RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 ZHX2Q9Y6X8 837 aa22.64■■□□□ 1.21
HERC6-204ENST00000502870 PUM3Q15397 648 aaKnown RBP22.63■■□□□ 1.21
HERC6-204ENST00000502870 VGLL2Q8N8G2 317 aa22.63■■□□□ 1.21
HERC6-204ENST00000502870 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.63■■□□□ 1.21
HERC6-204ENST00000502870 DAGLAQ9Y4D2 1042 aa22.63■■□□□ 1.21
HERC6-204ENST00000502870 LRRC24Q50LG9 513 aa22.62■■□□□ 1.21
HERC6-204ENST00000502870 DOCK1Q14185 1865 aa22.62■■□□□ 1.21
HERC6-204ENST00000502870 EXOSC9Q06265 439 aaKnown RBP22.61■■□□□ 1.21
HERC6-204ENST00000502870 NFIAQ12857 509 aa22.61■■□□□ 1.21
HERC6-204ENST00000502870 TDHQ8IZJ6 230 aa22.61■■□□□ 1.21
HERC6-204ENST00000502870 NBPF3Q9H094 633 aa22.61■■□□□ 1.21
HERC6-204ENST00000502870 PNMA3Q9UL41 463 aa22.61■■□□□ 1.21
HERC6-204ENST00000502870 ZMYND8Q9ULU4 1186 aaPredicted RBP22.61■■□□□ 1.21
HERC6-204ENST00000502870 HMGCRP04035 888 aa22.6■■□□□ 1.21
HERC6-204ENST00000502870 PTPRAP18433 802 aa22.6■■□□□ 1.21
HERC6-204ENST00000502870 RABL6Q3YEC7 729 aaPredicted RBP22.6■■□□□ 1.21
HERC6-204ENST00000502870 DIS3LQ8TF46 1054 aaKnown RBP22.6■■□□□ 1.21
HERC6-204ENST00000502870 KAZALD1Q96I82 304 aa22.6■■□□□ 1.21
HERC6-204ENST00000502870 USP40Q9NVE5 1235 aa22.6■■□□□ 1.21
HERC6-204ENST00000502870 AFG3L2Q9Y4W6 797 aa22.6■■□□□ 1.21
HERC6-204ENST00000502870 LRRFIP2Q9Y608 721 aaKnown RBP22.6■■□□□ 1.21
HERC6-204ENST00000502870 FAM110CQ1W6H9 321 aa22.59■■□□□ 1.21
HERC6-204ENST00000502870 Q7L0L9 218 aa22.59■■□□□ 1.21
HERC6-204ENST00000502870 BICC1Q9H694 974 aaKnown RBP22.59■■□□□ 1.21
HERC6-204ENST00000502870 MTMR10Q9NXD2 777 aa22.59■■□□□ 1.21
HERC6-204ENST00000502870 FAM198AQ9UFP1 575 aa22.59■■□□□ 1.21
HERC6-204ENST00000502870 DDX60LQ5H9U9 1706 aaKnown RBP22.59■■□□□ 1.21
HERC6-204ENST00000502870 UTYO14607 1347 aa22.58■■□□□ 1.21
HERC6-204ENST00000502870 PHF20L1A8MW92 1017 aa22.58■■□□□ 1.21
HERC6-204ENST00000502870 NBPF7P0C2Y1 421 aaPredicted RBP22.58■■□□□ 1.21
HERC6-204ENST00000502870 SLC5A1P13866 664 aa22.58■■□□□ 1.21
HERC6-204ENST00000502870 DIXDC1Q155Q3 683 aa22.58■■□□□ 1.21
HERC6-204ENST00000502870 ANKRD13CQ8N6S4 541 aa22.58■■□□□ 1.21
HERC6-204ENST00000502870 AGTPBP1Q9UPW5 1226 aa22.58■■□□□ 1.21
HERC6-204ENST00000502870 UNC80Q8N2C7 3258 aa22.58■■□□□ 1.2
HERC6-204ENST00000502870 PHIPQ8WWQ0 1821 aa22.57■■□□□ 1.2
HERC6-204ENST00000502870 ENTPD3O75355 529 aa22.57■■□□□ 1.2
HERC6-204ENST00000502870 LDHBP07195 334 aaKnown RBP22.57■■□□□ 1.2
HERC6-204ENST00000502870 WDR63Q8IWG1 891 aa22.57■■□□□ 1.2
HERC6-204ENST00000502870 UBE2OQ9C0C9 1292 aaKnown RBP22.57■■□□□ 1.2
HERC6-204ENST00000502870 C11orf49Q9H6J7 331 aa22.57■■□□□ 1.2
HERC6-204ENST00000502870 HMX1Q9NP08 348 aaPredicted RBP22.57■■□□□ 1.2
HERC6-204ENST00000502870 RPTORQ8N122 1335 aa22.57■■□□□ 1.2
HERC6-204ENST00000502870 ATRNL1Q5VV63 1379 aa22.56■■□□□ 1.2
HERC6-204ENST00000502870 CTNND1O60716 968 aaKnown RBP22.56■■□□□ 1.2
HERC6-204ENST00000502870 FGFR2P21802 821 aa22.56■■□□□ 1.2
HERC6-204ENST00000502870 MAGEA10P43363 369 aaPredicted RBP22.56■■□□□ 1.2
HERC6-204ENST00000502870 ZSCAN29Q8IWY8 852 aaPredicted RBP22.56■■□□□ 1.2
HERC6-204ENST00000502870 GNL3LQ9NVN8 582 aaKnown RBP22.56■■□□□ 1.2
HERC6-204ENST00000502870 MYH2Q9UKX2 1941 aa22.55■■□□□ 1.2
HERC6-204ENST00000502870 TRIM75PA6NK02 468 aa22.55■■□□□ 1.2
HERC6-204ENST00000502870 LPIN2Q92539 896 aa22.55■■□□□ 1.2
HERC6-204ENST00000502870 SYN1P17600 705 aa22.54■■□□□ 1.2
HERC6-204ENST00000502870 GCLCP48506 637 aaPredicted RBP22.54■■□□□ 1.2
HERC6-204ENST00000502870 RGS3P49796 1198 aa22.54■■□□□ 1.2
HERC6-204ENST00000502870 ANKRD44Q8N8A2 993 aa22.54■■□□□ 1.2
HERC6-204ENST00000502870 COL25A1Q9BXS0 654 aaPredicted RBP22.54■■□□□ 1.2
HERC6-204ENST00000502870 IDI2Q9BXS1 227 aa22.54■■□□□ 1.2
HERC6-204ENST00000502870 PRDX5P30044 214 aa22.53■■□□□ 1.2
HERC6-204ENST00000502870 PABPC4Q13310 644 aaKnown RBP eCLIP22.53■■□□□ 1.2
HERC6-204ENST00000502870 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.53■■□□□ 1.2
HERC6-204ENST00000502870 PROCA1Q8NCQ7 364 aaPredicted RBP22.53■■□□□ 1.2
HERC6-204ENST00000502870 SPINK5Q9NQ38 1064 aaPredicted RBP22.53■■□□□ 1.2
HERC6-204ENST00000502870 ZFPM1Q8IX07 1006 aa22.52■■□□□ 1.2
HERC6-204ENST00000502870 SALL1Q9NSC2 1324 aa22.52■■□□□ 1.2
HERC6-204ENST00000502870 LOC285556D6RIA3 1793 aa22.51■■□□□ 1.19
HERC6-204ENST00000502870 MAP3K10Q02779 954 aa22.51■■□□□ 1.19
HERC6-204ENST00000502870 ZGPATQ8N5A5 531 aaKnown RBP22.51■■□□□ 1.19
HERC6-204ENST00000502870 KLHDC4Q8TBB5 520 aa22.51■■□□□ 1.19
HERC6-204ENST00000502870 EYA2O00167 538 aa22.5■■□□□ 1.19
HERC6-204ENST00000502870 SEMA3EO15041 775 aa22.5■■□□□ 1.19
HERC6-204ENST00000502870 SLF2Q8IX21 1173 aa22.5■■□□□ 1.19
HERC6-204ENST00000502870 OGDHLQ9ULD0 1010 aa22.5■■□□□ 1.19
HERC6-204ENST00000502870 DENND2AQ9ULE3 1009 aa22.5■■□□□ 1.19
HERC6-204ENST00000502870 TBC1D2Q9BYX2 928 aa22.49■■□□□ 1.19
HERC6-204ENST00000502870 TREML2Q5T2D2 321 aa22.48■■□□□ 1.19
HERC6-204ENST00000502870 FAM109BQ6ICB4 259 aaPredicted RBP22.48■■□□□ 1.19
HERC6-204ENST00000502870 RFX7Q2KHR2 1363 aa22.48■■□□□ 1.19
HERC6-204ENST00000502870 DZIP1Q86YF9 867 aaKnown RBP22.47■■□□□ 1.19
HERC6-204ENST00000502870 GAKO14976 1311 aa22.47■■□□□ 1.19
HERC6-204ENST00000502870 ATAD5Q96QE3 1844 aa22.47■■□□□ 1.19
HERC6-204ENST00000502870 SH3BP5LQ7L8J4 393 aa22.46■■□□□ 1.19
HERC6-204ENST00000502870 TRMT44Q8IYL2 757 aaKnown RBP22.46■■□□□ 1.19
HERC6-204ENST00000502870 GJD2Q9UKL4 321 aa22.46■■□□□ 1.19
HERC6-204ENST00000502870 DDTLA6NHG4 134 aaPredicted RBP22.45■■□□□ 1.18
HERC6-204ENST00000502870 TBC1D12O60347 775 aa22.45■■□□□ 1.18
HERC6-204ENST00000502870 PRKAR2AP13861 404 aaKnown RBP22.45■■□□□ 1.18
HERC6-204ENST00000502870 ATP2B3Q16720 1220 aa22.45■■□□□ 1.18
HERC6-204ENST00000502870 TRIB2Q92519 343 aa22.45■■□□□ 1.18
HERC6-204ENST00000502870 OSBPL5Q9H0X9 879 aaPredicted RBP22.45■■□□□ 1.18
HERC6-204ENST00000502870 SALL2Q9Y467 1007 aaPredicted RBP22.45■■□□□ 1.18
HERC6-204ENST00000502870 PLXNB2O15031 1838 aa22.45■■□□□ 1.18
HERC6-204ENST00000502870 PFASO15067 1338 aa22.44■■□□□ 1.18
HERC6-204ENST00000502870 TRIM32Q13049 653 aa22.44■■□□□ 1.18
HERC6-204ENST00000502870 SPP2Q13103 211 aa22.44■■□□□ 1.18
HERC6-204ENST00000502870 PICALMQ13492 652 aa22.44■■□□□ 1.18
HERC6-204ENST00000502870 MAP3K21Q5TCX8 1036 aa22.44■■□□□ 1.18
HERC6-204ENST00000502870 ZNF280CQ8ND82 737 aa22.44■■□□□ 1.18
HERC6-204ENST00000502870 SOCS4Q8WXH5 440 aa22.44■■□□□ 1.18
HERC6-204ENST00000502870 FBXO3Q9UK99 471 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms