RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 HTATIP2Q9BUP3 242 aa9.14□□□□□ -0.95
VCAN-206ENST00000505615 STXBP5LQ9Y2K9 1186 aa9.14□□□□□ -0.95
VCAN-206ENST00000505615 PCDHAC2Q9Y5I4 1007 aa9.14□□□□□ -0.95
VCAN-206ENST00000505615 PPP2R3BQ9Y5P8 575 aa9.14□□□□□ -0.95
VCAN-206ENST00000505615 MUC3AQ02505 3323 aa9.13□□□□□ -0.95
VCAN-206ENST00000505615 CTGFP29279 349 aa9.13□□□□□ -0.95
VCAN-206ENST00000505615 IREB2P48200 963 aaKnown RBP9.13□□□□□ -0.95
VCAN-206ENST00000505615 Q7L0L9 218 aa9.13□□□□□ -0.95
VCAN-206ENST00000505615 ANKRD13AQ8IZ07 590 aa9.13□□□□□ -0.95
VCAN-206ENST00000505615 DEFB123Q8N688 67 aa9.13□□□□□ -0.95
VCAN-206ENST00000505615 ZBTB38Q8NAP3 1195 aaPredicted RBP9.13□□□□□ -0.95
VCAN-206ENST00000505615 MTMR14Q8NCE2 650 aa9.13□□□□□ -0.95
VCAN-206ENST00000505615 OPTNQ96CV9 577 aa9.13□□□□□ -0.95
VCAN-206ENST00000505615 COA1Q9GZY4 146 aa9.13□□□□□ -0.95
VCAN-206ENST00000505615 ZFYVE28Q9HCC9 887 aa9.13□□□□□ -0.95
VCAN-206ENST00000505615 NR2E3Q9Y5X4 410 aa9.13□□□□□ -0.95
VCAN-206ENST00000505615 CCL15-CCL14A0A0B4J2E2 113 aa9.12□□□□□ -0.95
VCAN-206ENST00000505615 FARP2O94887 1054 aaPredicted RBP9.12□□□□□ -0.95
VCAN-206ENST00000505615 GJB1P08034 283 aa9.12□□□□□ -0.95
VCAN-206ENST00000505615 KLRK1P26718 216 aa9.12□□□□□ -0.95
VCAN-206ENST00000505615 CCL15Q16663 113 aa9.12□□□□□ -0.95
VCAN-206ENST00000505615 CCDC152Q4G0S7 254 aa9.12□□□□□ -0.95
VCAN-206ENST00000505615 TTLL5Q6EMB2 1281 aa9.12□□□□□ -0.95
VCAN-206ENST00000505615 ANKRD18AQ8IVF6 992 aa9.12□□□□□ -0.95
VCAN-206ENST00000505615 CERS5Q8N5B7 392 aa9.12□□□□□ -0.95
VCAN-206ENST00000505615 CCDC85AQ96PX6 553 aaPredicted RBP9.12□□□□□ -0.95
VCAN-206ENST00000505615 ELP3Q9H9T3 547 aa9.12□□□□□ -0.95
VCAN-206ENST00000505615 BABAM1Q9NWV8 329 aa9.12□□□□□ -0.95
VCAN-206ENST00000505615 MTMR10Q9NXD2 777 aa9.12□□□□□ -0.95
VCAN-206ENST00000505615 STAP2Q9UGK3 403 aa9.12□□□□□ -0.95
VCAN-206ENST00000505615 CLRN2A0PK11 232 aa9.11□□□□□ -0.95
VCAN-206ENST00000505615 TNFRSF10AO00220 468 aa9.11□□□□□ -0.95
VCAN-206ENST00000505615 TLR2O60603 784 aa9.11□□□□□ -0.95
VCAN-206ENST00000505615 NR1I2O75469 434 aa9.11□□□□□ -0.95
VCAN-206ENST00000505615 PCCAP05165 728 aaPredicted RBP9.11□□□□□ -0.95
VCAN-206ENST00000505615 CCL5P13501 91 aa9.11□□□□□ -0.95
VCAN-206ENST00000505615 CCT4P50991 539 aaKnown RBP9.11□□□□□ -0.95
VCAN-206ENST00000505615 PRMT2P55345 433 aa9.11□□□□□ -0.95
VCAN-206ENST00000505615 DLGAP5Q15398 846 aa9.11□□□□□ -0.95
VCAN-206ENST00000505615 SUPT20HL1Q3ZLR7 823 aa9.11□□□□□ -0.95
VCAN-206ENST00000505615 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.11□□□□□ -0.95
VCAN-206ENST00000505615 GDF15Q99988 308 aa9.11□□□□□ -0.95
VCAN-206ENST00000505615 MINPP1Q9UNW1 487 aa9.11□□□□□ -0.95
VCAN-206ENST00000505615 FAM187AA6NFU0 413 aa9.1□□□□□ -0.95
VCAN-206ENST00000505615 PDE8AO60658 829 aa9.1□□□□□ -0.95
VCAN-206ENST00000505615 GNRH1P01148 92 aa9.1□□□□□ -0.95
VCAN-206ENST00000505615 GTF2A2P52657 109 aa9.1□□□□□ -0.95
VCAN-206ENST00000505615 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.1□□□□□ -0.95
VCAN-206ENST00000505615 JARID2Q92833 1246 aaPredicted RBP9.1□□□□□ -0.95
VCAN-206ENST00000505615 TRIM47Q96LD4 638 aa9.1□□□□□ -0.95
VCAN-206ENST00000505615 SLC6A16Q9GZN6 736 aa9.1□□□□□ -0.95
VCAN-206ENST00000505615 BSDC1Q9NW68 430 aaPredicted RBP9.1□□□□□ -0.95
VCAN-206ENST00000505615 SRRDQ9UH36 339 aa9.1□□□□□ -0.95
VCAN-206ENST00000505615 ADGRA2Q96PE1 1338 aa9.09□□□□□ -0.95
VCAN-206ENST00000505615 IRS2Q9Y4H2 1338 aa9.09□□□□□ -0.95
VCAN-206ENST00000505615 BTBD19C9JJ37 291 aa9.09□□□□□ -0.95
VCAN-206ENST00000505615 NEFMP07197 916 aa9.09□□□□□ -0.95
VCAN-206ENST00000505615 GRK4P32298 578 aa9.09□□□□□ -0.95
VCAN-206ENST00000505615 BMP8BP34820 402 aa9.09□□□□□ -0.95
VCAN-206ENST00000505615 GTF2IP78347 998 aa9.09□□□□□ -0.95
VCAN-206ENST00000505615 VGLL4Q14135 290 aa9.09□□□□□ -0.95
VCAN-206ENST00000505615 RASA3Q14644 834 aa9.09□□□□□ -0.95
VCAN-206ENST00000505615 KIF22Q14807 665 aa9.09□□□□□ -0.95
VCAN-206ENST00000505615 CFAP100Q494V2 611 aa9.09□□□□□ -0.95
VCAN-206ENST00000505615 LCE2AQ5TA79 106 aaPredicted RBP9.09□□□□□ -0.95
VCAN-206ENST00000505615 HDGFL1Q5TGJ6 251 aa9.09□□□□□ -0.95
VCAN-206ENST00000505615 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.09□□□□□ -0.95
VCAN-206ENST00000505615 PXYLP1Q8TE99 480 aa9.09□□□□□ -0.95
VCAN-206ENST00000505615 U2AF1L4Q8WU68 220 aaKnown RBP9.09□□□□□ -0.95
VCAN-206ENST00000505615 PRMT6Q96LA8 375 aaPredicted RBP9.09□□□□□ -0.95
VCAN-206ENST00000505615 TEPSINQ96N21 525 aa9.09□□□□□ -0.95
VCAN-206ENST00000505615 ZCCHC17Q9NP64 241 aaKnown RBP9.09□□□□□ -0.95
VCAN-206ENST00000505615 RIPOR2Q9Y4F9 1068 aa9.09□□□□□ -0.95
VCAN-206ENST00000505615 HOXB7P09629 217 aa9.08□□□□□ -0.96
VCAN-206ENST00000505615 HSP90B1P14625 803 aaKnown RBP9.08□□□□□ -0.96
VCAN-206ENST00000505615 CTSWP56202 376 aa9.08□□□□□ -0.96
VCAN-206ENST00000505615 LRIT3Q3SXY7 679 aa9.08□□□□□ -0.96
VCAN-206ENST00000505615 C17orf99Q6UX52 265 aa9.08□□□□□ -0.96
VCAN-206ENST00000505615 SCUBE3Q8IX30 993 aa9.08□□□□□ -0.96
VCAN-206ENST00000505615 CDC5LQ99459 802 aaKnown RBP9.08□□□□□ -0.96
VCAN-206ENST00000505615 RNF208Q9H0X6 261 aa9.08□□□□□ -0.96
VCAN-206ENST00000505615 UNC93B1Q9H1C4 597 aa9.08□□□□□ -0.96
VCAN-206ENST00000505615 VEZTQ9HBM0 779 aa9.08□□□□□ -0.96
VCAN-206ENST00000505615 PRDM6Q9NQX0 595 aa9.08□□□□□ -0.96
VCAN-206ENST00000505615 PKD2L1Q9P0L9 805 aa9.08□□□□□ -0.96
VCAN-206ENST00000505615 DBF4Q9UBU7 674 aaPredicted RBP9.08□□□□□ -0.96
VCAN-206ENST00000505615 CDH23Q9H251 3354 aa9.08□□□□□ -0.96
VCAN-206ENST00000505615 SPDYE5A6NIY4 337 aa9.07□□□□□ -0.96
VCAN-206ENST00000505615 CHL1O00533 1208 aa9.07□□□□□ -0.96
VCAN-206ENST00000505615 PSMC4P43686 418 aa9.07□□□□□ -0.96
VCAN-206ENST00000505615 CCDC191Q8NCU4 936 aa9.07□□□□□ -0.96
VCAN-206ENST00000505615 GREM2Q9H772 168 aa9.07□□□□□ -0.96
VCAN-206ENST00000505615 CD209Q9NNX6 404 aa9.07□□□□□ -0.96
VCAN-206ENST00000505615 AAASQ9NRG9 546 aa9.07□□□□□ -0.96
VCAN-206ENST00000505615 HYPKQ9NX55 129 aa9.07□□□□□ -0.96
VCAN-206ENST00000505615 LEMD3Q9Y2U8 911 aa9.07□□□□□ -0.96
VCAN-206ENST00000505615 MYPNQ86TC9 1320 aa9.06□□□□□ -0.96
VCAN-206ENST00000505615 MAPK8IP3Q9UPT6 1336 aa9.06□□□□□ -0.96
VCAN-206ENST00000505615 DDX60LQ5H9U9 1706 aaKnown RBP9.06□□□□□ -0.96
VCAN-206ENST00000505615 PTPRFP10586 1907 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms