RNA–Protein interactions for RNA: ENST00000505423.1

AP3S1-203, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 611 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-203ENST00000505423 RC3H2Q9HBD1 1191 aaKnown RBP6.18□□□□□ -1.42
AP3S1-203ENST00000505423 BIN2Q9UBW5 565 aaPredicted RBP6.18□□□□□ -1.42
AP3S1-203ENST00000505423 PDS5BQ9NTI5 1447 aa6.17□□□□□ -1.42
AP3S1-203ENST00000505423 FANCD2Q9BXW9 1451 aa6.17□□□□□ -1.42
AP3S1-203ENST00000505423 DBX1A6NMT0 343 aa6.17□□□□□ -1.42
AP3S1-203ENST00000505423 FARP2O94887 1054 aaPredicted RBP6.17□□□□□ -1.42
AP3S1-203ENST00000505423 DSC3Q14574 896 aa6.17□□□□□ -1.42
AP3S1-203ENST00000505423 SEZ6L2Q6UXD5 910 aa6.17□□□□□ -1.42
AP3S1-203ENST00000505423 ARHGAP27Q6ZUM4 889 aa6.17□□□□□ -1.42
AP3S1-203ENST00000505423 KSR1Q8IVT5 923 aa6.17□□□□□ -1.42
AP3S1-203ENST00000505423 FAM168AQ92567 244 aa6.17□□□□□ -1.42
AP3S1-203ENST00000505423 DMRTB1Q96MA1 342 aa6.17□□□□□ -1.42
AP3S1-203ENST00000505423 TCF12Q99081 682 aa6.17□□□□□ -1.42
AP3S1-203ENST00000505423 DNMBPQ6XZF7 1577 aa6.17□□□□□ -1.42
AP3S1-203ENST00000505423 B3GALT4O96024 378 aa6.16□□□□□ -1.42
AP3S1-203ENST00000505423 FAM87AP0C7U9 286 aa6.16□□□□□ -1.42
AP3S1-203ENST00000505423 CDK5R2Q13319 367 aa6.16□□□□□ -1.42
AP3S1-203ENST00000505423 ATG4DQ86TL0 474 aaPredicted RBP6.16□□□□□ -1.42
AP3S1-203ENST00000505423 GALNT12Q8IXK2 581 aa6.16□□□□□ -1.42
AP3S1-203ENST00000505423 PLD6Q8N2A8 252 aaKnown RBP6.16□□□□□ -1.42
AP3S1-203ENST00000505423 FAM181AQ8N9Y4 354 aa6.16□□□□□ -1.42
AP3S1-203ENST00000505423 NETO1Q8TDF5 533 aa6.16□□□□□ -1.42
AP3S1-203ENST00000505423 TRIM56Q9BRZ2 755 aaKnown RBP6.16□□□□□ -1.42
AP3S1-203ENST00000505423 NIF3L1Q9GZT8 377 aa6.16□□□□□ -1.42
AP3S1-203ENST00000505423 GSX1Q9H4S2 264 aaPredicted RBP6.16□□□□□ -1.42
AP3S1-203ENST00000505423 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.16□□□□□ -1.42
AP3S1-203ENST00000505423 CARMIL2Q6F5E8 1435 aa6.16□□□□□ -1.42
AP3S1-203ENST00000505423 PRXQ9BXM0 1461 aa6.15□□□□□ -1.42
AP3S1-203ENST00000505423 EIF1AYO14602 144 aaKnown RBP6.15□□□□□ -1.42
AP3S1-203ENST00000505423 TREHO43280 583 aa6.15□□□□□ -1.42
AP3S1-203ENST00000505423 CD8BP10966 210 aa6.15□□□□□ -1.42
AP3S1-203ENST00000505423 SND1Q7KZF4 910 aaKnown RBP eCLIP6.15□□□□□ -1.42
AP3S1-203ENST00000505423 PI4K2BQ8TCG2 481 aa6.15□□□□□ -1.42
AP3S1-203ENST00000505423 SLC38A3Q99624 504 aa6.15□□□□□ -1.42
AP3S1-203ENST00000505423 WDR18Q9BV38 432 aa6.15□□□□□ -1.42
AP3S1-203ENST00000505423 DNAJC25Q9H1X3 360 aa6.15□□□□□ -1.42
AP3S1-203ENST00000505423 EHD4Q9H223 541 aa6.15□□□□□ -1.42
AP3S1-203ENST00000505423 PPP1R9AQ9ULJ8 1098 aa6.15□□□□□ -1.42
AP3S1-203ENST00000505423 VPS8Q8N3P4 1428 aa6.15□□□□□ -1.43
AP3S1-203ENST00000505423 RAPGEF2Q9Y4G8 1499 aa6.15□□□□□ -1.43
AP3S1-203ENST00000505423 CUL7Q14999 1698 aa6.14□□□□□ -1.43
AP3S1-203ENST00000505423 CPNE3O75131 537 aaKnown RBP6.14□□□□□ -1.43
AP3S1-203ENST00000505423 NEFLP07196 543 aa6.14□□□□□ -1.43
AP3S1-203ENST00000505423 FUT4P22083 530 aa6.14□□□□□ -1.43
AP3S1-203ENST00000505423 MAPK1P28482 360 aa6.14□□□□□ -1.43
AP3S1-203ENST00000505423 AP3B2Q13367 1082 aa6.14□□□□□ -1.43
AP3S1-203ENST00000505423 ASB16Q96NS5 453 aa6.14□□□□□ -1.43
AP3S1-203ENST00000505423 ZNF576Q9H609 170 aa6.14□□□□□ -1.43
AP3S1-203ENST00000505423 CUX2O14529 1486 aa6.14□□□□□ -1.43
AP3S1-203ENST00000505423 FGD5Q6ZNL6 1462 aa6.14□□□□□ -1.43
AP3S1-203ENST00000505423 RNASE1P07998 156 aaKnown RBP6.13□□□□□ -1.43
AP3S1-203ENST00000505423 SLFN14P0C7P3 912 aa6.13□□□□□ -1.43
AP3S1-203ENST00000505423 LIG1P18858 919 aa6.13□□□□□ -1.43
AP3S1-203ENST00000505423 HNRNPUQ00839 825 aaKnown RBP eCLIP6.13□□□□□ -1.43
AP3S1-203ENST00000505423 KIAA0319Q5VV43 1072 aa6.13□□□□□ -1.43
AP3S1-203ENST00000505423 WFDC3Q8IUB2 231 aa6.13□□□□□ -1.43
AP3S1-203ENST00000505423 GLIS3Q8NEA6 775 aa6.13□□□□□ -1.43
AP3S1-203ENST00000505423 TMC1Q8TDI8 760 aa6.13□□□□□ -1.43
AP3S1-203ENST00000505423 TMEM40Q8WWA1 233 aa6.13□□□□□ -1.43
AP3S1-203ENST00000505423 CSRNP1Q96S65 589 aa6.13□□□□□ -1.43
AP3S1-203ENST00000505423 KRTAP4-9Q9BYQ8 210 aa6.13□□□□□ -1.43
AP3S1-203ENST00000505423 ZC3H12CQ9C0D7 883 aaKnown RBP6.13□□□□□ -1.43
AP3S1-203ENST00000505423 ATXN3LQ9H3M9 355 aa6.13□□□□□ -1.43
AP3S1-203ENST00000505423 VAV3Q9UKW4 847 aa6.13□□□□□ -1.43
AP3S1-203ENST00000505423 TMPRSS2O15393 492 aa6.12□□□□□ -1.43
AP3S1-203ENST00000505423 RNGTTO60942 597 aaKnown RBP6.12□□□□□ -1.43
AP3S1-203ENST00000505423 CD96P40200 585 aa6.12□□□□□ -1.43
AP3S1-203ENST00000505423 PRKCQQ04759 706 aa6.12□□□□□ -1.43
AP3S1-203ENST00000505423 FMR1Q06787 632 aaKnown RBP eCLIP6.12□□□□□ -1.43
AP3S1-203ENST00000505423 SMYD4Q8IYR2 804 aaPredicted RBP6.12□□□□□ -1.43
AP3S1-203ENST00000505423 MBNL3Q9NUK0 354 aaKnown RBP6.12□□□□□ -1.43
AP3S1-203ENST00000505423 CCDC9Q9Y3X0 531 aaKnown RBP6.12□□□□□ -1.43
AP3S1-203ENST00000505423 ABCA10Q8WWZ4 1543 aa6.11□□□□□ -1.43
AP3S1-203ENST00000505423 TOPBP1Q92547 1522 aa6.11□□□□□ -1.43
AP3S1-203ENST00000505423 CARMIL1Q5VZK9 1371 aa6.11□□□□□ -1.43
AP3S1-203ENST00000505423 ITPKAP23677 461 aa6.11□□□□□ -1.43
AP3S1-203ENST00000505423 ZNF157P51786 506 aaPredicted RBP6.11□□□□□ -1.43
AP3S1-203ENST00000505423 ID3Q02535 119 aa6.11□□□□□ -1.43
AP3S1-203ENST00000505423 ENOX2Q16206 610 aaKnown RBP6.11□□□□□ -1.43
AP3S1-203ENST00000505423 IFI16Q16666 785 aaKnown RBP6.11□□□□□ -1.43
AP3S1-203ENST00000505423 AOC3Q16853 763 aa6.11□□□□□ -1.43
AP3S1-203ENST00000505423 FBLN7Q53RD9 439 aa6.11□□□□□ -1.43
AP3S1-203ENST00000505423 LRRN4CLQ8ND94 238 aa6.11□□□□□ -1.43
AP3S1-203ENST00000505423 CCDC74AQ96AQ1 378 aa6.11□□□□□ -1.43
AP3S1-203ENST00000505423 HRASLS5Q96KN8 279 aa6.11□□□□□ -1.43
AP3S1-203ENST00000505423 SSU72Q9NP77 194 aaKnown RBP6.11□□□□□ -1.43
AP3S1-203ENST00000505423 NPHS2Q9NP85 383 aa6.11□□□□□ -1.43
AP3S1-203ENST00000505423 CRIM1Q9NZV1 1036 aa6.11□□□□□ -1.43
AP3S1-203ENST00000505423 ADAMTS6Q9UKP5 1117 aa6.11□□□□□ -1.43
AP3S1-203ENST00000505423 SYNGAP1Q96PV0 1343 aa6.1□□□□□ -1.43
AP3S1-203ENST00000505423 PLCB3Q01970 1234 aa6.1□□□□□ -1.43
AP3S1-203ENST00000505423 ANGEL2Q5VTE6 544 aaKnown RBP6.1□□□□□ -1.43
AP3S1-203ENST00000505423 WDR89Q96FK6 387 aaPredicted RBP6.1□□□□□ -1.43
AP3S1-203ENST00000505423 FANCD2OSQ96PS1 177 aa6.1□□□□□ -1.43
AP3S1-203ENST00000505423 CCDC86Q9H6F5 360 aaKnown RBP6.1□□□□□ -1.43
AP3S1-203ENST00000505423 CTTNBP2Q8WZ74 1663 aa6.1□□□□□ -1.43
AP3S1-203ENST00000505423 FHAD1B1AJZ9 1412 aa6.09□□□□□ -1.43
AP3S1-203ENST00000505423 LRRC10BA6NIK2 292 aa6.09□□□□□ -1.43
AP3S1-203ENST00000505423 GADD45BO75293 160 aaPredicted RBP6.09□□□□□ -1.43
AP3S1-203ENST00000505423 HCLS1P14317 486 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms