RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 PRR23BQ6ZRT6 265 aa6.79□□□□□ -1.32
SMN2-205ENST00000505346 DUSP23Q9BVJ7 150 aa6.79□□□□□ -1.32
SMN2-205ENST00000505346 U3KQE9 123 aa6.79□□□□□ -1.32
SMN2-205ENST00000505346 A0A1W2PP55 124 aa6.78□□□□□ -1.32
SMN2-205ENST00000505346 TMPRSS2O15393 492 aa6.78□□□□□ -1.32
SMN2-205ENST00000505346 LEFTY1O75610 366 aa6.78□□□□□ -1.32
SMN2-205ENST00000505346 POLR3DP05423 398 aaPredicted RBP6.78□□□□□ -1.32
SMN2-205ENST00000505346 GLI1P08151 1106 aa6.78□□□□□ -1.32
SMN2-205ENST00000505346 HNRNPUQ00839 825 aaKnown RBP eCLIP6.78□□□□□ -1.32
SMN2-205ENST00000505346 AMIGO3Q86WK7 504 aa6.78□□□□□ -1.32
SMN2-205ENST00000505346 FANCD2OSQ96PS1 177 aa6.78□□□□□ -1.32
SMN2-205ENST00000505346 TCF12Q99081 682 aa6.78□□□□□ -1.32
SMN2-205ENST00000505346 PCOLCE2Q9UKZ9 415 aa6.78□□□□□ -1.32
SMN2-205ENST00000505346 CTNND2Q9UQB3 1225 aa6.78□□□□□ -1.32
SMN2-205ENST00000505346 NEFLP07196 543 aa6.77□□□□□ -1.33
SMN2-205ENST00000505346 LIG1P18858 919 aa6.77□□□□□ -1.33
SMN2-205ENST00000505346 ID3Q02535 119 aa6.77□□□□□ -1.33
SMN2-205ENST00000505346 TMEM67Q5HYA8 995 aa6.77□□□□□ -1.33
SMN2-205ENST00000505346 B4GALNT3Q6L9W6 998 aa6.77□□□□□ -1.33
SMN2-205ENST00000505346 KRTAP9-3Q9BYQ3 159 aa6.77□□□□□ -1.33
SMN2-205ENST00000505346 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.76□□□□□ -1.33
SMN2-205ENST00000505346 ABL1P00519 1130 aa6.76□□□□□ -1.33
SMN2-205ENST00000505346 TMEM253P0C7T8 217 aa6.76□□□□□ -1.33
SMN2-205ENST00000505346 CTSWP56202 376 aa6.76□□□□□ -1.33
SMN2-205ENST00000505346 FYB2Q5VWT5 728 aa6.76□□□□□ -1.33
SMN2-205ENST00000505346 FBXO15Q8NCQ5 510 aaPredicted RBP6.76□□□□□ -1.33
SMN2-205ENST00000505346 TNKS2Q9H2K2 1166 aa6.76□□□□□ -1.33
SMN2-205ENST00000505346 SSU72Q9NP77 194 aaKnown RBP6.76□□□□□ -1.33
SMN2-205ENST00000505346 TTLL4Q14679 1199 aa6.75□□□□□ -1.33
SMN2-205ENST00000505346 C14orf37Q86TY3 774 aa6.75□□□□□ -1.33
SMN2-205ENST00000505346 WDR89Q96FK6 387 aaPredicted RBP6.75□□□□□ -1.33
SMN2-205ENST00000505346 KIRREL1Q96J84 757 aa6.75□□□□□ -1.33
SMN2-205ENST00000505346 DISC1Q9NRI5 854 aa6.75□□□□□ -1.33
SMN2-205ENST00000505346 NPIPB6E9PJ23 425 aa6.74□□□□□ -1.33
SMN2-205ENST00000505346 INHBBP09529 407 aa6.74□□□□□ -1.33
SMN2-205ENST00000505346 HCLS1P14317 486 aaPredicted RBP6.74□□□□□ -1.33
SMN2-205ENST00000505346 MTMR3Q13615 1198 aa6.74□□□□□ -1.33
SMN2-205ENST00000505346 CYFIP1Q7L576 1253 aa6.74□□□□□ -1.33
SMN2-205ENST00000505346 GALNT12Q8IXK2 581 aa6.74□□□□□ -1.33
SMN2-205ENST00000505346 ZC3H12CQ9C0D7 883 aaKnown RBP6.74□□□□□ -1.33
SMN2-205ENST00000505346 ZNF576Q9H609 170 aa6.74□□□□□ -1.33
SMN2-205ENST00000505346 CCDC86Q9H6F5 360 aaKnown RBP6.74□□□□□ -1.33
SMN2-205ENST00000505346 GTF2IRD1Q9UHL9 959 aa6.74□□□□□ -1.33
SMN2-205ENST00000505346 PDE4CQ08493 712 aa6.73□□□□□ -1.33
SMN2-205ENST00000505346 CIAPIN1Q6FI81 312 aa6.73□□□□□ -1.33
SMN2-205ENST00000505346 TOP6BLQ8N6T0 577 aa6.73□□□□□ -1.33
SMN2-205ENST00000505346 FZD6O60353 706 aa6.72□□□□□ -1.33
SMN2-205ENST00000505346 KRT1P04264 644 aa6.72□□□□□ -1.33
SMN2-205ENST00000505346 ITPKAP23677 461 aa6.72□□□□□ -1.33
SMN2-205ENST00000505346 PHLDB3Q6NSJ2 640 aa6.72□□□□□ -1.33
SMN2-205ENST00000505346 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.72□□□□□ -1.33
SMN2-205ENST00000505346 DIRC2Q96SL1 478 aa6.72□□□□□ -1.33
SMN2-205ENST00000505346 EGFL7Q9UHF1 273 aa6.72□□□□□ -1.33
SMN2-205ENST00000505346 USTQ9Y2C2 406 aa6.72□□□□□ -1.33
SMN2-205ENST00000505346 KCNA10Q16322 511 aa6.71□□□□□ -1.34
SMN2-205ENST00000505346 KIF4BQ2VIQ3 1234 aa6.71□□□□□ -1.34
SMN2-205ENST00000505346 KIAA0319Q5VV43 1072 aa6.71□□□□□ -1.34
SMN2-205ENST00000505346 ERICH6Q7L0X2 663 aa6.71□□□□□ -1.34
SMN2-205ENST00000505346 HEXIM2Q96MH2 286 aaKnown RBP6.71□□□□□ -1.34
SMN2-205ENST00000505346 EHD4Q9H223 541 aa6.71□□□□□ -1.34
SMN2-205ENST00000505346 NSUN3Q9H649 340 aaKnown RBP6.71□□□□□ -1.34
SMN2-205ENST00000505346 ANO2Q9NQ90 1003 aa6.71□□□□□ -1.34
SMN2-205ENST00000505346 CCDC87Q9NVE4 849 aa6.71□□□□□ -1.34
SMN2-205ENST00000505346 BRPF3Q9ULD4 1205 aa6.71□□□□□ -1.34
SMN2-205ENST00000505346 IGF2BP3O00425 579 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMN2-205ENST00000505346 ZNF862O60290 1169 aa6.7□□□□□ -1.34
SMN2-205ENST00000505346 ATG14Q6ZNE5 492 aa6.7□□□□□ -1.34
SMN2-205ENST00000505346 GJD3Q8N144 294 aa6.7□□□□□ -1.34
SMN2-205ENST00000505346 KRT82Q9NSB4 513 aa6.7□□□□□ -1.34
SMN2-205ENST00000505346 TCAF2A6NFQ2 919 aa6.69□□□□□ -1.34
SMN2-205ENST00000505346 ICMTO60725 284 aa6.69□□□□□ -1.34
SMN2-205ENST00000505346 PTPN12Q05209 780 aaKnown RBP6.69□□□□□ -1.34
SMN2-205ENST00000505346 SPACA3Q8IXA5 215 aa6.69□□□□□ -1.34
SMN2-205ENST00000505346 C1orf115Q9H7X2 142 aa6.69□□□□□ -1.34
SMN2-205ENST00000505346 GNAT3A8MTJ3 354 aa6.68□□□□□ -1.34
SMN2-205ENST00000505346 ZNF157P51786 506 aaPredicted RBP6.68□□□□□ -1.34
SMN2-205ENST00000505346 CLCN7P51798 805 aa6.68□□□□□ -1.34
SMN2-205ENST00000505346 PDE3BQ13370 1112 aa6.68□□□□□ -1.34
SMN2-205ENST00000505346 ZNF211Q13398 564 aaPredicted RBP6.68□□□□□ -1.34
SMN2-205ENST00000505346 RPS26P11Q5JNZ5 115 aaPredicted RBP6.68□□□□□ -1.34
SMN2-205ENST00000505346 GLYCTKQ8IVS8 523 aa6.68□□□□□ -1.34
SMN2-205ENST00000505346 RELTQ969Z4 430 aa6.68□□□□□ -1.34
SMN2-205ENST00000505346 ISL2Q96A47 359 aa6.68□□□□□ -1.34
SMN2-205ENST00000505346 CITED4Q96RK1 184 aa6.68□□□□□ -1.34
SMN2-205ENST00000505346 DCP1AQ9NPI6 582 aaPredicted RBP6.68□□□□□ -1.34
SMN2-205ENST00000505346 JAG2Q9Y219 1238 aa6.68□□□□□ -1.34
SMN2-205ENST00000505346 PCDHGC5Q9Y5F6 944 aa6.68□□□□□ -1.34
SMN2-205ENST00000505346 CARNS1A5YM72 827 aa6.67□□□□□ -1.34
SMN2-205ENST00000505346 NDUFB5O43674 189 aa6.67□□□□□ -1.34
SMN2-205ENST00000505346 GSTP1P09211 210 aaKnown RBP6.67□□□□□ -1.34
SMN2-205ENST00000505346 GDNFP39905 211 aa6.67□□□□□ -1.34
SMN2-205ENST00000505346 NKPD1Q17RQ9 610 aa6.67□□□□□ -1.34
SMN2-205ENST00000505346 CD320Q9NPF0 282 aa6.67□□□□□ -1.34
SMN2-205ENST00000505346 NUAK1O60285 661 aa6.66□□□□□ -1.34
SMN2-205ENST00000505346 HOXA5P20719 270 aa6.66□□□□□ -1.34
SMN2-205ENST00000505346 FAM214BQ7L5A3 538 aa6.66□□□□□ -1.34
SMN2-205ENST00000505346 RNF214Q8ND24 703 aa6.66□□□□□ -1.34
SMN2-205ENST00000505346 CCDC120Q96HB5 630 aa6.66□□□□□ -1.34
SMN2-205ENST00000505346 EPB41L4BQ9H329 900 aa6.66□□□□□ -1.34
SMN2-205ENST00000505346 CARS2Q9HA77 564 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms