RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ADD1P35611 737 aaKnown RBP13.49□□□□□ -0.25
USP46-204ENST00000503060 GUCY1B3Q02153 619 aa13.49□□□□□ -0.25
USP46-204ENST00000503060 MYBPC2Q14324 1141 aa13.49□□□□□ -0.25
USP46-204ENST00000503060 RNF214Q8ND24 703 aa13.49□□□□□ -0.25
USP46-204ENST00000503060 KRT23Q9C075 422 aa13.49□□□□□ -0.25
USP46-204ENST00000503060 QTRT2Q9H974 415 aaKnown RBP13.49□□□□□ -0.25
USP46-204ENST00000503060 ORC3Q9UBD5 711 aaPredicted RBP13.49□□□□□ -0.25
USP46-204ENST00000503060 PDS5AQ29RF7 1337 aaKnown RBP13.48□□□□□ -0.25
USP46-204ENST00000503060 CACNA1SQ13698 1873 aa13.48□□□□□ -0.25
USP46-204ENST00000503060 GOLGA6L4A6NEF3 574 aa13.48□□□□□ -0.25
USP46-204ENST00000503060 LIG1P18858 919 aa13.48□□□□□ -0.25
USP46-204ENST00000503060 MFSD6Q6ZSS7 791 aa13.48□□□□□ -0.25
USP46-204ENST00000503060 SGMS1Q86VZ5 419 aa13.48□□□□□ -0.25
USP46-204ENST00000503060 STAG1Q8WVM7 1258 aa13.48□□□□□ -0.25
USP46-204ENST00000503060 LY9Q9HBG7 655 aa13.48□□□□□ -0.25
USP46-204ENST00000503060 SENP2Q9HC62 589 aa13.48□□□□□ -0.25
USP46-204ENST00000503060 CHD4Q14839 1912 aa13.48□□□□□ -0.25
USP46-204ENST00000503060 MYH15Q9Y2K3 1946 aa13.48□□□□□ -0.25
USP46-204ENST00000503060 HIBADHP31937 336 aaKnown RBP13.48□□□□□ -0.25
USP46-204ENST00000503060 METAP2P50579 478 aaKnown RBP eCLIP13.48□□□□□ -0.25
USP46-204ENST00000503060 TMEM67Q5HYA8 995 aa13.48□□□□□ -0.25
USP46-204ENST00000503060 APOA5Q6Q788 366 aa13.48□□□□□ -0.25
USP46-204ENST00000503060 IFNLR1Q8IU57 520 aaPredicted RBP13.48□□□□□ -0.25
USP46-204ENST00000503060 PGBD1Q96JS3 809 aa13.48□□□□□ -0.25
USP46-204ENST00000503060 RIOK1Q9BRS2 568 aaKnown RBP13.48□□□□□ -0.25
USP46-204ENST00000503060 TFCP2L1Q9NZI6 479 aa13.48□□□□□ -0.25
USP46-204ENST00000503060 ZSWIM5Q9P217 1185 aa13.48□□□□□ -0.25
USP46-204ENST00000503060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.47□□□□□ -0.25
USP46-204ENST00000503060 LIFRP42702 1097 aa13.47□□□□□ -0.25
USP46-204ENST00000503060 ATL3Q6DD88 541 aa13.47□□□□□ -0.25
USP46-204ENST00000503060 GIMAP6Q6P9H5 292 aa13.47□□□□□ -0.25
USP46-204ENST00000503060 EGFL6Q8IUX8 553 aa13.47□□□□□ -0.25
USP46-204ENST00000503060 CNBD1Q8NA66 436 aa13.47□□□□□ -0.25
USP46-204ENST00000503060 C8orf76Q96K31 380 aa13.47□□□□□ -0.25
USP46-204ENST00000503060 ZNF396Q96N95 335 aaPredicted RBP13.47□□□□□ -0.25
USP46-204ENST00000503060 NFXL1Q6ZNB6 911 aa13.47□□□□□ -0.25
USP46-204ENST00000503060 ILDR1Q86SU0 546 aaPredicted RBP13.47□□□□□ -0.25
USP46-204ENST00000503060 FUCA2Q9BTY2 467 aa13.47□□□□□ -0.25
USP46-204ENST00000503060 RCOR1Q9UKL0 485 aa13.47□□□□□ -0.25
USP46-204ENST00000503060 IFIT3O14879 490 aaKnown RBP13.46□□□□□ -0.25
USP46-204ENST00000503060 ZBTB43O43298 467 aa13.46□□□□□ -0.25
USP46-204ENST00000503060 PPARAQ07869 468 aa13.46□□□□□ -0.25
USP46-204ENST00000503060 GRAPQ13588 217 aa13.46□□□□□ -0.25
USP46-204ENST00000503060 CCDC96Q2M329 555 aa13.46□□□□□ -0.25
USP46-204ENST00000503060 FBXO18Q8NFZ0 1043 aa13.46□□□□□ -0.25
USP46-204ENST00000503060 GRAPLQ8TC17 118 aaPredicted RBP13.46□□□□□ -0.25
USP46-204ENST00000503060 ZNF384Q8TF68 577 aa13.46□□□□□ -0.25
USP46-204ENST00000503060 SDR42E1Q8WUS8 393 aa13.46□□□□□ -0.25
USP46-204ENST00000503060 FBXW7Q969H0 707 aa13.46□□□□□ -0.25
USP46-204ENST00000503060 PDLIM2Q96JY6 352 aa13.46□□□□□ -0.25
USP46-204ENST00000503060 RNF41Q9H4P4 317 aaPredicted RBP13.46□□□□□ -0.25
USP46-204ENST00000503060 RRAGDQ9NQL2 400 aaPredicted RBP13.46□□□□□ -0.25
USP46-204ENST00000503060 IRS2Q9Y4H2 1338 aa13.46□□□□□ -0.26
USP46-204ENST00000503060 CDKL5O76039 1030 aa13.45□□□□□ -0.26
USP46-204ENST00000503060 DYNLL1P63167 89 aaKnown RBP13.45□□□□□ -0.26
USP46-204ENST00000503060 RRP12Q5JTH9 1297 aaKnown RBP13.45□□□□□ -0.26
USP46-204ENST00000503060 OTUD7BQ6GQQ9 843 aa13.45□□□□□ -0.26
USP46-204ENST00000503060 CPLX2Q6PUV4 134 aaKnown RBP13.45□□□□□ -0.26
USP46-204ENST00000503060 MICU3Q86XE3 530 aa13.45□□□□□ -0.26
USP46-204ENST00000503060 USP28Q96RU2 1077 aa13.45□□□□□ -0.26
USP46-204ENST00000503060 NUP62CLQ9H1M0 184 aa13.45□□□□□ -0.26
USP46-204ENST00000503060 UBR3Q6ZT12 1888 aa13.45□□□□□ -0.26
USP46-204ENST00000503060 RXRAP19793 462 aa13.45□□□□□ -0.26
USP46-204ENST00000503060 CDC27P30260 824 aa13.45□□□□□ -0.26
USP46-204ENST00000503060 CEBPZQ03701 1054 aaKnown RBP13.45□□□□□ -0.26
USP46-204ENST00000503060 SLC27A3Q5K4L6 730 aa13.45□□□□□ -0.26
USP46-204ENST00000503060 PRR5LQ6MZQ0 368 aa13.45□□□□□ -0.26
USP46-204ENST00000503060 BICD2Q8TD16 824 aa13.45□□□□□ -0.26
USP46-204ENST00000503060 NSUN4Q96CB9 384 aaKnown RBP13.45□□□□□ -0.26
USP46-204ENST00000503060 TOMM22Q9NS69 142 aa13.45□□□□□ -0.26
USP46-204ENST00000503060 DDX19AQ9NUU7 478 aaKnown RBP13.45□□□□□ -0.26
USP46-204ENST00000503060 ANAPC4Q9UJX5 808 aa13.45□□□□□ -0.26
USP46-204ENST00000503060 MYH13Q9UKX3 1938 aa13.45□□□□□ -0.26
USP46-204ENST00000503060 GOLGA8AA7E2F4 631 aa13.44□□□□□ -0.26
USP46-204ENST00000503060 UVSSAQ2YD98 709 aa13.44□□□□□ -0.26
USP46-204ENST00000503060 MTA3Q9BTC8 594 aa13.44□□□□□ -0.26
USP46-204ENST00000503060 FTOQ9C0B1 505 aaKnown RBP eCLIP13.44□□□□□ -0.26
USP46-204ENST00000503060 TMEM51Q9NW97 253 aa13.44□□□□□ -0.26
USP46-204ENST00000503060 DACT1Q9NYF0 836 aa13.44□□□□□ -0.26
USP46-204ENST00000503060 SUGT1Q9Y2Z0 365 aa13.44□□□□□ -0.26
USP46-204ENST00000503060 CCDC69A6NI79 296 aa13.44□□□□□ -0.26
USP46-204ENST00000503060 MINDY4BA8MYZ0 360 aa13.44□□□□□ -0.26
USP46-204ENST00000503060 GYS1P13807 737 aa13.44□□□□□ -0.26
USP46-204ENST00000503060 MECOMQ03112 1051 aa13.44□□□□□ -0.26
USP46-204ENST00000503060 CHAF1AQ13111 956 aaPredicted RBP13.44□□□□□ -0.26
USP46-204ENST00000503060 TXNRD3Q86VQ6 643 aa13.44□□□□□ -0.26
USP46-204ENST00000503060 BRIP1Q9BX63 1249 aa13.44□□□□□ -0.26
USP46-204ENST00000503060 FAM217BQ9NTX9 383 aaPredicted RBP13.44□□□□□ -0.26
USP46-204ENST00000503060 SLC12A7Q9Y666 1083 aa13.44□□□□□ -0.26
USP46-204ENST00000503060 SART3Q15020 963 aaKnown RBP13.43□□□□□ -0.26
USP46-204ENST00000503060 NTRK3Q16288 839 aa13.43□□□□□ -0.26
USP46-204ENST00000503060 MAP3K11Q16584 847 aa13.43□□□□□ -0.26
USP46-204ENST00000503060 KRT27Q7Z3Y8 459 aa13.43□□□□□ -0.26
USP46-204ENST00000503060 STK11IPQ8N1F8 1099 aa13.43□□□□□ -0.26
USP46-204ENST00000503060 MYL10Q9BUA6 226 aa13.43□□□□□ -0.26
USP46-204ENST00000503060 LEMD3Q9Y2U8 911 aa13.43□□□□□ -0.26
USP46-204ENST00000503060 NID2Q14112 1375 aa13.43□□□□□ -0.26
USP46-204ENST00000503060 WTAPQ15007 396 aa13.43□□□□□ -0.26
USP46-204ENST00000503060 SYNE3Q6ZMZ3 975 aa13.43□□□□□ -0.26
USP46-204ENST00000503060 BRAPQ7Z569 592 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms