RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 GRIA4P48058 902 aa7.92□□□□□ -1.14
SPCS3-202ENST00000507001 PI16Q6UXB8 463 aa7.92□□□□□ -1.14
SPCS3-202ENST00000507001 TRIM56Q9BRZ2 755 aaKnown RBP7.92□□□□□ -1.14
SPCS3-202ENST00000507001 LIN7BQ9HAP6 207 aa7.92□□□□□ -1.14
SPCS3-202ENST00000507001 C1GALT1Q9NS00 363 aa7.92□□□□□ -1.14
SPCS3-202ENST00000507001 GADD45BO75293 160 aaPredicted RBP7.91□□□□□ -1.14
SPCS3-202ENST00000507001 PAPLNO95428 1278 aa7.91□□□□□ -1.14
SPCS3-202ENST00000507001 GNA15P30679 374 aa7.91□□□□□ -1.14
SPCS3-202ENST00000507001 C9orf131Q5VYM1 1079 aa7.91□□□□□ -1.14
SPCS3-202ENST00000507001 OGFOD3Q6PK18 319 aa7.91□□□□□ -1.14
SPCS3-202ENST00000507001 DYMQ7RTS9 669 aa7.91□□□□□ -1.14
SPCS3-202ENST00000507001 WFDC3Q8IUB2 231 aa7.91□□□□□ -1.14
SPCS3-202ENST00000507001 BCL7CQ8WUZ0 217 aaPredicted RBP7.91□□□□□ -1.14
SPCS3-202ENST00000507001 MISP3Q96FF7 219 aa7.91□□□□□ -1.14
SPCS3-202ENST00000507001 CORO1BQ9BR76 489 aa7.91□□□□□ -1.14
SPCS3-202ENST00000507001 SLC5A6Q9Y289 635 aa7.91□□□□□ -1.14
SPCS3-202ENST00000507001 HDLBPQ00341 1268 aaKnown RBP7.9□□□□□ -1.14
SPCS3-202ENST00000507001 AKAP4Q5JQC9 854 aa7.9□□□□□ -1.14
SPCS3-202ENST00000507001 EPS8L3Q8TE67 593 aaKnown RBP7.9□□□□□ -1.14
SPCS3-202ENST00000507001 EHD4Q9H223 541 aa7.9□□□□□ -1.14
SPCS3-202ENST00000507001 LRRC4CQ9HCJ2 640 aa7.9□□□□□ -1.14
SPCS3-202ENST00000507001 RAD18Q9NS91 495 aa7.9□□□□□ -1.14
SPCS3-202ENST00000507001 AP4E1Q9UPM8 1137 aa7.9□□□□□ -1.14
SPCS3-202ENST00000507001 TRAK1Q9UPV9 953 aa7.9□□□□□ -1.14
SPCS3-202ENST00000507001 ITPKAP23677 461 aa7.89□□□□□ -1.15
SPCS3-202ENST00000507001 ASPAP45381 313 aa7.89□□□□□ -1.15
SPCS3-202ENST00000507001 PTPN12Q05209 780 aaKnown RBP7.89□□□□□ -1.15
SPCS3-202ENST00000507001 SPRED3Q2MJR0 410 aa7.89□□□□□ -1.15
SPCS3-202ENST00000507001 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.89□□□□□ -1.15
SPCS3-202ENST00000507001 TMEM87AQ8NBN3 555 aa7.89□□□□□ -1.15
SPCS3-202ENST00000507001 FRMD6Q96NE9 622 aa7.89□□□□□ -1.15
SPCS3-202ENST00000507001 ZNF576Q9H609 170 aa7.89□□□□□ -1.15
SPCS3-202ENST00000507001 BIN1O00499 593 aa7.88□□□□□ -1.15
SPCS3-202ENST00000507001 SCAMP3O14828 347 aaKnown RBP7.88□□□□□ -1.15
SPCS3-202ENST00000507001 GIPC1O14908 333 aa7.88□□□□□ -1.15
SPCS3-202ENST00000507001 CYP27C1Q4G0S4 372 aa7.88□□□□□ -1.15
SPCS3-202ENST00000507001 PPP4R2Q9NY27 417 aa7.88□□□□□ -1.15
SPCS3-202ENST00000507001 SPG7Q9UQ90 795 aa7.88□□□□□ -1.15
SPCS3-202ENST00000507001 AOC2O75106 756 aa7.87□□□□□ -1.15
SPCS3-202ENST00000507001 CTSHP09668 335 aa7.87□□□□□ -1.15
SPCS3-202ENST00000507001 AP3B2Q13367 1082 aa7.87□□□□□ -1.15
SPCS3-202ENST00000507001 GRM2Q14416 872 aa7.87□□□□□ -1.15
SPCS3-202ENST00000507001 PRPF40BQ6NWY9 871 aaKnown RBP7.87□□□□□ -1.15
SPCS3-202ENST00000507001 WDR18Q9BV38 432 aa7.87□□□□□ -1.15
SPCS3-202ENST00000507001 DYNC1LI2O43237 492 aaPredicted RBP7.86□□□□□ -1.15
SPCS3-202ENST00000507001 ECEL1O95672 775 aa7.86□□□□□ -1.15
SPCS3-202ENST00000507001 ERCC5P28715 1186 aaPredicted RBP7.86□□□□□ -1.15
SPCS3-202ENST00000507001 ZNF792Q3KQV3 632 aa7.86□□□□□ -1.15
SPCS3-202ENST00000507001 SRCIN1Q9C0H9 1055 aa7.86□□□□□ -1.15
SPCS3-202ENST00000507001 USP35Q9P2H5 1018 aa7.86□□□□□ -1.15
SPCS3-202ENST00000507001 AK5Q9Y6K8 562 aa7.86□□□□□ -1.15
SPCS3-202ENST00000507001 FANCCQ00597 558 aa7.85□□□□□ -1.15
SPCS3-202ENST00000507001 PLCL1Q15111 1095 aa7.85□□□□□ -1.15
SPCS3-202ENST00000507001 RPS26P11Q5JNZ5 115 aaPredicted RBP7.85□□□□□ -1.15
SPCS3-202ENST00000507001 BCO2Q9BYV7 579 aa7.85□□□□□ -1.15
SPCS3-202ENST00000507001 OSBPL7Q9BZF2 842 aa7.85□□□□□ -1.15
SPCS3-202ENST00000507001 DAGLAQ9Y4D2 1042 aa7.85□□□□□ -1.15
SPCS3-202ENST00000507001 TMEM238LA0A1B0GVL6 79 aa7.84□□□□□ -1.15
SPCS3-202ENST00000507001 XRCC5P13010 732 aaKnown RBP7.84□□□□□ -1.15
SPCS3-202ENST00000507001 EIF4BP23588 611 aaKnown RBP7.84□□□□□ -1.15
SPCS3-202ENST00000507001 RAD51AP2Q09MP3 1159 aa7.84□□□□□ -1.15
SPCS3-202ENST00000507001 SPRED2Q7Z698 418 aa7.84□□□□□ -1.15
SPCS3-202ENST00000507001 ATG4DQ86TL0 474 aaPredicted RBP7.84□□□□□ -1.15
SPCS3-202ENST00000507001 METTL16Q86W50 562 aaKnown RBP7.84□□□□□ -1.15
SPCS3-202ENST00000507001 GLIS3Q8NEA6 775 aa7.84□□□□□ -1.15
SPCS3-202ENST00000507001 NETO1Q8TDF5 533 aa7.84□□□□□ -1.15
SPCS3-202ENST00000507001 CRELD1Q96HD1 420 aa7.84□□□□□ -1.15
SPCS3-202ENST00000507001 MKNK2Q9HBH9 465 aa7.84□□□□□ -1.15
SPCS3-202ENST00000507001 ABCB6Q9NP58 842 aa7.84□□□□□ -1.15
SPCS3-202ENST00000507001 PPP1R9AQ9ULJ8 1098 aa7.84□□□□□ -1.15
SPCS3-202ENST00000507001 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.84□□□□□ -1.15
SPCS3-202ENST00000507001 TMPRSS2O15393 492 aa7.83□□□□□ -1.16
SPCS3-202ENST00000507001 FUT4P22083 530 aa7.83□□□□□ -1.16
SPCS3-202ENST00000507001 ITGAEP38570 1179 aa7.83□□□□□ -1.16
SPCS3-202ENST00000507001 PDE3AQ14432 1141 aa7.83□□□□□ -1.16
SPCS3-202ENST00000507001 ZNF574Q6ZN55 896 aaPredicted RBP7.83□□□□□ -1.16
SPCS3-202ENST00000507001 NT5DC4Q86YG4 428 aa7.83□□□□□ -1.16
SPCS3-202ENST00000507001 C12orf49Q9H741 205 aa7.83□□□□□ -1.16
SPCS3-202ENST00000507001 CRIM1Q9NZV1 1036 aa7.83□□□□□ -1.16
SPCS3-202ENST00000507001 ZNF76P36508 570 aa7.82□□□□□ -1.16
SPCS3-202ENST00000507001 ZC3H6P61129 1189 aaKnown RBP7.82□□□□□ -1.16
SPCS3-202ENST00000507001 HNRNPUQ00839 825 aaKnown RBP eCLIP7.82□□□□□ -1.16
SPCS3-202ENST00000507001 CARMIL2Q6F5E8 1435 aa7.82□□□□□ -1.16
SPCS3-202ENST00000507001 NXPE4Q6UWF7 544 aa7.82□□□□□ -1.16
SPCS3-202ENST00000507001 ATXN3LQ9H3M9 355 aa7.82□□□□□ -1.16
SPCS3-202ENST00000507001 VAV3Q9UKW4 847 aa7.82□□□□□ -1.16
SPCS3-202ENST00000507001 GSTT1P30711 240 aa7.81□□□□□ -1.16
SPCS3-202ENST00000507001 NAALADL2Q58DX5 795 aa7.81□□□□□ -1.16
SPCS3-202ENST00000507001 MEI1Q5TIA1 1274 aa7.81□□□□□ -1.16
SPCS3-202ENST00000507001 DTHD1Q6ZMT9 781 aa7.81□□□□□ -1.16
SPCS3-202ENST00000507001 RNF34Q969K3 372 aa7.81□□□□□ -1.16
SPCS3-202ENST00000507001 C8orf37Q96NL8 207 aa7.81□□□□□ -1.16
SPCS3-202ENST00000507001 KRT82Q9NSB4 513 aa7.81□□□□□ -1.16
SPCS3-202ENST00000507001 USP17L7P0C7H9 530 aa7.8□□□□□ -1.16
SPCS3-202ENST00000507001 FCGRTP55899 365 aa7.8□□□□□ -1.16
SPCS3-202ENST00000507001 PRKCQQ04759 706 aa7.8□□□□□ -1.16
SPCS3-202ENST00000507001 KRTAP4-9Q9BYQ8 210 aa7.8□□□□□ -1.16
SPCS3-202ENST00000507001 METTL5Q9NRN9 209 aaKnown RBP7.8□□□□□ -1.16
SPCS3-202ENST00000507001 FAM8A1Q9UBU6 413 aa7.8□□□□□ -1.16
SPCS3-202ENST00000507001 SLFN14P0C7P3 912 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms