RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 DUSP23Q9BVJ7 150 aa4.77□□□□□ -1.65
DEPDC1B-204ENST00000509006 KRTAP9-3Q9BYQ3 159 aa4.77□□□□□ -1.65
DEPDC1B-204ENST00000509006 ATXN3LQ9H3M9 355 aa4.77□□□□□ -1.65
DEPDC1B-204ENST00000509006 CCDC86Q9H6F5 360 aaKnown RBP4.77□□□□□ -1.65
DEPDC1B-204ENST00000509006 B8ZZF3 427 aa4.76□□□□□ -1.65
DEPDC1B-204ENST00000509006 ZNF862O60290 1169 aa4.76□□□□□ -1.65
DEPDC1B-204ENST00000509006 ZSCAN22P10073 491 aaPredicted RBP4.76□□□□□ -1.65
DEPDC1B-204ENST00000509006 HCLS1P14317 486 aaPredicted RBP4.76□□□□□ -1.65
DEPDC1B-204ENST00000509006 BUD31P41223 144 aaPredicted RBP4.76□□□□□ -1.65
DEPDC1B-204ENST00000509006 AP3B2Q13367 1082 aa4.76□□□□□ -1.65
DEPDC1B-204ENST00000509006 TTLL4Q14679 1199 aa4.76□□□□□ -1.65
DEPDC1B-204ENST00000509006 FYB2Q5VWT5 728 aa4.76□□□□□ -1.65
DEPDC1B-204ENST00000509006 TOP6BLQ8N6T0 577 aa4.76□□□□□ -1.65
DEPDC1B-204ENST00000509006 PPP1R16BQ96T49 567 aa4.76□□□□□ -1.65
DEPDC1B-204ENST00000509006 ANO2Q9NQ90 1003 aa4.76□□□□□ -1.65
DEPDC1B-204ENST00000509006 DISC1Q9NRI5 854 aa4.76□□□□□ -1.65
DEPDC1B-204ENST00000509006 FAM53CQ9NYF3 392 aa4.76□□□□□ -1.65
DEPDC1B-204ENST00000509006 MTMR7Q9Y216 660 aa4.76□□□□□ -1.65
DEPDC1B-204ENST00000509006 PCDHGC5Q9Y5F6 944 aa4.76□□□□□ -1.65
DEPDC1B-204ENST00000509006 ICMTO60725 284 aa4.75□□□□□ -1.65
DEPDC1B-204ENST00000509006 RNGTTO60942 597 aaKnown RBP4.75□□□□□ -1.65
DEPDC1B-204ENST00000509006 ABL1P00519 1130 aa4.75□□□□□ -1.65
DEPDC1B-204ENST00000509006 ITPKAP23677 461 aa4.75□□□□□ -1.65
DEPDC1B-204ENST00000509006 ZNF157P51786 506 aaPredicted RBP4.75□□□□□ -1.65
DEPDC1B-204ENST00000509006 ZP2Q05996 745 aa4.75□□□□□ -1.65
DEPDC1B-204ENST00000509006 IKZF1Q13422 519 aa4.75□□□□□ -1.65
DEPDC1B-204ENST00000509006 PRR23BQ6ZRT6 265 aa4.75□□□□□ -1.65
DEPDC1B-204ENST00000509006 SYDE1Q6ZW31 735 aaPredicted RBP4.75□□□□□ -1.65
DEPDC1B-204ENST00000509006 TNKS2Q9H2K2 1166 aa4.75□□□□□ -1.65
DEPDC1B-204ENST00000509006 EGFL7Q9UHF1 273 aa4.75□□□□□ -1.65
DEPDC1B-204ENST00000509006 CTNND2Q9UQB3 1225 aa4.75□□□□□ -1.65
DEPDC1B-204ENST00000509006 IGHA2P01877 340 aa4.74□□□□□ -1.65
DEPDC1B-204ENST00000509006 KRT1P04264 644 aa4.74□□□□□ -1.65
DEPDC1B-204ENST00000509006 NEFMP07197 916 aa4.74□□□□□ -1.65
DEPDC1B-204ENST00000509006 ARHGAP4P98171 946 aa4.74□□□□□ -1.65
DEPDC1B-204ENST00000509006 KIAA0319Q5VV43 1072 aa4.74□□□□□ -1.65
DEPDC1B-204ENST00000509006 ANKLE2Q86XL3 938 aa4.74□□□□□ -1.65
DEPDC1B-204ENST00000509006 HEXIM2Q96MH2 286 aaKnown RBP4.74□□□□□ -1.65
DEPDC1B-204ENST00000509006 EHD4Q9H223 541 aa4.74□□□□□ -1.65
DEPDC1B-204ENST00000509006 C1QTNF9P0C862 333 aa4.73□□□□□ -1.65
DEPDC1B-204ENST00000509006 FAAP100Q0VG06 881 aa4.73□□□□□ -1.65
DEPDC1B-204ENST00000509006 KIF4BQ2VIQ3 1234 aa4.73□□□□□ -1.65
DEPDC1B-204ENST00000509006 TTLL10Q6ZVT0 673 aa4.73□□□□□ -1.65
DEPDC1B-204ENST00000509006 SIAH1Q8IUQ4 282 aa4.73□□□□□ -1.65
DEPDC1B-204ENST00000509006 ISL2Q96A47 359 aa4.73□□□□□ -1.65
DEPDC1B-204ENST00000509006 FAM129BQ96TA1 746 aa4.73□□□□□ -1.65
DEPDC1B-204ENST00000509006 ABCB6Q9NP58 842 aa4.73□□□□□ -1.65
DEPDC1B-204ENST00000509006 NPHS2Q9NP85 383 aa4.73□□□□□ -1.65
DEPDC1B-204ENST00000509006 GLI1P08151 1106 aa4.72□□□□□ -1.65
DEPDC1B-204ENST00000509006 SLFN14P0C7P3 912 aa4.72□□□□□ -1.65
DEPDC1B-204ENST00000509006 SERPINB4P48594 390 aa4.72□□□□□ -1.65
DEPDC1B-204ENST00000509006 MPZL3Q6UWV2 235 aa4.72□□□□□ -1.65
DEPDC1B-204ENST00000509006 SPACA3Q8IXA5 215 aa4.72□□□□□ -1.65
DEPDC1B-204ENST00000509006 ASB11Q8WXH4 323 aa4.72□□□□□ -1.65
DEPDC1B-204ENST00000509006 PCOLCE2Q9UKZ9 415 aa4.72□□□□□ -1.65
DEPDC1B-204ENST00000509006 USTQ9Y2C2 406 aa4.72□□□□□ -1.65
DEPDC1B-204ENST00000509006 GTF3C3Q9Y5Q9 886 aa4.72□□□□□ -1.65
DEPDC1B-204ENST00000509006 SNX11Q9Y5W9 270 aa4.72□□□□□ -1.65
DEPDC1B-204ENST00000509006 H3BRB1 525 aa4.71□□□□□ -1.66
DEPDC1B-204ENST00000509006 GSTP1P09211 210 aaKnown RBP4.71□□□□□ -1.66
DEPDC1B-204ENST00000509006 PTPN12Q05209 780 aaKnown RBP4.71□□□□□ -1.66
DEPDC1B-204ENST00000509006 ORC1Q13415 861 aa4.71□□□□□ -1.66
DEPDC1B-204ENST00000509006 FAM214BQ7L5A3 538 aa4.71□□□□□ -1.66
DEPDC1B-204ENST00000509006 KIRREL1Q96J84 757 aa4.71□□□□□ -1.66
DEPDC1B-204ENST00000509006 TUT1Q9H6E5 874 aaKnown RBP4.71□□□□□ -1.66
DEPDC1B-204ENST00000509006 NPIPB6E9PJ23 425 aa4.7□□□□□ -1.66
DEPDC1B-204ENST00000509006 INHBBP09529 407 aa4.7□□□□□ -1.66
DEPDC1B-204ENST00000509006 AFMP43652 599 aa4.7□□□□□ -1.66
DEPDC1B-204ENST00000509006 NKPD1Q17RQ9 610 aa4.7□□□□□ -1.66
DEPDC1B-204ENST00000509006 PRPF40BQ6NWY9 871 aaKnown RBP4.7□□□□□ -1.66
DEPDC1B-204ENST00000509006 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.7□□□□□ -1.66
DEPDC1B-204ENST00000509006 DIRC2Q96SL1 478 aa4.7□□□□□ -1.66
DEPDC1B-204ENST00000509006 SSU72Q9NP77 194 aaKnown RBP4.7□□□□□ -1.66
DEPDC1B-204ENST00000509006 KRT82Q9NSB4 513 aa4.7□□□□□ -1.66
DEPDC1B-204ENST00000509006 BRPF3Q9ULD4 1205 aa4.7□□□□□ -1.66
DEPDC1B-204ENST00000509006 PITPNM2Q9BZ72 1349 aa4.7□□□□□ -1.66
DEPDC1B-204ENST00000509006 NFIBO00712 420 aa4.69□□□□□ -1.66
DEPDC1B-204ENST00000509006 GPR182O15218 404 aa4.69□□□□□ -1.66
DEPDC1B-204ENST00000509006 CPNE3O75131 537 aaKnown RBP4.69□□□□□ -1.66
DEPDC1B-204ENST00000509006 NEFLP07196 543 aa4.69□□□□□ -1.66
DEPDC1B-204ENST00000509006 RPS26P11Q5JNZ5 115 aaPredicted RBP4.69□□□□□ -1.66
DEPDC1B-204ENST00000509006 PDZD3Q86UT5 571 aa4.69□□□□□ -1.66
DEPDC1B-204ENST00000509006 GLYCTKQ8IVS8 523 aa4.69□□□□□ -1.66
DEPDC1B-204ENST00000509006 KCNB2Q92953 911 aa4.69□□□□□ -1.66
DEPDC1B-204ENST00000509006 CITED4Q96RK1 184 aa4.69□□□□□ -1.66
DEPDC1B-204ENST00000509006 NSUN3Q9H649 340 aaKnown RBP4.69□□□□□ -1.66
DEPDC1B-204ENST00000509006 KCNK12Q9HB15 430 aa4.69□□□□□ -1.66
DEPDC1B-204ENST00000509006 C19orf73Q9NVV2 129 aa4.69□□□□□ -1.66
DEPDC1B-204ENST00000509006 TMEM238LA0A1B0GVL6 79 aa4.68□□□□□ -1.66
DEPDC1B-204ENST00000509006 NDUFB5O43674 189 aa4.68□□□□□ -1.66
DEPDC1B-204ENST00000509006 PDE3BQ13370 1112 aa4.68□□□□□ -1.66
DEPDC1B-204ENST00000509006 TMEM67Q5HYA8 995 aa4.68□□□□□ -1.66
DEPDC1B-204ENST00000509006 B4GALNT3Q6L9W6 998 aa4.68□□□□□ -1.66
DEPDC1B-204ENST00000509006 CYFIP1Q7L576 1253 aa4.68□□□□□ -1.66
DEPDC1B-204ENST00000509006 UBE3DQ7Z6J8 389 aa4.68□□□□□ -1.66
DEPDC1B-204ENST00000509006 TXNDC2Q86VQ3 553 aa4.68□□□□□ -1.66
DEPDC1B-204ENST00000509006 FBXO15Q8NCQ5 510 aaPredicted RBP4.68□□□□□ -1.66
DEPDC1B-204ENST00000509006 STK35Q8TDR2 534 aa4.68□□□□□ -1.66
DEPDC1B-204ENST00000509006 CCDC74AQ96AQ1 378 aa4.68□□□□□ -1.66
DEPDC1B-204ENST00000509006 DNAJC25Q9H1X3 360 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms