RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 LIN37Q96GY3 246 aaPredicted RBP7.33□□□□□ -1.24
PROM1-203ENST00000502943 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.32□□□□□ -1.24
PROM1-203ENST00000502943 RAP1GAPP47736 663 aa7.32□□□□□ -1.24
PROM1-203ENST00000502943 PTPN12Q05209 780 aaKnown RBP7.32□□□□□ -1.24
PROM1-203ENST00000502943 C1QL4Q86Z23 238 aa7.32□□□□□ -1.24
PROM1-203ENST00000502943 TOX2Q96NM4 488 aa7.32□□□□□ -1.24
PROM1-203ENST00000502943 TNKS2Q9H2K2 1166 aa7.32□□□□□ -1.24
PROM1-203ENST00000502943 PCOLCE2Q9UKZ9 415 aa7.32□□□□□ -1.24
PROM1-203ENST00000502943 GSTP1P09211 210 aaKnown RBP7.31□□□□□ -1.24
PROM1-203ENST00000502943 LCNL1Q6ZST4 164 aa7.31□□□□□ -1.24
PROM1-203ENST00000502943 ISL2Q96A47 359 aa7.31□□□□□ -1.24
PROM1-203ENST00000502943 HEXIM2Q96MH2 286 aaKnown RBP7.31□□□□□ -1.24
PROM1-203ENST00000502943 FAM53CQ9NYF3 392 aa7.31□□□□□ -1.24
PROM1-203ENST00000502943 SERPINA10Q9UK55 444 aa7.31□□□□□ -1.24
PROM1-203ENST00000502943 MTMR7Q9Y216 660 aa7.31□□□□□ -1.24
PROM1-203ENST00000502943 ZP2Q05996 745 aa7.3□□□□□ -1.24
PROM1-203ENST00000502943 IKZF1Q13422 519 aa7.3□□□□□ -1.24
PROM1-203ENST00000502943 RPS26P11Q5JNZ5 115 aaPredicted RBP7.3□□□□□ -1.24
PROM1-203ENST00000502943 FYB2Q5VWT5 728 aa7.3□□□□□ -1.24
PROM1-203ENST00000502943 LRRC56Q8IYG6 542 aaPredicted RBP7.3□□□□□ -1.24
PROM1-203ENST00000502943 KRT82Q9NSB4 513 aa7.3□□□□□ -1.24
PROM1-203ENST00000502943 CTNND2Q9UQB3 1225 aa7.3□□□□□ -1.24
PROM1-203ENST00000502943 TMEM238LA0A1B0GVL6 79 aa7.29□□□□□ -1.24
PROM1-203ENST00000502943 CARNS1A5YM72 827 aa7.29□□□□□ -1.24
PROM1-203ENST00000502943 CPNE3O75131 537 aaKnown RBP7.29□□□□□ -1.24
PROM1-203ENST00000502943 TSPAN15O95858 294 aa7.29□□□□□ -1.24
PROM1-203ENST00000502943 PRPF40BQ6NWY9 871 aaKnown RBP7.29□□□□□ -1.24
PROM1-203ENST00000502943 SSU72Q9NP77 194 aaKnown RBP7.29□□□□□ -1.24
PROM1-203ENST00000502943 LCE5AQ5TCM9 118 aa7.28□□□□□ -1.24
PROM1-203ENST00000502943 LILRA6Q6PI73 481 aa7.28□□□□□ -1.24
PROM1-203ENST00000502943 FAM214BQ7L5A3 538 aa7.28□□□□□ -1.24
PROM1-203ENST00000502943 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.28□□□□□ -1.24
PROM1-203ENST00000502943 SPACA3Q8IXA5 215 aa7.28□□□□□ -1.24
PROM1-203ENST00000502943 KCNB2Q92953 911 aa7.28□□□□□ -1.24
PROM1-203ENST00000502943 BRPF3Q9ULD4 1205 aa7.28□□□□□ -1.24
PROM1-203ENST00000502943 SNX11Q9Y5W9 270 aa7.28□□□□□ -1.24
PROM1-203ENST00000502943 GADD45BO75293 160 aaPredicted RBP7.27□□□□□ -1.25
PROM1-203ENST00000502943 NEFLP07196 543 aa7.27□□□□□ -1.25
PROM1-203ENST00000502943 PRR23BQ6ZRT6 265 aa7.27□□□□□ -1.25
PROM1-203ENST00000502943 SYDE1Q6ZW31 735 aaPredicted RBP7.27□□□□□ -1.25
PROM1-203ENST00000502943 PDZD3Q86UT5 571 aa7.27□□□□□ -1.25
PROM1-203ENST00000502943 ASB11Q8WXH4 323 aa7.27□□□□□ -1.25
PROM1-203ENST00000502943 ZSCAN18Q8TBC5 510 aaPredicted RBP7.26□□□□□ -1.25
PROM1-203ENST00000502943 STK35Q8TDR2 534 aa7.26□□□□□ -1.25
PROM1-203ENST00000502943 CCDC74AQ96AQ1 378 aa7.26□□□□□ -1.25
PROM1-203ENST00000502943 PPP1R16BQ96T49 567 aa7.26□□□□□ -1.25
PROM1-203ENST00000502943 ZSCAN22P10073 491 aaPredicted RBP7.25□□□□□ -1.25
PROM1-203ENST00000502943 GRM2Q14416 872 aa7.25□□□□□ -1.25
PROM1-203ENST00000502943 LMCD1Q9NZU5 365 aa7.25□□□□□ -1.25
PROM1-203ENST00000502943 GPN3Q9UHW5 284 aaPredicted RBP7.25□□□□□ -1.25
PROM1-203ENST00000502943 ICMTO60725 284 aa7.24□□□□□ -1.25
PROM1-203ENST00000502943 C1QTNF9P0C862 333 aa7.24□□□□□ -1.25
PROM1-203ENST00000502943 AFMP43652 599 aa7.24□□□□□ -1.25
PROM1-203ENST00000502943 HNRNPUQ00839 825 aaKnown RBP eCLIP7.24□□□□□ -1.25
PROM1-203ENST00000502943 ECM1Q16610 540 aa7.24□□□□□ -1.25
PROM1-203ENST00000502943 NKPD1Q17RQ9 610 aa7.24□□□□□ -1.25
PROM1-203ENST00000502943 ZC3H12AQ5D1E8 599 aaKnown RBP7.24□□□□□ -1.25
PROM1-203ENST00000502943 MPZL3Q6UWV2 235 aa7.24□□□□□ -1.25
PROM1-203ENST00000502943 ANKLE2Q86XL3 938 aa7.24□□□□□ -1.25
PROM1-203ENST00000502943 RNF214Q8ND24 703 aa7.24□□□□□ -1.25
PROM1-203ENST00000502943 GTF2IRD1Q9UHL9 959 aa7.24□□□□□ -1.25
PROM1-203ENST00000502943 NCANO14594 1321 aa7.24□□□□□ -1.25
PROM1-203ENST00000502943 PITPNM2Q9BZ72 1349 aa7.24□□□□□ -1.25
PROM1-203ENST00000502943 ARID3CA6NKF2 412 aa7.23□□□□□ -1.25
PROM1-203ENST00000502943 H3BRB1 525 aa7.23□□□□□ -1.25
PROM1-203ENST00000502943 EIF1AYO14602 144 aaKnown RBP7.23□□□□□ -1.25
PROM1-203ENST00000502943 PRRG2O14669 202 aa7.23□□□□□ -1.25
PROM1-203ENST00000502943 KRT1P04264 644 aa7.23□□□□□ -1.25
PROM1-203ENST00000502943 GLI1P08151 1106 aa7.23□□□□□ -1.25
PROM1-203ENST00000502943 UBE3DQ7Z6J8 389 aa7.23□□□□□ -1.25
PROM1-203ENST00000502943 FAM129BQ96TA1 746 aa7.23□□□□□ -1.25
PROM1-203ENST00000502943 TUT1Q9H6E5 874 aaKnown RBP7.23□□□□□ -1.25
PROM1-203ENST00000502943 PRDM10Q9NQV6 1147 aa7.23□□□□□ -1.25
PROM1-203ENST00000502943 TMEM39AQ9NV64 488 aa7.23□□□□□ -1.25
PROM1-203ENST00000502943 IGF2BP3O00425 579 aaKnown RBP eCLIP7.22□□□□□ -1.25
PROM1-203ENST00000502943 ERVK-24P63145 666 aa7.22□□□□□ -1.25
PROM1-203ENST00000502943 PPP2R3AQ06190 1150 aa7.22□□□□□ -1.25
PROM1-203ENST00000502943 MAP1SQ66K74 1059 aaPredicted RBP7.22□□□□□ -1.25
PROM1-203ENST00000502943 DTHD1Q6ZMT9 781 aa7.22□□□□□ -1.25
PROM1-203ENST00000502943 SULF2Q8IWU5 870 aa7.22□□□□□ -1.25
PROM1-203ENST00000502943 EPS8L3Q8TE67 593 aaKnown RBP7.22□□□□□ -1.25
PROM1-203ENST00000502943 KIRREL1Q96J84 757 aa7.22□□□□□ -1.25
PROM1-203ENST00000502943 TRAK1Q9UPV9 953 aa7.22□□□□□ -1.25
PROM1-203ENST00000502943 B8ZZF3 427 aa7.21□□□□□ -1.26
PROM1-203ENST00000502943 NDUFB5O43674 189 aa7.21□□□□□ -1.26
PROM1-203ENST00000502943 FCGRTP55899 365 aa7.21□□□□□ -1.26
PROM1-203ENST00000502943 ARHGAP4P98171 946 aa7.21□□□□□ -1.26
PROM1-203ENST00000502943 PPM1JQ5JR12 505 aa7.21□□□□□ -1.26
PROM1-203ENST00000502943 CYFIP1Q7L576 1253 aa7.21□□□□□ -1.26
PROM1-203ENST00000502943 SIAH1Q8IUQ4 282 aa7.21□□□□□ -1.26
PROM1-203ENST00000502943 GLYCTKQ8IVS8 523 aa7.21□□□□□ -1.26
PROM1-203ENST00000502943 GPBAR1Q8TDU6 330 aa7.21□□□□□ -1.26
PROM1-203ENST00000502943 CARS2Q9HA77 564 aaKnown RBP7.21□□□□□ -1.26
PROM1-203ENST00000502943 EGFL7Q9UHF1 273 aa7.21□□□□□ -1.26
PROM1-203ENST00000502943 CSADQ9Y600 493 aa7.21□□□□□ -1.26
PROM1-203ENST00000502943 GPR182O15218 404 aa7.2□□□□□ -1.26
PROM1-203ENST00000502943 BUD31P41223 144 aaPredicted RBP7.2□□□□□ -1.26
PROM1-203ENST00000502943 PDE3BQ13370 1112 aa7.2□□□□□ -1.26
PROM1-203ENST00000502943 TMEM67Q5HYA8 995 aa7.2□□□□□ -1.26
PROM1-203ENST00000502943 TTLL10Q6ZVT0 673 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms