RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 CCDC9Q9Y3X0 531 aaKnown RBP7.27□□□□□ -1.25
HMGB1P44-201ENST00000508597 COL3A1P02461 1466 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P44-201ENST00000508597 IGSF1Q8N6C5 1336 aa7.27□□□□□ -1.25
HMGB1P44-201ENST00000508597 KDRP35968 1356 aa7.26□□□□□ -1.25
HMGB1P44-201ENST00000508597 SASH3O75995 380 aa7.26□□□□□ -1.25
HMGB1P44-201ENST00000508597 EPXP11678 715 aa7.26□□□□□ -1.25
HMGB1P44-201ENST00000508597 MPSTP25325 297 aa7.26□□□□□ -1.25
HMGB1P44-201ENST00000508597 RXRBP28702 533 aa7.26□□□□□ -1.25
HMGB1P44-201ENST00000508597 ARSDP51689 593 aa7.26□□□□□ -1.25
HMGB1P44-201ENST00000508597 ECM1Q16610 540 aa7.26□□□□□ -1.25
HMGB1P44-201ENST00000508597 HIF1AQ16665 826 aa7.26□□□□□ -1.25
HMGB1P44-201ENST00000508597 NBPF6Q5VWK0 638 aa7.26□□□□□ -1.25
HMGB1P44-201ENST00000508597 HELQQ8TDG4 1101 aa7.26□□□□□ -1.25
HMGB1P44-201ENST00000508597 LTV1Q96GA3 475 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P44-201ENST00000508597 NBPF4Q96M43 638 aa7.26□□□□□ -1.25
HMGB1P44-201ENST00000508597 RGPD1P0DJD0 1748 aa7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 ABL1P00519 1130 aa7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 NEFMP07197 916 aa7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 IL2RBP14784 551 aa7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 ADH6P28332 368 aa7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 ZAP70P43403 619 aa7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 WDR43Q15061 677 aaKnown RBP eCLIP7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 AMOTQ4VCS5 1084 aa7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 SLCO4C1Q6ZQN7 724 aa7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 SND1Q7KZF4 910 aaKnown RBP eCLIP7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 GOLGA6L1Q8N7Z2 621 aa7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 GPR152Q8TDT2 470 aa7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 RAPGEF4Q8WZA2 1011 aa7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 BTBD6Q96KE9 485 aa7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 RGS17Q9UGC6 210 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 GDF2Q9UK05 429 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 MTMR7Q9Y216 660 aa7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 CNTNAP5Q8WYK1 1306 aa7.25□□□□□ -1.25
HMGB1P44-201ENST00000508597 RGPD2P0DJD1 1756 aa7.24□□□□□ -1.25
HMGB1P44-201ENST00000508597 ZBTB42B2RXF5 422 aa7.24□□□□□ -1.25
HMGB1P44-201ENST00000508597 EXOC5O00471 708 aa7.24□□□□□ -1.25
HMGB1P44-201ENST00000508597 U2SURPO15042 1029 aaKnown RBP7.24□□□□□ -1.25
HMGB1P44-201ENST00000508597 U2AF1L5P0DN76 240 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P44-201ENST00000508597 NFKB1P19838 968 aa7.24□□□□□ -1.25
HMGB1P44-201ENST00000508597 GSK3AP49840 483 aa7.24□□□□□ -1.25
HMGB1P44-201ENST00000508597 U2AF1Q01081 240 aaKnown RBP eCLIP7.24□□□□□ -1.25
HMGB1P44-201ENST00000508597 CCINQ13939 588 aa7.24□□□□□ -1.25
HMGB1P44-201ENST00000508597 TMCO4Q5TGY1 634 aa7.24□□□□□ -1.25
HMGB1P44-201ENST00000508597 SULT6B1Q6IMI4 303 aa7.24□□□□□ -1.25
HMGB1P44-201ENST00000508597 MRS2Q9HD23 443 aa7.24□□□□□ -1.25
HMGB1P44-201ENST00000508597 STARD13Q9Y3M8 1113 aa7.24□□□□□ -1.25
HMGB1P44-201ENST00000508597 WNK3Q9BYP7 1800 aa7.24□□□□□ -1.25
HMGB1P44-201ENST00000508597 GLI3P10071 1580 aa7.24□□□□□ -1.25
HMGB1P44-201ENST00000508597 PARP4Q9UKK3 1724 aaKnown RBP7.24□□□□□ -1.25
HMGB1P44-201ENST00000508597 SIN3BO75182 1162 aa7.23□□□□□ -1.25
HMGB1P44-201ENST00000508597 EIF1AXP47813 144 aaKnown RBP7.23□□□□□ -1.25
HMGB1P44-201ENST00000508597 MAP3K10Q02779 954 aa7.23□□□□□ -1.25
HMGB1P44-201ENST00000508597 DDB1Q16531 1140 aa7.23□□□□□ -1.25
HMGB1P44-201ENST00000508597 PLEKHO1Q53GL0 409 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P44-201ENST00000508597 C8orf86Q6ZUL3 223 aa7.23□□□□□ -1.25
HMGB1P44-201ENST00000508597 NEDD1Q8NHV4 660 aa7.23□□□□□ -1.25
HMGB1P44-201ENST00000508597 IGFLR1Q9H665 355 aa7.23□□□□□ -1.25
HMGB1P44-201ENST00000508597 USP35Q9P2H5 1018 aa7.23□□□□□ -1.25
HMGB1P44-201ENST00000508597 EGFL7Q9UHF1 273 aa7.23□□□□□ -1.25
HMGB1P44-201ENST00000508597 SPG7Q9UQ90 795 aa7.23□□□□□ -1.25
HMGB1P44-201ENST00000508597 DISP2A7MBM2 1401 aa7.23□□□□□ -1.25
HMGB1P44-201ENST00000508597 OVOS2A0A0G2JMS6 1433 aa7.22□□□□□ -1.25
HMGB1P44-201ENST00000508597 A6NHS1 94 aa7.22□□□□□ -1.25
HMGB1P44-201ENST00000508597 XYLBO75191 536 aa7.22□□□□□ -1.25
HMGB1P44-201ENST00000508597 ZCRB1Q8TBF4 217 aaKnown RBP7.22□□□□□ -1.25
HMGB1P44-201ENST00000508597 PNISRQ8TF01 805 aaKnown RBP7.22□□□□□ -1.25
HMGB1P44-201ENST00000508597 AVENQ9NQS1 362 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P44-201ENST00000508597 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P44-201ENST00000508597 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P44-201ENST00000508597 THSD7AQ9UPZ6 1657 aa7.22□□□□□ -1.25
HMGB1P44-201ENST00000508597 HSP90AB1P08238 724 aaKnown RBP7.21□□□□□ -1.26
HMGB1P44-201ENST00000508597 NPR3P17342 541 aa7.21□□□□□ -1.26
HMGB1P44-201ENST00000508597 PDE3BQ13370 1112 aa7.21□□□□□ -1.26
HMGB1P44-201ENST00000508597 LINC00114Q6XXX2 140 aa7.21□□□□□ -1.26
HMGB1P44-201ENST00000508597 CHSY3Q70JA7 882 aa7.21□□□□□ -1.26
HMGB1P44-201ENST00000508597 NGEFQ8N5V2 710 aa7.21□□□□□ -1.26
HMGB1P44-201ENST00000508597 TNFRSF25Q93038 417 aa7.21□□□□□ -1.26
HMGB1P44-201ENST00000508597 LRRC4BQ9NT99 713 aa7.21□□□□□ -1.26
HMGB1P44-201ENST00000508597 CCDC87Q9NVE4 849 aa7.21□□□□□ -1.26
HMGB1P44-201ENST00000508597 KAT6BQ8WYB5 2073 aa7.21□□□□□ -1.26
HMGB1P44-201ENST00000508597 PCDH11XQ9BZA7 1347 aa7.21□□□□□ -1.26
HMGB1P44-201ENST00000508597 PCDH11YQ9BZA8 1340 aa7.21□□□□□ -1.26
HMGB1P44-201ENST00000508597 MAPK8IP3Q9UPT6 1336 aa7.21□□□□□ -1.26
HMGB1P44-201ENST00000508597 PKD1L3Q7Z443 1732 aa7.21□□□□□ -1.26
HMGB1P44-201ENST00000508597 BCL9O00512 1426 aa7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 TNS2Q63HR2 1409 aa7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 ELOA3CA0A087WX78 387 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 SOWAHDA6NJG2 315 aa7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 ELOA3DA6NLF2 546 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 ADARB2-AS1A8MUL3 147 aa7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 HTATSF1O43719 755 aaKnown RBP7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 FZD6O60353 706 aa7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 EGFRP00533 1210 aa7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 HMOX1P09601 288 aa7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 PRKAR2BP31323 418 aa7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 FKBP4Q02790 459 aaKnown RBP eCLIP7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 MLLT1Q03111 559 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 PLAURQ03405 335 aa7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 TBC1D8BQ0IIM8 1120 aa7.2□□□□□ -1.26
HMGB1P44-201ENST00000508597 ELOA3BQ3SY89 546 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms