZBTB12Q9Y330 459 aaPredicted RBP13.85□□□□□ -0.19
SCAMP1-204ENST00000511551 CHRDL2Q6WN34 429 aa13.82□□□□□ -0.2
SCAMP1-204ENST00000511551 AKT1S1Q96B36 256 aa13.76□□□□□ -0.21
SCAMP1-204ENST00000511551 ATXN8OSP0DMR3 200 aa13.74□□□□□ -0.21
SCAMP1-204ENST00000511551 OSCARQ8IYS5 282 aa13.66□□□□□ -0.22
SCAMP1-204ENST00000511551 REM2Q8IYK8 340 aaPredicted RBP13.62□□□□□ -0.23
SCAMP1-204ENST00000511551 PIP4P2Q8N4L2 257 aa13.48□□□□□ -0.25
SCAMP1-204ENST00000511551 PITPNM1O00562 1244 aa13.46□□□□□ -0.25
SCAMP1-204ENST00000511551 FBLN2P98095 1184 aa13.44□□□□□ -0.26
SCAMP1-204ENST00000511551 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
SCAMP1-204ENST00000511551 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
SCAMP1-204ENST00000511551 SPDYE2Q495Y8 402 aa13.42□□□□□ -0.26
SCAMP1-204ENST00000511551 FXR2P51116 673 aaKnown RBP eCLIP13.41□□□□□ -0.26
SCAMP1-204ENST00000511551 MKRN4PQ13434 485 aaPredicted RBP13.36□□□□□ -0.27
SCAMP1-204ENST00000511551 SP7Q8TDD2 431 aaPredicted RBP13.36□□□□□ -0.27
SCAMP1-204ENST00000511551 SSUH2Q9Y2M2 353 aa13.25□□□□□ -0.29
SCAMP1-204ENST00000511551 HAX1O00165 279 aa13.24□□□□□ -0.29
SCAMP1-204ENST00000511551 ZNF692Q9BU19 519 aaPredicted RBP13.23□□□□□ -0.29
SCAMP1-204ENST00000511551 SPDYE1Q8NFV5 336 aaPredicted RBP13.2□□□□□ -0.3
SCAMP1-204ENST00000511551 CSRNP3Q8WYN3 585 aa13.14□□□□□ -0.31
SCAMP1-204ENST00000511551 CLEC11AQ9Y240 323 aa13.13□□□□□ -0.31
SCAMP1-204ENST00000511551 PRKAR2AP13861 404 aaKnown RBP13.1□□□□□ -0.31
SCAMP1-204ENST00000511551 EVX2Q03828 476 aa13.1□□□□□ -0.31
SCAMP1-204ENST00000511551 PABPN1Q86U42 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
SCAMP1-204ENST00000511551 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
SCAMP1-204ENST00000511551 PRR29P0C7W0 189 aa12.94□□□□□ -0.34
SCAMP1-204ENST00000511551 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
SCAMP1-204ENST00000511551 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
SCAMP1-204ENST00000511551 GABBR2O75899 941 aa12.8□□□□□ -0.36
SCAMP1-204ENST00000511551 FARP1Q9Y4F1 1045 aaPredicted RBP12.75□□□□□ -0.37
SCAMP1-204ENST00000511551 CD44P16070 742 aaKnown RBP12.67□□□□□ -0.38
SCAMP1-204ENST00000511551 STAG3Q9UJ98 1225 aa12.67□□□□□ -0.38
SCAMP1-204ENST00000511551 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
SCAMP1-204ENST00000511551 CLCN6P51797 869 aa12.62□□□□□ -0.39
SCAMP1-204ENST00000511551 CREBZFQ9NS37 354 aa12.62□□□□□ -0.39
SCAMP1-204ENST00000511551 POTEIP0CG38 1075 aa12.53□□□□□ -0.4
SCAMP1-204ENST00000511551 LHX8Q68G74 356 aa12.53□□□□□ -0.4
SCAMP1-204ENST00000511551 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
SCAMP1-204ENST00000511551 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
SCAMP1-204ENST00000511551 MNX1P50219 401 aaPredicted RBP12.41□□□□□ -0.42
SCAMP1-204ENST00000511551 PROM2Q8N271 834 aa12.4□□□□□ -0.42
SCAMP1-204ENST00000511551 DCBLD2Q96PD2 775 aa12.4□□□□□ -0.42
SCAMP1-204ENST00000511551 NPM1P06748 294 aaKnown RBP eCLIP12.37□□□□□ -0.43
SCAMP1-204ENST00000511551 PAK3O75914 559 aaPredicted RBP12.34□□□□□ -0.43
SCAMP1-204ENST00000511551 GALR2O43603 387 aaPredicted RBP12.33□□□□□ -0.44
SCAMP1-204ENST00000511551 PHF12Q96QT6 1004 aa12.28□□□□□ -0.44
SCAMP1-204ENST00000511551 PELP1Q8IZL8 1130 aaKnown RBP12.13□□□□□ -0.47
SCAMP1-204ENST00000511551 MS4A3Q96HJ5 214 aa12.13□□□□□ -0.47
SCAMP1-204ENST00000511551 ASTLQ6HA08 431 aaPredicted RBP12.12□□□□□ -0.47
SCAMP1-204ENST00000511551 POTEB2H3BUK9 544 aa12.11□□□□□ -0.47
SCAMP1-204ENST00000511551 CCDC61Q9Y6R9 512 aa12.11□□□□□ -0.47
SCAMP1-204ENST00000511551 TSPYL2Q9H2G4 693 aaPredicted RBP12.1□□□□□ -0.47
SCAMP1-204ENST00000511551 OTUD5Q96G74 571 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms