RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 IFNL1Q8IU54 200 aa21.8■■□□□ 1.08
NFKB1-204ENST00000504044 OTUD5Q96G74 571 aa21.8■■□□□ 1.08
NFKB1-204ENST00000504044 GPATCH3Q96I76 525 aa21.8■■□□□ 1.08
NFKB1-204ENST00000504044 ZBTB47Q9UFB7 747 aaPredicted RBP21.8■■□□□ 1.08
NFKB1-204ENST00000504044 RFX7Q2KHR2 1363 aa21.79■■□□□ 1.08
NFKB1-204ENST00000504044 PPP4CP60510 307 aa21.79■■□□□ 1.08
NFKB1-204ENST00000504044 AAMPQ13685 434 aa21.79■■□□□ 1.08
NFKB1-204ENST00000504044 PIH1D3Q9NQM4 214 aaKnown RBP21.79■■□□□ 1.08
NFKB1-204ENST00000504044 AATFQ9NY61 560 aaKnown RBP eCLIP21.79■■□□□ 1.08
NFKB1-204ENST00000504044 CYP7A1P22680 504 aa21.78■■□□□ 1.08
NFKB1-204ENST00000504044 PPATQ06203 517 aa21.78■■□□□ 1.08
NFKB1-204ENST00000504044 NOM1Q5C9Z4 860 aaKnown RBP21.78■■□□□ 1.08
NFKB1-204ENST00000504044 ZNF384Q8TF68 577 aa21.78■■□□□ 1.08
NFKB1-204ENST00000504044 ZKSCAN4Q969J2 545 aaPredicted RBP21.78■■□□□ 1.08
NFKB1-204ENST00000504044 CFHR5Q9BXR6 569 aa21.78■■□□□ 1.08
NFKB1-204ENST00000504044 DHX36Q9H2U1 1008 aaKnown RBP21.78■■□□□ 1.08
NFKB1-204ENST00000504044 ZNF112Q9UJU3 913 aa21.78■■□□□ 1.08
NFKB1-204ENST00000504044 SNCAIPQ9Y6H5 919 aa21.78■■□□□ 1.08
NFKB1-204ENST00000504044 PCNTO95613 3336 aa21.77■■□□□ 1.08
NFKB1-204ENST00000504044 CETPP11597 493 aa21.77■■□□□ 1.08
NFKB1-204ENST00000504044 PPIL2Q13356 520 aa21.77■■□□□ 1.08
NFKB1-204ENST00000504044 SNAPC2Q13487 334 aa21.77■■□□□ 1.08
NFKB1-204ENST00000504044 NOL9Q5SY16 702 aaKnown RBP21.77■■□□□ 1.08
NFKB1-204ENST00000504044 DNAJC2Q99543 621 aaKnown RBP21.77■■□□□ 1.08
NFKB1-204ENST00000504044 OSBPL5Q9H0X9 879 aaPredicted RBP21.77■■□□□ 1.08
NFKB1-204ENST00000504044 DCTPP1Q9H773 170 aa21.77■■□□□ 1.08
NFKB1-204ENST00000504044 DDX4Q9NQI0 724 aaKnown RBP21.77■■□□□ 1.08
NFKB1-204ENST00000504044 PICK1Q9NRD5 415 aa21.77■■□□□ 1.08
NFKB1-204ENST00000504044 MYH2Q9UKX2 1941 aa21.76■■□□□ 1.07
NFKB1-204ENST00000504044 TESPA1A2RU30 521 aaPredicted RBP21.76■■□□□ 1.07
NFKB1-204ENST00000504044 TBC1D8O95759 1140 aa21.76■■□□□ 1.07
NFKB1-204ENST00000504044 ZFPM1Q8IX07 1006 aa21.76■■□□□ 1.07
NFKB1-204ENST00000504044 MAGEB6Q8N7X4 407 aa21.76■■□□□ 1.07
NFKB1-204ENST00000504044 TRIM34Q9BYJ4 488 aa21.76■■□□□ 1.07
NFKB1-204ENST00000504044 COL2A1P02458 1487 aaPredicted RBP21.76■■□□□ 1.07
NFKB1-204ENST00000504044 ATRNL1Q5VV63 1379 aa21.75■■□□□ 1.07
NFKB1-204ENST00000504044 CCL15-CCL14A0A0B4J2E2 113 aa21.75■■□□□ 1.07
NFKB1-204ENST00000504044 TBC1D12O60347 775 aa21.75■■□□□ 1.07
NFKB1-204ENST00000504044 ATP5JP18859 108 aa21.75■■□□□ 1.07
NFKB1-204ENST00000504044 INPP5BP32019 993 aa21.75■■□□□ 1.07
NFKB1-204ENST00000504044 GJA5P36382 358 aa21.75■■□□□ 1.07
NFKB1-204ENST00000504044 CCL15Q16663 113 aa21.75■■□□□ 1.07
NFKB1-204ENST00000504044 SH3RF3Q8TEJ3 882 aaPredicted RBP21.75■■□□□ 1.07
NFKB1-204ENST00000504044 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.75■■□□□ 1.07
NFKB1-204ENST00000504044 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.75■■□□□ 1.07
NFKB1-204ENST00000504044 DDTLA6NHG4 134 aaPredicted RBP21.74■■□□□ 1.07
NFKB1-204ENST00000504044 HLA-DOAP06340 250 aa21.74■■□□□ 1.07
NFKB1-204ENST00000504044 SCYL3Q8IZE3 742 aa21.74■■□□□ 1.07
NFKB1-204ENST00000504044 PI4KBQ9UBF8 816 aa21.74■■□□□ 1.07
NFKB1-204ENST00000504044 HERC5Q9UII4 1024 aaKnown RBP21.74■■□□□ 1.07
NFKB1-204ENST00000504044 GPR25O00155 361 aa21.73■■□□□ 1.07
NFKB1-204ENST00000504044 GOLIM4O00461 696 aa21.73■■□□□ 1.07
NFKB1-204ENST00000504044 CTNND1O60716 968 aaKnown RBP21.73■■□□□ 1.07
NFKB1-204ENST00000504044 USP5P45974 858 aa21.73■■□□□ 1.07
NFKB1-204ENST00000504044 MAP3K10Q02779 954 aa21.73■■□□□ 1.07
NFKB1-204ENST00000504044 TGFBRAP1Q8WUH2 860 aa21.73■■□□□ 1.07
NFKB1-204ENST00000504044 ANTXR1Q9H6X2 564 aa21.73■■□□□ 1.07
NFKB1-204ENST00000504044 ZCCHC17Q9NP64 241 aaKnown RBP21.73■■□□□ 1.07
NFKB1-204ENST00000504044 MAST2Q6P0Q8 1798 aa21.73■■□□□ 1.07
NFKB1-204ENST00000504044 AKAP11Q9UKA4 1901 aa21.72■■□□□ 1.07
NFKB1-204ENST00000504044 FKTNO75072 461 aa21.72■■□□□ 1.07
NFKB1-204ENST00000504044 DGKZQ13574 1117 aa21.72■■□□□ 1.07
NFKB1-204ENST00000504044 SLC9C2Q5TAH2 1124 aa21.72■■□□□ 1.07
NFKB1-204ENST00000504044 ZSCAN25Q6NSZ9 544 aa21.72■■□□□ 1.07
NFKB1-204ENST00000504044 SH3BP5LQ7L8J4 393 aa21.72■■□□□ 1.07
NFKB1-204ENST00000504044 MS4A4AQ96JQ5 239 aa21.72■■□□□ 1.07
NFKB1-204ENST00000504044 CRBNQ96SW2 442 aa21.72■■□□□ 1.07
NFKB1-204ENST00000504044 BOLA2Q9H3K6 86 aa21.72■■□□□ 1.07
NFKB1-204ENST00000504044 ECHDC1Q9NTX5 307 aa21.72■■□□□ 1.07
NFKB1-204ENST00000504044 PAG1Q9NWQ8 432 aa21.72■■□□□ 1.07
NFKB1-204ENST00000504044 NDUFB9Q9Y6M9 179 aa21.72■■□□□ 1.07
NFKB1-204ENST00000504044 IGF2BP3O00425 579 aaKnown RBP eCLIP21.71■■□□□ 1.07
NFKB1-204ENST00000504044 IRF6O14896 467 aa21.71■■□□□ 1.07
NFKB1-204ENST00000504044 CTU1Q7Z7A3 348 aaKnown RBP21.71■■□□□ 1.07
NFKB1-204ENST00000504044 CRACR2BQ8N4Y2 399 aaPredicted RBP21.71■■□□□ 1.07
NFKB1-204ENST00000504044 CNKSR2Q8WXI2 1034 aa21.71■■□□□ 1.07
NFKB1-204ENST00000504044 HAUS7Q99871 368 aa21.71■■□□□ 1.07
NFKB1-204ENST00000504044 ZFYVE28Q9HCC9 887 aa21.71■■□□□ 1.07
NFKB1-204ENST00000504044 FLT1P17948 1338 aa21.71■■□□□ 1.07
NFKB1-204ENST00000504044 MAGEB6P1A0A0J9YX57 407 aa21.7■■□□□ 1.06
NFKB1-204ENST00000504044 CXCL11O14625 94 aa21.7■■□□□ 1.06
NFKB1-204ENST00000504044 TAF1CQ15572 869 aaPredicted RBP21.7■■□□□ 1.06
NFKB1-204ENST00000504044 PKN2Q16513 984 aaKnown RBP21.7■■□□□ 1.06
NFKB1-204ENST00000504044 ADGRA1Q86SQ6 560 aa21.7■■□□□ 1.06
NFKB1-204ENST00000504044 MAPKAPK5Q8IW41 473 aa21.7■■□□□ 1.06
NFKB1-204ENST00000504044 MIGA1Q8NAN2 632 aa21.7■■□□□ 1.06
NFKB1-204ENST00000504044 ZNF296Q8WUU4 475 aaPredicted RBP21.7■■□□□ 1.06
NFKB1-204ENST00000504044 BRI3BPQ8WY22 251 aa21.7■■□□□ 1.06
NFKB1-204ENST00000504044 TBC1D2Q9BYX2 928 aa21.7■■□□□ 1.06
NFKB1-204ENST00000504044 PHF20L1A8MW92 1017 aa21.69■■□□□ 1.06
NFKB1-204ENST00000504044 SMARCA5O60264 1052 aaPredicted RBP21.69■■□□□ 1.06
NFKB1-204ENST00000504044 PDE6AP16499 860 aa21.69■■□□□ 1.06
NFKB1-204ENST00000504044 ARHGEF6Q15052 776 aa21.69■■□□□ 1.06
NFKB1-204ENST00000504044 FOXP4Q8IVH2 680 aaPredicted RBP21.69■■□□□ 1.06
NFKB1-204ENST00000504044 CRNKL1Q9BZJ0 848 aaKnown RBP21.69■■□□□ 1.06
NFKB1-204ENST00000504044 MCOLN1Q9GZU1 580 aa21.69■■□□□ 1.06
NFKB1-204ENST00000504044 PCDHB15Q9Y5E8 787 aa21.69■■□□□ 1.06
NFKB1-204ENST00000504044 ERC2O15083 957 aa21.68■■□□□ 1.06
NFKB1-204ENST00000504044 LRRFIP1Q32MZ4 808 aaKnown RBP21.68■■□□□ 1.06
NFKB1-204ENST00000504044 TTC6Q86TZ1 520 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms