RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 HDAC9Q9UKV0 1011 aa15.97■□□□□ 0.15
SGCA-203ENST00000502555 LIMCH1Q9UPQ0 1083 aa15.97■□□□□ 0.15
SGCA-203ENST00000502555 MINDY4BA8MYZ0 360 aa15.96■□□□□ 0.15
SGCA-203ENST00000502555 RPS12P25398 132 aaKnown RBP15.96■□□□□ 0.15
SGCA-203ENST00000502555 EXOSC10Q01780 885 aaKnown RBP15.96■□□□□ 0.15
SGCA-203ENST00000502555 MFSD6Q6ZSS7 791 aa15.96■□□□□ 0.15
SGCA-203ENST00000502555 FBXL16Q8N461 479 aa15.96■□□□□ 0.15
SGCA-203ENST00000502555 OGFOD1Q8N543 542 aa15.96■□□□□ 0.15
SGCA-203ENST00000502555 TGFBRAP1Q8WUH2 860 aa15.96■□□□□ 0.15
SGCA-203ENST00000502555 TMX3Q96JJ7 454 aa15.96■□□□□ 0.15
SGCA-203ENST00000502555 MCM9Q9NXL9 1143 aa15.96■□□□□ 0.15
SGCA-203ENST00000502555 FLT1P17948 1338 aa15.96■□□□□ 0.15
SGCA-203ENST00000502555 ROBO3Q96MS0 1386 aa15.96■□□□□ 0.15
SGCA-203ENST00000502555 FZD9O00144 591 aa15.95■□□□□ 0.14
SGCA-203ENST00000502555 LMNB1P20700 586 aa15.95■□□□□ 0.14
SGCA-203ENST00000502555 PRELPP51888 382 aa15.95■□□□□ 0.14
SGCA-203ENST00000502555 EIF6P56537 245 aaKnown RBP15.95■□□□□ 0.14
SGCA-203ENST00000502555 CTDSPL2Q05D32 466 aa15.95■□□□□ 0.14
SGCA-203ENST00000502555 COL9A3Q14050 684 aaPredicted RBP15.95■□□□□ 0.14
SGCA-203ENST00000502555 ARHGAP27Q6ZUM4 889 aa15.95■□□□□ 0.14
SGCA-203ENST00000502555 ZSCAN31Q96LW9 406 aaPredicted RBP15.95■□□□□ 0.14
SGCA-203ENST00000502555 AGXT2Q9BYV1 514 aa15.95■□□□□ 0.14
SGCA-203ENST00000502555 USP40Q9NVE5 1235 aa15.95■□□□□ 0.14
SGCA-203ENST00000502555 NEDD4P46934 1319 aa15.95■□□□□ 0.14
SGCA-203ENST00000502555 NPM3O75607 178 aaKnown RBP15.94■□□□□ 0.14
SGCA-203ENST00000502555 WDHD1O75717 1129 aaPredicted RBP15.94■□□□□ 0.14
SGCA-203ENST00000502555 HSP90AA1P07900 732 aaKnown RBP15.94■□□□□ 0.14
SGCA-203ENST00000502555 FGRP09769 529 aa15.94■□□□□ 0.14
SGCA-203ENST00000502555 USP17L8P0C7I0 530 aa15.94■□□□□ 0.14
SGCA-203ENST00000502555 RBM5P52756 815 aaKnown RBP eCLIP15.94■□□□□ 0.14
SGCA-203ENST00000502555 CUL4AQ13619 759 aa15.94■□□□□ 0.14
SGCA-203ENST00000502555 C12orf60Q5U649 245 aa15.94■□□□□ 0.14
SGCA-203ENST00000502555 CDC42EP5Q6NZY7 148 aa15.94■□□□□ 0.14
SGCA-203ENST00000502555 MAPKAPK5Q8IW41 473 aa15.94■□□□□ 0.14
SGCA-203ENST00000502555 MTA3Q9BTC8 594 aa15.94■□□□□ 0.14
SGCA-203ENST00000502555 SH2B1Q9NRF2 756 aaPredicted RBP15.94■□□□□ 0.14
SGCA-203ENST00000502555 PRC1O43663 620 aa15.94■□□□□ 0.14
SGCA-203ENST00000502555 ORC4O43929 436 aa15.94■□□□□ 0.14
SGCA-203ENST00000502555 FGD1P98174 961 aa15.94■□□□□ 0.14
SGCA-203ENST00000502555 TOB2Q14106 344 aaPredicted RBP15.94■□□□□ 0.14
SGCA-203ENST00000502555 CFAP100Q494V2 611 aa15.94■□□□□ 0.14
SGCA-203ENST00000502555 Q6ZUG5 572 aa15.94■□□□□ 0.14
SGCA-203ENST00000502555 MTMR14Q8NCE2 650 aa15.94■□□□□ 0.14
SGCA-203ENST00000502555 TCEANC2Q96MN5 208 aa15.94■□□□□ 0.14
SGCA-203ENST00000502555 LAMB1P07942 1786 aa15.93■□□□□ 0.14
SGCA-203ENST00000502555 DDX60LQ5H9U9 1706 aaKnown RBP15.93■□□□□ 0.14
SGCA-203ENST00000502555 NAV1Q8NEY1 1877 aa15.93■□□□□ 0.14
SGCA-203ENST00000502555 CYP2D7A0A087X1C5 515 aa15.93■□□□□ 0.14
SGCA-203ENST00000502555 B4E1Z4 1266 aa15.93■□□□□ 0.14
SGCA-203ENST00000502555 POLR3DP05423 398 aaPredicted RBP15.93■□□□□ 0.14
SGCA-203ENST00000502555 ANTXR2P58335 489 aa15.93■□□□□ 0.14
SGCA-203ENST00000502555 PDE4BQ07343 736 aa15.93■□□□□ 0.14
SGCA-203ENST00000502555 NOL8Q76FK4 1167 aaKnown RBP15.93■□□□□ 0.14
SGCA-203ENST00000502555 ESR2Q92731 530 aa15.93■□□□□ 0.14
SGCA-203ENST00000502555 INTS4Q96HW7 963 aaKnown RBP15.93■□□□□ 0.14
SGCA-203ENST00000502555 TMEM87BQ96K49 555 aa15.93■□□□□ 0.14
SGCA-203ENST00000502555 IDI2Q9BXS1 227 aa15.93■□□□□ 0.14
SGCA-203ENST00000502555 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.93■□□□□ 0.14
SGCA-203ENST00000502555 ZBTB12Q9Y330 459 aaPredicted RBP15.93■□□□□ 0.14
SGCA-203ENST00000502555 SPDYE2BA6NHP3 402 aa15.92■□□□□ 0.14
SGCA-203ENST00000502555 SPDYE6P0CI01 402 aa15.92■□□□□ 0.14
SGCA-203ENST00000502555 CYP2D6P10635 497 aa15.92■□□□□ 0.14
SGCA-203ENST00000502555 DLGAP5Q15398 846 aa15.92■□□□□ 0.14
SGCA-203ENST00000502555 DPF2Q92785 391 aa15.92■□□□□ 0.14
SGCA-203ENST00000502555 OSBPL5Q9H0X9 879 aaPredicted RBP15.92■□□□□ 0.14
SGCA-203ENST00000502555 ZNF287Q9HBT7 754 aa15.92■□□□□ 0.14
SGCA-203ENST00000502555 TOMM22Q9NS69 142 aa15.92■□□□□ 0.14
SGCA-203ENST00000502555 TAOK2Q9UL54 1235 aa15.92■□□□□ 0.14
SGCA-203ENST00000502555 TPCN1Q9ULQ1 816 aa15.92■□□□□ 0.14
SGCA-203ENST00000502555 TACC3Q9Y6A5 838 aa15.92■□□□□ 0.14
SGCA-203ENST00000502555 ADAMTSL1Q8N6G6 1762 aa15.91■□□□□ 0.14
SGCA-203ENST00000502555 KDM4AO75164 1064 aa15.91■□□□□ 0.14
SGCA-203ENST00000502555 YBX3P16989 372 aaKnown RBP eCLIP15.91■□□□□ 0.14
SGCA-203ENST00000502555 EVCP57679 992 aa15.91■□□□□ 0.14
SGCA-203ENST00000502555 ZNF280AP59817 542 aaPredicted RBP15.91■□□□□ 0.14
SGCA-203ENST00000502555 PICALMQ13492 652 aa15.91■□□□□ 0.14
SGCA-203ENST00000502555 SART3Q15020 963 aaKnown RBP15.91■□□□□ 0.14
SGCA-203ENST00000502555 RRP12Q5JTH9 1297 aaKnown RBP15.91■□□□□ 0.14
SGCA-203ENST00000502555 CYB5R4Q7L1T6 521 aa15.91■□□□□ 0.14
SGCA-203ENST00000502555 TTC6Q86TZ1 520 aa15.91■□□□□ 0.14
SGCA-203ENST00000502555 BRF1Q92994 677 aa15.91■□□□□ 0.14
SGCA-203ENST00000502555 TMOD2Q9NZR1 351 aa15.91■□□□□ 0.14
SGCA-203ENST00000502555 SAP30BPQ9UHR5 308 aaKnown RBP15.91■□□□□ 0.14
SGCA-203ENST00000502555 ANGEL1Q9UNK9 670 aaKnown RBP15.91■□□□□ 0.14
SGCA-203ENST00000502555 FOCADQ5VW36 1801 aa15.9■□□□□ 0.14
SGCA-203ENST00000502555 CHST3Q7LGC8 479 aa15.9■□□□□ 0.14
SGCA-203ENST00000502555 LRRC2Q9BYS8 371 aa15.9■□□□□ 0.14
SGCA-203ENST00000502555 DHX36Q9H2U1 1008 aaKnown RBP15.9■□□□□ 0.14
SGCA-203ENST00000502555 DDX4Q9NQI0 724 aaKnown RBP15.9■□□□□ 0.14
SGCA-203ENST00000502555 INCENPQ9NQS7 918 aa15.9■□□□□ 0.14
SGCA-203ENST00000502555 ZSWIM5Q9P217 1185 aa15.9■□□□□ 0.14
SGCA-203ENST00000502555 PCDHAC2Q9Y5I4 1007 aa15.9■□□□□ 0.14
SGCA-203ENST00000502555 COL2A1P02458 1487 aaPredicted RBP15.9■□□□□ 0.14
SGCA-203ENST00000502555 BAZ2AQ9UIF9 1905 aaKnown RBP15.9■□□□□ 0.14
SGCA-203ENST00000502555 ZNF541Q9H0D2 1346 aa15.89■□□□□ 0.13
SGCA-203ENST00000502555 SMIM22K7EJ46 135 aa15.89■□□□□ 0.13
SGCA-203ENST00000502555 SH2B2O14492 632 aaPredicted RBP15.89■□□□□ 0.13
SGCA-203ENST00000502555 ENTPD3O75355 529 aa15.89■□□□□ 0.13
SGCA-203ENST00000502555 GMPSP49915 693 aaPredicted RBP15.89■□□□□ 0.13
SGCA-203ENST00000502555 PLCD1P51178 756 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms