RNA–Protein interactions for RNA: ENST00000508940.1

PROM1-209, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-209ENST00000508940 DDX4Q9NQI0 724 aaKnown RBP29.72■■■□□ 2.35
PROM1-209ENST00000508940 IDH1O75874 414 aaKnown RBP29.71■■■□□ 2.35
PROM1-209ENST00000508940 PLCG2P16885 1265 aa29.71■■■□□ 2.35
PROM1-209ENST00000508940 OTUD5Q96G74 571 aa29.71■■■□□ 2.35
PROM1-209ENST00000508940 SNCAIPQ9Y6H5 919 aa29.71■■■□□ 2.35
PROM1-209ENST00000508940 NPM3O75607 178 aaKnown RBP29.7■■■□□ 2.35
PROM1-209ENST00000508940 ERO1BQ86YB8 467 aa29.7■■■□□ 2.35
PROM1-209ENST00000508940 TEX11Q8IYF3 940 aa29.7■■■□□ 2.35
PROM1-209ENST00000508940 CNKSR2Q8WXI2 1034 aa29.7■■■□□ 2.35
PROM1-209ENST00000508940 AATFQ9NY61 560 aaKnown RBP eCLIP29.7■■■□□ 2.35
PROM1-209ENST00000508940 RFX7Q2KHR2 1363 aa29.69■■■□□ 2.34
PROM1-209ENST00000508940 SPDYE5A6NIY4 337 aa29.69■■■□□ 2.34
PROM1-209ENST00000508940 GTF2A2P52657 109 aa29.69■■■□□ 2.34
PROM1-209ENST00000508940 LRRCC1Q9C099 1032 aa29.69■■■□□ 2.34
PROM1-209ENST00000508940 ZNF112Q9UJU3 913 aa29.69■■■□□ 2.34
PROM1-209ENST00000508940 NDUFB9Q9Y6M9 179 aa29.69■■■□□ 2.34
PROM1-209ENST00000508940 DDTLA6NHG4 134 aaPredicted RBP29.68■■■□□ 2.34
PROM1-209ENST00000508940 CAPN15O75808 1086 aa29.68■■■□□ 2.34
PROM1-209ENST00000508940 CYP7A1P22680 504 aa29.68■■■□□ 2.34
PROM1-209ENST00000508940 INPP5BP32019 993 aa29.68■■■□□ 2.34
PROM1-209ENST00000508940 MAP3K12Q12852 859 aa29.68■■■□□ 2.34
PROM1-209ENST00000508940 TTF1Q15361 905 aaPredicted RBP29.67■■■□□ 2.34
PROM1-209ENST00000508940 SH3BP5LQ7L8J4 393 aa29.67■■■□□ 2.34
PROM1-209ENST00000508940 SH3RF3Q8TEJ3 882 aaPredicted RBP29.67■■■□□ 2.34
PROM1-209ENST00000508940 PPP4CP60510 307 aa29.66■■■□□ 2.34
PROM1-209ENST00000508940 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.66■■■□□ 2.34
PROM1-209ENST00000508940 ANTXR1Q9H6X2 564 aa29.66■■■□□ 2.34
PROM1-209ENST00000508940 MAST2Q6P0Q8 1798 aa29.66■■■□□ 2.34
PROM1-209ENST00000508940 TESPA1A2RU30 521 aaPredicted RBP29.65■■■□□ 2.34
PROM1-209ENST00000508940 IGF2BP3O00425 579 aaKnown RBP eCLIP29.65■■■□□ 2.34
PROM1-209ENST00000508940 DGKZQ13574 1117 aa29.65■■■□□ 2.34
PROM1-209ENST00000508940 MAGEB6Q8N7X4 407 aa29.65■■■□□ 2.34
PROM1-209ENST00000508940 MS4A4AQ96JQ5 239 aa29.65■■■□□ 2.34
PROM1-209ENST00000508940 CFHR5Q9BXR6 569 aa29.65■■■□□ 2.34
PROM1-209ENST00000508940 MYO5AQ9Y4I1 1855 aaKnown RBP29.65■■■□□ 2.34
PROM1-209ENST00000508940 CCL15-CCL14A0A0B4J2E2 113 aa29.64■■■□□ 2.34
PROM1-209ENST00000508940 GPR25O00155 361 aa29.64■■■□□ 2.34
PROM1-209ENST00000508940 PPATQ06203 517 aa29.64■■■□□ 2.34
PROM1-209ENST00000508940 PPIL2Q13356 520 aa29.64■■■□□ 2.34
PROM1-209ENST00000508940 CCL15Q16663 113 aa29.64■■■□□ 2.34
PROM1-209ENST00000508940 TMED8Q6PL24 325 aaPredicted RBP29.64■■■□□ 2.34
PROM1-209ENST00000508940 ADGRA1Q86SQ6 560 aa29.64■■■□□ 2.34
PROM1-209ENST00000508940 DNAJC2Q99543 621 aaKnown RBP29.64■■■□□ 2.34
PROM1-209ENST00000508940 OSBPL5Q9H0X9 879 aaPredicted RBP29.64■■■□□ 2.34
PROM1-209ENST00000508940 DOCK2Q92608 1830 aa29.64■■■□□ 2.33
PROM1-209ENST00000508940 CETPP11597 493 aa29.63■■■□□ 2.33
PROM1-209ENST00000508940 NOL9Q5SY16 702 aaKnown RBP29.63■■■□□ 2.33
PROM1-209ENST00000508940 DCTPP1Q9H773 170 aa29.63■■■□□ 2.33
PROM1-209ENST00000508940 IRF6O14896 467 aa29.62■■■□□ 2.33
PROM1-209ENST00000508940 SNAPC2Q13487 334 aa29.62■■■□□ 2.33
PROM1-209ENST00000508940 NOM1Q5C9Z4 860 aaKnown RBP29.62■■■□□ 2.33
PROM1-209ENST00000508940 CERS3Q8IU89 383 aa29.62■■■□□ 2.33
PROM1-209ENST00000508940 TGFBRAP1Q8WUH2 860 aa29.62■■■□□ 2.33
PROM1-209ENST00000508940 ZNF296Q8WUU4 475 aaPredicted RBP29.62■■■□□ 2.33
PROM1-209ENST00000508940 PTPN18Q99952 460 aa29.62■■■□□ 2.33
PROM1-209ENST00000508940 PICK1Q9NRD5 415 aa29.62■■■□□ 2.33
PROM1-209ENST00000508940 ATRNL1Q5VV63 1379 aa29.62■■■□□ 2.33
PROM1-209ENST00000508940 SMARCA5O60264 1052 aaPredicted RBP29.61■■■□□ 2.33
PROM1-209ENST00000508940 MAP3K10Q02779 954 aa29.61■■■□□ 2.33
PROM1-209ENST00000508940 BRI3BPQ8WY22 251 aa29.61■■■□□ 2.33
PROM1-209ENST00000508940 ABHD8Q96I13 439 aa29.61■■■□□ 2.33
PROM1-209ENST00000508940 MCOLN1Q9GZU1 580 aa29.61■■■□□ 2.33
PROM1-209ENST00000508940 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.61■■■□□ 2.33
PROM1-209ENST00000508940 LAMB1P07942 1786 aa29.61■■■□□ 2.33
PROM1-209ENST00000508940 PHF20L1A8MW92 1017 aa29.6■■■□□ 2.33
PROM1-209ENST00000508940 GOLIM4O00461 696 aa29.6■■■□□ 2.33
PROM1-209ENST00000508940 TBC1D12O60347 775 aa29.6■■■□□ 2.33
PROM1-209ENST00000508940 FKTNO75072 461 aa29.6■■■□□ 2.33
PROM1-209ENST00000508940 CRBNQ96SW2 442 aa29.6■■■□□ 2.33
PROM1-209ENST00000508940 BOLA2Q9H3K6 86 aa29.6■■■□□ 2.33
PROM1-209ENST00000508940 R3HDMLQ9H3Y0 253 aa29.6■■■□□ 2.33
PROM1-209ENST00000508940 ATP5JP18859 108 aa29.59■■■□□ 2.33
PROM1-209ENST00000508940 DYNLL1P63167 89 aaKnown RBP29.59■■■□□ 2.33
PROM1-209ENST00000508940 MAPKAPK5Q8IW41 473 aa29.59■■■□□ 2.33
PROM1-209ENST00000508940 SCYL3Q8IZE3 742 aa29.59■■■□□ 2.33
PROM1-209ENST00000508940 MIGA1Q8NAN2 632 aa29.59■■■□□ 2.33
PROM1-209ENST00000508940 DHX36Q9H2U1 1008 aaKnown RBP29.59■■■□□ 2.33
PROM1-209ENST00000508940 PCDHB15Q9Y5E8 787 aa29.59■■■□□ 2.33
PROM1-209ENST00000508940 CTNND1O60716 968 aaKnown RBP29.58■■■□□ 2.33
PROM1-209ENST00000508940 COL2A1P02458 1487 aaPredicted RBP29.58■■■□□ 2.33
PROM1-209ENST00000508940 CTU1Q7Z7A3 348 aaKnown RBP29.58■■■□□ 2.33
PROM1-209ENST00000508940 SLC9C2Q5TAH2 1124 aa29.57■■■□□ 2.32
PROM1-209ENST00000508940 PAG1Q9NWQ8 432 aa29.57■■■□□ 2.32
PROM1-209ENST00000508940 PI4KBQ9UBF8 816 aa29.57■■■□□ 2.32
PROM1-209ENST00000508940 SLURP2P0DP57 97 aa29.56■■■□□ 2.32
PROM1-209ENST00000508940 USP5P45974 858 aa29.56■■■□□ 2.32
PROM1-209ENST00000508940 CRHR2Q13324 411 aa29.56■■■□□ 2.32
PROM1-209ENST00000508940 TAF1CQ15572 869 aaPredicted RBP29.56■■■□□ 2.32
PROM1-209ENST00000508940 ZFYVE28Q9HCC9 887 aa29.56■■■□□ 2.32
PROM1-209ENST00000508940 FLT1P17948 1338 aa29.55■■■□□ 2.32
PROM1-209ENST00000508940 HAUS7Q99871 368 aa29.55■■■□□ 2.32
PROM1-209ENST00000508940 TRIM34Q9BYJ4 488 aa29.55■■■□□ 2.32
PROM1-209ENST00000508940 HERC5Q9UII4 1024 aaKnown RBP29.55■■■□□ 2.32
PROM1-209ENST00000508940 FAM196BA6NMK8 535 aa29.54■■■□□ 2.32
PROM1-209ENST00000508940 PDE6AP16499 860 aa29.54■■■□□ 2.32
PROM1-209ENST00000508940 PTPRAP18433 802 aa29.54■■■□□ 2.32
PROM1-209ENST00000508940 FAM43AQ8N2R8 423 aa29.54■■■□□ 2.32
PROM1-209ENST00000508940 GPATCH3Q96I76 525 aa29.54■■■□□ 2.32
PROM1-209ENST00000508940 KCNH4Q9UQ05 1017 aa29.54■■■□□ 2.32
PROM1-209ENST00000508940 ZHX2Q9Y6X8 837 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms