RNA–Protein interactions for RNA: ENST00000504020.2

CCDC110-203, Transcript of coiled-coil domain containing 110, humanhuman

TSL 5

Gene CCDC110, Length 470 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-203ENST00000504020 SLC12A5Q9H2X9 1139 aa6.78□□□□□ -1.32
CCDC110-203ENST00000504020 SLC52A2Q9HAB3 445 aa6.78□□□□□ -1.32
CCDC110-203ENST00000504020 SPEGQ15772 3267 aa6.78□□□□□ -1.32
CCDC110-203ENST00000504020 NUP98P52948 1817 aa6.78□□□□□ -1.32
CCDC110-203ENST00000504020 ECM29Q5VYK3 1845 aa6.78□□□□□ -1.32
CCDC110-203ENST00000504020 RLFQ13129 1914 aa6.78□□□□□ -1.32
CCDC110-203ENST00000504020 BTBD19C9JJ37 291 aa6.77□□□□□ -1.33
CCDC110-203ENST00000504020 BBOX1O75936 387 aa6.77□□□□□ -1.33
CCDC110-203ENST00000504020 AMOTQ4VCS5 1084 aa6.77□□□□□ -1.33
CCDC110-203ENST00000504020 BMP8AQ7Z5Y6 402 aa6.77□□□□□ -1.33
CCDC110-203ENST00000504020 ADSSL1Q8N142 457 aa6.77□□□□□ -1.33
CCDC110-203ENST00000504020 ELP3Q9H9T3 547 aa6.77□□□□□ -1.33
CCDC110-203ENST00000504020 HMX1Q9NP08 348 aaPredicted RBP6.77□□□□□ -1.33
CCDC110-203ENST00000504020 ABCC4O15439 1325 aa6.76□□□□□ -1.33
CCDC110-203ENST00000504020 USP2O75604 605 aaPredicted RBP6.76□□□□□ -1.33
CCDC110-203ENST00000504020 IRS1P35568 1242 aa6.76□□□□□ -1.33
CCDC110-203ENST00000504020 C1orf141Q5JVX7 400 aa6.76□□□□□ -1.33
CCDC110-203ENST00000504020 TEX13AQ9BXU3 409 aaPredicted RBP6.76□□□□□ -1.33
CCDC110-203ENST00000504020 SMG1Q96Q15 3661 aaKnown RBP6.76□□□□□ -1.33
CCDC110-203ENST00000504020 FRYQ5TBA9 3013 aa6.76□□□□□ -1.33
CCDC110-203ENST00000504020 ZZEF1O43149 2961 aa6.75□□□□□ -1.33
CCDC110-203ENST00000504020 A1BGP04217 495 aa6.75□□□□□ -1.33
CCDC110-203ENST00000504020 CETPP11597 493 aa6.75□□□□□ -1.33
CCDC110-203ENST00000504020 POU3F3P20264 500 aaPredicted RBP6.75□□□□□ -1.33
CCDC110-203ENST00000504020 NBL1P41271 181 aa6.75□□□□□ -1.33
CCDC110-203ENST00000504020 CHAMP1Q96JM3 812 aa6.75□□□□□ -1.33
CCDC110-203ENST00000504020 FSD1Q9BTV5 496 aa6.75□□□□□ -1.33
CCDC110-203ENST00000504020 GAKO14976 1311 aa6.75□□□□□ -1.33
CCDC110-203ENST00000504020 COL4A1P02462 1669 aa6.74□□□□□ -1.33
CCDC110-203ENST00000504020 HMGCRP04035 888 aa6.74□□□□□ -1.33
CCDC110-203ENST00000504020 EPHB4P54760 987 aa6.74□□□□□ -1.33
CCDC110-203ENST00000504020 ZBED2Q9BTP6 218 aa6.74□□□□□ -1.33
CCDC110-203ENST00000504020 DEFB129Q9H1M3 183 aa6.74□□□□□ -1.33
CCDC110-203ENST00000504020 DLL3Q9NYJ7 618 aa6.74□□□□□ -1.33
CCDC110-203ENST00000504020 EMILIN1Q9Y6C2 1016 aa6.74□□□□□ -1.33
CCDC110-203ENST00000504020 BCRP11274 1271 aa6.73□□□□□ -1.33
CCDC110-203ENST00000504020 RTP1P59025 263 aa6.73□□□□□ -1.33
CCDC110-203ENST00000504020 SUPT20HL1Q3ZLR7 823 aa6.73□□□□□ -1.33
CCDC110-203ENST00000504020 CCDC129Q6ZRS4 1044 aa6.73□□□□□ -1.33
CCDC110-203ENST00000504020 SENP6Q9GZR1 1112 aaPredicted RBP6.73□□□□□ -1.33
CCDC110-203ENST00000504020 JAG2Q9Y219 1238 aa6.73□□□□□ -1.33
CCDC110-203ENST00000504020 PPP2R3BQ9Y5P8 575 aa6.73□□□□□ -1.33
CCDC110-203ENST00000504020 MTCH2Q9Y6C9 303 aa6.73□□□□□ -1.33
CCDC110-203ENST00000504020 COL4A3Q01955 1670 aa6.73□□□□□ -1.33
CCDC110-203ENST00000504020 KIF20BQ96Q89 1820 aa6.73□□□□□ -1.33
CCDC110-203ENST00000504020 IBTKQ9P2D0 1353 aaPredicted RBP6.72□□□□□ -1.33
CCDC110-203ENST00000504020 H0Y858 1186 aa6.72□□□□□ -1.33
CCDC110-203ENST00000504020 FYB1O15117 783 aa6.72□□□□□ -1.33
CCDC110-203ENST00000504020 TNNT2P45379 298 aaPredicted RBP6.72□□□□□ -1.33
CCDC110-203ENST00000504020 SUGP1Q8IWZ8 645 aaKnown RBP6.72□□□□□ -1.33
CCDC110-203ENST00000504020 EYA3Q99504 573 aa6.72□□□□□ -1.33
CCDC110-203ENST00000504020 PRDM5Q9NQX1 630 aaPredicted RBP6.72□□□□□ -1.33
CCDC110-203ENST00000504020 TLR9Q9NR96 1032 aa6.72□□□□□ -1.33
CCDC110-203ENST00000504020 POLLQ9UGP5 575 aa6.72□□□□□ -1.33
CCDC110-203ENST00000504020 KCNH4Q9UQ05 1017 aa6.72□□□□□ -1.33
CCDC110-203ENST00000504020 FRYLO94915 3013 aa6.72□□□□□ -1.33
CCDC110-203ENST00000504020 ANKRD17O75179 2603 aaKnown RBP6.72□□□□□ -1.33
CCDC110-203ENST00000504020 AOX1Q06278 1338 aa6.72□□□□□ -1.33
CCDC110-203ENST00000504020 HEG1Q9ULI3 1381 aa6.71□□□□□ -1.33
CCDC110-203ENST00000504020 PTPN13Q12923 2485 aa6.71□□□□□ -1.33
CCDC110-203ENST00000504020 TRIM43BA6NCK2 446 aa6.71□□□□□ -1.34
CCDC110-203ENST00000504020 GRXCR1A8MXD5 290 aa6.71□□□□□ -1.34
CCDC110-203ENST00000504020 TNPO2O14787 897 aaKnown RBP6.71□□□□□ -1.34
CCDC110-203ENST00000504020 KRT38O76015 456 aa6.71□□□□□ -1.34
CCDC110-203ENST00000504020 SASH1O94885 1247 aa6.71□□□□□ -1.34
CCDC110-203ENST00000504020 KCNC4Q03721 635 aa6.71□□□□□ -1.34
CCDC110-203ENST00000504020 TRIM32Q13049 653 aa6.71□□□□□ -1.34
CCDC110-203ENST00000504020 RAB30Q15771 203 aa6.71□□□□□ -1.34
CCDC110-203ENST00000504020 HLFQ16534 295 aa6.71□□□□□ -1.34
CCDC110-203ENST00000504020 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.71□□□□□ -1.34
CCDC110-203ENST00000504020 ZNF454Q8N9F8 522 aa6.71□□□□□ -1.34
CCDC110-203ENST00000504020 NKD2Q969F2 451 aaPredicted RBP6.71□□□□□ -1.34
CCDC110-203ENST00000504020 TRIM43Q96BQ3 446 aaPredicted RBP6.71□□□□□ -1.34
CCDC110-203ENST00000504020 NLRP3Q96P20 1036 aa6.71□□□□□ -1.34
CCDC110-203ENST00000504020 HNRNPABQ99729 332 aaKnown RBP6.71□□□□□ -1.34
CCDC110-203ENST00000504020 GGNBP2Q9H3C7 697 aa6.71□□□□□ -1.34
CCDC110-203ENST00000504020 MSRAQ9UJ68 235 aa6.71□□□□□ -1.34
CCDC110-203ENST00000504020 ATP11BQ9Y2G3 1177 aa6.71□□□□□ -1.34
CCDC110-203ENST00000504020 C6orf229H3BNL8 230 aa6.7□□□□□ -1.34
CCDC110-203ENST00000504020 NRG2O14511 850 aaPredicted RBP6.7□□□□□ -1.34
CCDC110-203ENST00000504020 GTPBP6O43824 516 aaPredicted RBP6.7□□□□□ -1.34
CCDC110-203ENST00000504020 SNAPC2Q13487 334 aa6.7□□□□□ -1.34
CCDC110-203ENST00000504020 NBPF12Q5TAG4 269 aaPredicted RBP6.7□□□□□ -1.34
CCDC110-203ENST00000504020 TMC4Q7Z404 712 aa6.7□□□□□ -1.34
CCDC110-203ENST00000504020 ANKRD23Q86SG2 305 aa6.7□□□□□ -1.34
CCDC110-203ENST00000504020 PLPP6Q8IY26 295 aa6.7□□□□□ -1.34
CCDC110-203ENST00000504020 OGFOD1Q8N543 542 aa6.7□□□□□ -1.34
CCDC110-203ENST00000504020 PBXIP1Q96AQ6 731 aa6.7□□□□□ -1.34
CCDC110-203ENST00000504020 SLC28A3Q9HAS3 691 aa6.7□□□□□ -1.34
CCDC110-203ENST00000504020 LGR6Q9HBX8 967 aa6.7□□□□□ -1.34
CCDC110-203ENST00000504020 PDLIM7Q9NR12 457 aa6.7□□□□□ -1.34
CCDC110-203ENST00000504020 STK24Q9Y6E0 443 aa6.7□□□□□ -1.34
CCDC110-203ENST00000504020 PLXNB2O15031 1838 aa6.69□□□□□ -1.34
CCDC110-203ENST00000504020 PDHXO00330 501 aa6.69□□□□□ -1.34
CCDC110-203ENST00000504020 TBC1D12O60347 775 aa6.69□□□□□ -1.34
CCDC110-203ENST00000504020 IL9P15248 144 aa6.69□□□□□ -1.34
CCDC110-203ENST00000504020 MMP14P50281 582 aa6.69□□□□□ -1.34
CCDC110-203ENST00000504020 VGLL4Q14135 290 aa6.69□□□□□ -1.34
CCDC110-203ENST00000504020 MAP3K21Q5TCX8 1036 aa6.69□□□□□ -1.34
CCDC110-203ENST00000504020 SH3RF1Q7Z6J0 888 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms