RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 ECM2O94769 699 aaPredicted RBP20.61■□□□□ 0.89
SNF8-205ENST00000507302 FARP2O94887 1054 aaPredicted RBP20.61■□□□□ 0.89
SNF8-205ENST00000507302 PRDX5P30044 214 aa20.61■□□□□ 0.89
SNF8-205ENST00000507302 FASTKD5Q7L8L6 764 aaKnown RBP20.61■□□□□ 0.89
SNF8-205ENST00000507302 ZFPM1Q8IX07 1006 aa20.61■□□□□ 0.89
SNF8-205ENST00000507302 MRS2Q9HD23 443 aa20.61■□□□□ 0.89
SNF8-205ENST00000507302 PAK6Q9NQU5 681 aaPredicted RBP20.61■□□□□ 0.89
SNF8-205ENST00000507302 SLC5A1P13866 664 aa20.6■□□□□ 0.89
SNF8-205ENST00000507302 PTPRAP18433 802 aa20.6■□□□□ 0.89
SNF8-205ENST00000507302 SCYL3Q8IZE3 742 aa20.6■□□□□ 0.89
SNF8-205ENST00000507302 CRISPLD2Q9H0B8 497 aa20.6■□□□□ 0.89
SNF8-205ENST00000507302 FBXO3Q9UK99 471 aa20.6■□□□□ 0.89
SNF8-205ENST00000507302 A0A0C4DFX4 3053 aa20.6■□□□□ 0.89
SNF8-205ENST00000507302 ADCY3O60266 1144 aa20.59■□□□□ 0.89
SNF8-205ENST00000507302 ENTPD3O75355 529 aa20.59■□□□□ 0.89
SNF8-205ENST00000507302 FLT3LGP49771 235 aa20.59■□□□□ 0.89
SNF8-205ENST00000507302 GAKO14976 1311 aa20.58■□□□□ 0.89
SNF8-205ENST00000507302 SH3BP5LQ7L8J4 393 aa20.58■□□□□ 0.89
SNF8-205ENST00000507302 USP40Q9NVE5 1235 aa20.58■□□□□ 0.89
SNF8-205ENST00000507302 BIN2Q9UBW5 565 aaPredicted RBP20.58■□□□□ 0.89
SNF8-205ENST00000507302 ZHX2Q9Y6X8 837 aa20.58■□□□□ 0.89
SNF8-205ENST00000507302 LOC285556D6RIA3 1793 aa20.57■□□□□ 0.88
SNF8-205ENST00000507302 SEMA3EO15041 775 aa20.57■□□□□ 0.88
SNF8-205ENST00000507302 INHAP05111 366 aa20.57■□□□□ 0.88
SNF8-205ENST00000507302 LDHBP07195 334 aaKnown RBP20.57■□□□□ 0.88
SNF8-205ENST00000507302 SOX1O00570 391 aaPredicted RBP20.56■□□□□ 0.88
SNF8-205ENST00000507302 CIAO1O76071 339 aa20.56■□□□□ 0.88
SNF8-205ENST00000507302 FAM163AQ96GL9 167 aaPredicted RBP20.56■□□□□ 0.88
SNF8-205ENST00000507302 CUL9Q8IWT3 2517 aa20.55■□□□□ 0.88
SNF8-205ENST00000507302 CTNND1O60716 968 aaKnown RBP20.55■□□□□ 0.88
SNF8-205ENST00000507302 ELNP15502 786 aa20.55■□□□□ 0.88
SNF8-205ENST00000507302 RGS3P49796 1198 aa20.55■□□□□ 0.88
SNF8-205ENST00000507302 PICK1Q9NRD5 415 aa20.55■□□□□ 0.88
SNF8-205ENST00000507302 PDS5AQ29RF7 1337 aaKnown RBP20.54■□□□□ 0.88
SNF8-205ENST00000507302 BMP8BP34820 402 aa20.54■□□□□ 0.88
SNF8-205ENST00000507302 GPR153Q6NV75 609 aa20.54■□□□□ 0.88
SNF8-205ENST00000507302 DENND2AQ9ULE3 1009 aa20.54■□□□□ 0.88
SNF8-205ENST00000507302 PLXNB2O15031 1838 aa20.53■□□□□ 0.88
SNF8-205ENST00000507302 EVI5O60447 810 aa20.53■□□□□ 0.88
SNF8-205ENST00000507302 ATP2B3Q16720 1220 aa20.53■□□□□ 0.88
SNF8-205ENST00000507302 DEFB118Q96PH6 123 aa20.53■□□□□ 0.88
SNF8-205ENST00000507302 GDF15Q99988 308 aa20.53■□□□□ 0.88
SNF8-205ENST00000507302 GNL3LQ9NVN8 582 aaKnown RBP20.53■□□□□ 0.88
SNF8-205ENST00000507302 AGTPBP1Q9UPW5 1226 aa20.53■□□□□ 0.88
SNF8-205ENST00000507302 DDTLA6NHG4 134 aaPredicted RBP20.52■□□□□ 0.88
SNF8-205ENST00000507302 TNPO2O14787 897 aaKnown RBP20.52■□□□□ 0.88
SNF8-205ENST00000507302 TBC1D12O60347 775 aa20.52■□□□□ 0.88
SNF8-205ENST00000507302 NPM3O75607 178 aaKnown RBP20.52■□□□□ 0.88
SNF8-205ENST00000507302 ZEB1P37275 1124 aaPredicted RBP20.52■□□□□ 0.88
SNF8-205ENST00000507302 PHKA1P46020 1223 aa20.52■□□□□ 0.88
SNF8-205ENST00000507302 FAM110CQ1W6H9 321 aa20.52■□□□□ 0.88
SNF8-205ENST00000507302 ANKLE1Q8NAG6 615 aa20.52■□□□□ 0.88
SNF8-205ENST00000507302 DDX4Q9NQI0 724 aaKnown RBP20.52■□□□□ 0.88
SNF8-205ENST00000507302 ATAD5Q96QE3 1844 aa20.51■□□□□ 0.87
SNF8-205ENST00000507302 DLL1O00548 723 aa20.51■□□□□ 0.87
SNF8-205ENST00000507302 TFRCP02786 760 aaKnown RBP20.51■□□□□ 0.87
SNF8-205ENST00000507302 GADL1Q6ZQY3 521 aa20.51■□□□□ 0.87
SNF8-205ENST00000507302 ZGPATQ8N5A5 531 aaKnown RBP20.51■□□□□ 0.87
SNF8-205ENST00000507302 SLC17A8Q8NDX2 589 aa20.51■□□□□ 0.87
SNF8-205ENST00000507302 SSH1Q8WYL5 1049 aa20.51■□□□□ 0.87
SNF8-205ENST00000507302 LRCH3Q96II8 777 aa20.51■□□□□ 0.87
SNF8-205ENST00000507302 COL2A1P02458 1487 aaPredicted RBP20.5■□□□□ 0.87
SNF8-205ENST00000507302 SLURP2P0DP57 97 aa20.5■□□□□ 0.87
SNF8-205ENST00000507302 MNX1P50219 401 aaPredicted RBP20.5■□□□□ 0.87
SNF8-205ENST00000507302 PROCA1Q8NCQ7 364 aaPredicted RBP20.5■□□□□ 0.87
SNF8-205ENST00000507302 PAWRQ96IZ0 340 aaKnown RBP20.5■□□□□ 0.87
SNF8-205ENST00000507302 CEP126Q9P2H0 1117 aa20.5■□□□□ 0.87
SNF8-205ENST00000507302 STAP2Q9UGK3 403 aa20.5■□□□□ 0.87
SNF8-205ENST00000507302 SMCR8Q8TEV9 937 aaPredicted RBP20.49■□□□□ 0.87
SNF8-205ENST00000507302 COA7Q96BR5 231 aa20.49■□□□□ 0.87
SNF8-205ENST00000507302 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.49■□□□□ 0.87
SNF8-205ENST00000507302 GJD2Q9UKL4 321 aa20.49■□□□□ 0.87
SNF8-205ENST00000507302 LRRFIP2Q9Y608 721 aaKnown RBP20.49■□□□□ 0.87
SNF8-205ENST00000507302 DDX60LQ5H9U9 1706 aaKnown RBP20.48■□□□□ 0.87
SNF8-205ENST00000507302 IL15P40933 162 aaPredicted RBP20.48■□□□□ 0.87
SNF8-205ENST00000507302 RHBDL3P58872 404 aa20.48■□□□□ 0.87
SNF8-205ENST00000507302 TREML2Q5T2D2 321 aa20.48■□□□□ 0.87
SNF8-205ENST00000507302 CCDC102BQ68D86 513 aa20.48■□□□□ 0.87
SNF8-205ENST00000507302 NECAB2Q7Z6G3 386 aa20.48■□□□□ 0.87
SNF8-205ENST00000507302 ANKRD13CQ8N6S4 541 aa20.48■□□□□ 0.87
SNF8-205ENST00000507302 GPR75-ASB3A0A0A6YYF3 556 aa20.47■□□□□ 0.87
SNF8-205ENST00000507302 TRIM75PA6NK02 468 aa20.47■□□□□ 0.87
SNF8-205ENST00000507302 RASGRF1Q13972 1273 aa20.47■□□□□ 0.87
SNF8-205ENST00000507302 DIS3LQ8TF46 1054 aaKnown RBP20.47■□□□□ 0.87
SNF8-205ENST00000507302 ZNF384Q8TF68 577 aa20.47■□□□□ 0.87
SNF8-205ENST00000507302 COPRSQ9NQ92 184 aa20.47■□□□□ 0.87
SNF8-205ENST00000507302 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.47■□□□□ 0.87
SNF8-205ENST00000507302 PNMA3Q9UL41 463 aa20.47■□□□□ 0.87
SNF8-205ENST00000507302 HMGCRP04035 888 aa20.46■□□□□ 0.87
SNF8-205ENST00000507302 GCLCP48506 637 aaPredicted RBP20.46■□□□□ 0.87
SNF8-205ENST00000507302 ALDH1L2Q3SY69 923 aa20.46■□□□□ 0.87
SNF8-205ENST00000507302 SLF2Q8IX21 1173 aa20.46■□□□□ 0.87
SNF8-205ENST00000507302 TBC1D2Q9BYX2 928 aa20.46■□□□□ 0.87
SNF8-205ENST00000507302 OSBPL5Q9H0X9 879 aaPredicted RBP20.46■□□□□ 0.87
SNF8-205ENST00000507302 SIL1Q9H173 461 aa20.46■□□□□ 0.87
SNF8-205ENST00000507302 MROH7-TTC4A0A0A0MT08 1334 aa20.46■□□□□ 0.87
SNF8-205ENST00000507302 MAP4K4O95819 1239 aaPredicted RBP20.45■□□□□ 0.86
SNF8-205ENST00000507302 ADORA1P30542 326 aa20.45■□□□□ 0.86
SNF8-205ENST00000507302 LRIT3Q3SXY7 679 aa20.45■□□□□ 0.86
SNF8-205ENST00000507302 SH3D19Q5HYK7 790 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms