RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 NUAK1O60285 661 aa6.19□□□□□ -1.42
RFC1-208ENST00000504849 SYN1P17600 705 aa6.19□□□□□ -1.42
RFC1-208ENST00000504849 GLDCP23378 1020 aa6.19□□□□□ -1.42
RFC1-208ENST00000504849 SKOR2Q2VWA4 1001 aaPredicted RBP6.19□□□□□ -1.42
RFC1-208ENST00000504849 TMEM67Q5HYA8 995 aa6.19□□□□□ -1.42
RFC1-208ENST00000504849 TRIM56Q9BRZ2 755 aaKnown RBP6.19□□□□□ -1.42
RFC1-208ENST00000504849 CUX2O14529 1486 aa6.19□□□□□ -1.42
RFC1-208ENST00000504849 HSP90B1P14625 803 aaKnown RBP6.18□□□□□ -1.42
RFC1-208ENST00000504849 ERCC3P19447 782 aa6.18□□□□□ -1.42
RFC1-208ENST00000504849 POU4F3Q15319 338 aa6.18□□□□□ -1.42
RFC1-208ENST00000504849 ZNF423Q2M1K9 1284 aa6.18□□□□□ -1.42
RFC1-208ENST00000504849 ASAP3Q8TDY4 903 aa6.18□□□□□ -1.42
RFC1-208ENST00000504849 WDR18Q9BV38 432 aa6.18□□□□□ -1.42
RFC1-208ENST00000504849 ADAMTS20P59510 1910 aa6.18□□□□□ -1.42
RFC1-208ENST00000504849 RBM47A0AV96 593 aaKnown RBP6.17□□□□□ -1.42
RFC1-208ENST00000504849 TCAF2A6NFQ2 919 aa6.17□□□□□ -1.42
RFC1-208ENST00000504849 TMEM88BA6NKF7 163 aa6.17□□□□□ -1.42
RFC1-208ENST00000504849 METTL12A8MUP2 240 aa6.17□□□□□ -1.42
RFC1-208ENST00000504849 AOC2O75106 756 aa6.17□□□□□ -1.42
RFC1-208ENST00000504849 IKZF1Q13422 519 aa6.17□□□□□ -1.42
RFC1-208ENST00000504849 KCNC2Q96PR1 638 aa6.17□□□□□ -1.42
RFC1-208ENST00000504849 DUSP23Q9BVJ7 150 aa6.17□□□□□ -1.42
RFC1-208ENST00000504849 RAD18Q9NS91 495 aa6.17□□□□□ -1.42
RFC1-208ENST00000504849 SNX11Q9Y5W9 270 aa6.17□□□□□ -1.42
RFC1-208ENST00000504849 ITIH2P19823 946 aa6.16□□□□□ -1.42
RFC1-208ENST00000504849 LMOD1P29536 600 aaPredicted RBP6.16□□□□□ -1.42
RFC1-208ENST00000504849 PUS7Q96PZ0 661 aaKnown RBP6.16□□□□□ -1.42
RFC1-208ENST00000504849 IRF2BPLQ9H1B7 796 aa6.16□□□□□ -1.42
RFC1-208ENST00000504849 IGSF5Q9NSI5 407 aa6.16□□□□□ -1.42
RFC1-208ENST00000504849 STIM2Q9P246 746 aa6.16□□□□□ -1.42
RFC1-208ENST00000504849 A6NHS1 94 aa6.15□□□□□ -1.42
RFC1-208ENST00000504849 EREGO14944 169 aa6.15□□□□□ -1.42
RFC1-208ENST00000504849 EIF4EBP3O60516 100 aaPredicted RBP6.15□□□□□ -1.42
RFC1-208ENST00000504849 CYP11A1P05108 521 aa6.15□□□□□ -1.42
RFC1-208ENST00000504849 NFIXQ14938 502 aa6.15□□□□□ -1.42
RFC1-208ENST00000504849 PEAR1Q5VY43 1037 aaPredicted RBP6.15□□□□□ -1.42
RFC1-208ENST00000504849 CYFIP1Q7L576 1253 aa6.15□□□□□ -1.42
RFC1-208ENST00000504849 FAM214BQ7L5A3 538 aa6.15□□□□□ -1.42
RFC1-208ENST00000504849 PRRT2Q7Z6L0 340 aaPredicted RBP6.15□□□□□ -1.42
RFC1-208ENST00000504849 ATCAYQ86WG3 371 aa6.15□□□□□ -1.42
RFC1-208ENST00000504849 ASB11Q8WXH4 323 aa6.15□□□□□ -1.42
RFC1-208ENST00000504849 HEXIM2Q96MH2 286 aaKnown RBP6.15□□□□□ -1.42
RFC1-208ENST00000504849 GGNBP2Q9H3C7 697 aa6.15□□□□□ -1.42
RFC1-208ENST00000504849 ZCCHC4Q9H5U6 513 aa6.15□□□□□ -1.42
RFC1-208ENST00000504849 USP35Q9P2H5 1018 aa6.15□□□□□ -1.42
RFC1-208ENST00000504849 SYNGAP1Q96PV0 1343 aa6.15□□□□□ -1.43
RFC1-208ENST00000504849 RB1CC1Q8TDY2 1594 aa6.14□□□□□ -1.43
RFC1-208ENST00000504849 TMPRSS2O15393 492 aa6.14□□□□□ -1.43
RFC1-208ENST00000504849 PRMT3O60678 531 aa6.14□□□□□ -1.43
RFC1-208ENST00000504849 BMP7P18075 431 aa6.14□□□□□ -1.43
RFC1-208ENST00000504849 PCDH1Q08174 1060 aa6.14□□□□□ -1.43
RFC1-208ENST00000504849 NAA30Q147X3 362 aaPredicted RBP6.14□□□□□ -1.43
RFC1-208ENST00000504849 HP1BP3Q5SSJ5 553 aaPredicted RBP6.14□□□□□ -1.43
RFC1-208ENST00000504849 SPACA3Q8IXA5 215 aa6.14□□□□□ -1.43
RFC1-208ENST00000504849 FAM200AQ8TCP9 573 aa6.14□□□□□ -1.43
RFC1-208ENST00000504849 LATS2Q9NRM7 1088 aa6.14□□□□□ -1.43
RFC1-208ENST00000504849 RTEL1Q9NZ71 1219 aa6.14□□□□□ -1.43
RFC1-208ENST00000504849 ELOAQ14241 798 aaKnown RBP6.13□□□□□ -1.43
RFC1-208ENST00000504849 CXorf38Q8TB03 319 aa6.13□□□□□ -1.43
RFC1-208ENST00000504849 EPB41L4BQ9H329 900 aa6.13□□□□□ -1.43
RFC1-208ENST00000504849 DCP1AQ9NPI6 582 aaPredicted RBP6.13□□□□□ -1.43
RFC1-208ENST00000504849 CARNS1A5YM72 827 aa6.12□□□□□ -1.43
RFC1-208ENST00000504849 UNCXA6NJT0 531 aa6.12□□□□□ -1.43
RFC1-208ENST00000504849 ARHGAP27Q6ZUM4 889 aa6.12□□□□□ -1.43
RFC1-208ENST00000504849 PMEPA1Q969W9 287 aa6.12□□□□□ -1.43
RFC1-208ENST00000504849 MKNK1Q9BUB5 465 aa6.12□□□□□ -1.43
RFC1-208ENST00000504849 CDK11BP21127 795 aaKnown RBP6.11□□□□□ -1.43
RFC1-208ENST00000504849 ABTB2Q8N961 1025 aa6.11□□□□□ -1.43
RFC1-208ENST00000504849 FANCD2OSQ96PS1 177 aa6.11□□□□□ -1.43
RFC1-208ENST00000504849 CDK11AQ9UQ88 783 aaPredicted RBP6.11□□□□□ -1.43
RFC1-208ENST00000504849 GDNFP39905 211 aa6.1□□□□□ -1.43
RFC1-208ENST00000504849 NKPD1Q17RQ9 610 aa6.1□□□□□ -1.43
RFC1-208ENST00000504849 TXNDC2Q86VQ3 553 aa6.1□□□□□ -1.43
RFC1-208ENST00000504849 SMYD4Q8IYR2 804 aaPredicted RBP6.1□□□□□ -1.43
RFC1-208ENST00000504849 WDR89Q96FK6 387 aaPredicted RBP6.1□□□□□ -1.43
RFC1-208ENST00000504849 CLEC4MQ9H2X3 399 aaPredicted RBP6.1□□□□□ -1.43
RFC1-208ENST00000504849 TRIM13O60858 407 aa6.09□□□□□ -1.43
RFC1-208ENST00000504849 ADRB1P08588 477 aa6.09□□□□□ -1.43
RFC1-208ENST00000504849 SRFP11831 508 aa6.09□□□□□ -1.43
RFC1-208ENST00000504849 EDN3P14138 238 aa6.09□□□□□ -1.43
RFC1-208ENST00000504849 FAM69CQ0P6D2 419 aa6.09□□□□□ -1.43
RFC1-208ENST00000504849 MARCH10Q8NA82 808 aaPredicted RBP6.09□□□□□ -1.43
RFC1-208ENST00000504849 CORO1BQ9BR76 489 aa6.09□□□□□ -1.43
RFC1-208ENST00000504849 ZFYVE1Q9HBF4 777 aa6.09□□□□□ -1.43
RFC1-208ENST00000504849 DISC1Q9NRI5 854 aa6.09□□□□□ -1.43
RFC1-208ENST00000504849 CC2D2AQ9P2K1 1620 aa6.09□□□□□ -1.43
RFC1-208ENST00000504849 CNTNAP4Q9C0A0 1308 aa6.08□□□□□ -1.44
RFC1-208ENST00000504849 SWI5Q1ZZU3 235 aa6.08□□□□□ -1.44
RFC1-208ENST00000504849 TOP6BLQ8N6T0 577 aa6.08□□□□□ -1.44
RFC1-208ENST00000504849 EDEM1Q92611 657 aa6.08□□□□□ -1.44
RFC1-208ENST00000504849 PCDHGC5Q9Y5F6 944 aa6.08□□□□□ -1.44
RFC1-208ENST00000504849 A0A096LPE4 126 aa6.07□□□□□ -1.44
RFC1-208ENST00000504849 A0A1W2PPZ6 126 aa6.07□□□□□ -1.44
RFC1-208ENST00000504849 PDGFAP04085 211 aa6.07□□□□□ -1.44
RFC1-208ENST00000504849 RPLP1P05386 114 aaKnown RBP6.07□□□□□ -1.44
RFC1-208ENST00000504849 SPRED3Q2MJR0 410 aa6.07□□□□□ -1.44
RFC1-208ENST00000504849 DNAJC14Q6Y2X3 702 aaPredicted RBP6.07□□□□□ -1.44
RFC1-208ENST00000504849 KCNN1Q92952 543 aa6.07□□□□□ -1.44
RFC1-208ENST00000504849 XYLT2Q9H1B5 865 aa6.07□□□□□ -1.44
RFC1-208ENST00000504849 CARS2Q9HA77 564 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms