RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 LLGL2Q6P1M3 1020 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 GIMAP7Q8NHV1 300 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 EZH1Q92800 747 aaPredicted RBP4.4□□□□□ -1.71
SMAD1-203ENST00000502342 OSBPL1AQ9BXW6 950 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 KRTAP4-6Q9BYQ5 205 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 MRS2Q9HD23 443 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 ZFP64Q9NPA5 681 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 PICK1Q9NRD5 415 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 PRKAG2Q9UGJ0 569 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 PCDHB5Q9Y5E4 795 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 CTSHP09668 335 aa4.39□□□□□ -1.71
SMAD1-203ENST00000502342 LMNB1P20700 586 aa4.39□□□□□ -1.71
SMAD1-203ENST00000502342 CDK8P49336 464 aa4.39□□□□□ -1.71
SMAD1-203ENST00000502342 CDK5R2Q13319 367 aa4.39□□□□□ -1.71
SMAD1-203ENST00000502342 INPP5AQ14642 412 aa4.39□□□□□ -1.71
SMAD1-203ENST00000502342 TAF1CQ15572 869 aaPredicted RBP4.39□□□□□ -1.71
SMAD1-203ENST00000502342 ZC3H12AQ5D1E8 599 aaKnown RBP4.39□□□□□ -1.71
SMAD1-203ENST00000502342 ARTNQ5T4W7 220 aa4.39□□□□□ -1.71
SMAD1-203ENST00000502342 SV2BQ7L1I2 683 aa4.39□□□□□ -1.71
SMAD1-203ENST00000502342 SMYD4Q8IYR2 804 aaPredicted RBP4.39□□□□□ -1.71
SMAD1-203ENST00000502342 JARID2Q92833 1246 aaPredicted RBP4.39□□□□□ -1.71
SMAD1-203ENST00000502342 BCL2L13Q9BXK5 485 aa4.39□□□□□ -1.71
SMAD1-203ENST00000502342 ATXN3LQ9H3M9 355 aa4.39□□□□□ -1.71
SMAD1-203ENST00000502342 GSX1Q9H4S2 264 aaPredicted RBP4.39□□□□□ -1.71
SMAD1-203ENST00000502342 C1GALT1Q9NS00 363 aa4.39□□□□□ -1.71
SMAD1-203ENST00000502342 PCMTD2Q9NV79 361 aa4.39□□□□□ -1.71
SMAD1-203ENST00000502342 VTI1BQ9UEU0 232 aa4.39□□□□□ -1.71
SMAD1-203ENST00000502342 CYP8B1Q9UNU6 501 aa4.39□□□□□ -1.71
SMAD1-203ENST00000502342 LEMD3Q9Y2U8 911 aa4.39□□□□□ -1.71
SMAD1-203ENST00000502342 PCDHGC5Q9Y5F6 944 aa4.39□□□□□ -1.71
SMAD1-203ENST00000502342 SORBS3O60504 671 aa4.38□□□□□ -1.71
SMAD1-203ENST00000502342 COBLO75128 1261 aa4.38□□□□□ -1.71
SMAD1-203ENST00000502342 TRIM37O94972 964 aa4.38□□□□□ -1.71
SMAD1-203ENST00000502342 SEPT6Q14141 434 aa4.38□□□□□ -1.71
SMAD1-203ENST00000502342 ZNF326Q5BKZ1 582 aaKnown RBP4.38□□□□□ -1.71
SMAD1-203ENST00000502342 XP32Q5T750 250 aa4.38□□□□□ -1.71
SMAD1-203ENST00000502342 DUSP27Q5VZP5 1158 aa4.38□□□□□ -1.71
SMAD1-203ENST00000502342 SEZ6L2Q6UXD5 910 aa4.38□□□□□ -1.71
SMAD1-203ENST00000502342 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.38□□□□□ -1.71
SMAD1-203ENST00000502342 TMC4Q7Z404 712 aa4.38□□□□□ -1.71
SMAD1-203ENST00000502342 ZAR1Q86SH2 424 aa4.38□□□□□ -1.71
SMAD1-203ENST00000502342 NBPF11Q86T75 865 aa4.38□□□□□ -1.71
SMAD1-203ENST00000502342 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.38□□□□□ -1.71
SMAD1-203ENST00000502342 GIPC2Q8TF65 315 aa4.38□□□□□ -1.71
SMAD1-203ENST00000502342 ISL2Q96A47 359 aa4.38□□□□□ -1.71
SMAD1-203ENST00000502342 BCL11AQ9H165 835 aa4.38□□□□□ -1.71
SMAD1-203ENST00000502342 LRRC4CQ9HCJ2 640 aa4.38□□□□□ -1.71
SMAD1-203ENST00000502342 PCOLCE2Q9UKZ9 415 aa4.38□□□□□ -1.71
SMAD1-203ENST00000502342 TLR6Q9Y2C9 796 aa4.38□□□□□ -1.71
SMAD1-203ENST00000502342 SYNGAP1Q96PV0 1343 aa4.38□□□□□ -1.71
SMAD1-203ENST00000502342 RBAK-RBAKDNI3L0D1 243 aa4.37□□□□□ -1.71
SMAD1-203ENST00000502342 LEFTY1O75610 366 aa4.37□□□□□ -1.71
SMAD1-203ENST00000502342 NEFMP07197 916 aa4.37□□□□□ -1.71
SMAD1-203ENST00000502342 ITGAEP38570 1179 aa4.37□□□□□ -1.71
SMAD1-203ENST00000502342 MFAP1P55081 439 aaKnown RBP4.37□□□□□ -1.71
SMAD1-203ENST00000502342 LRP8Q14114 963 aa4.37□□□□□ -1.71
SMAD1-203ENST00000502342 ZNF765Q7L2R6 523 aa4.37□□□□□ -1.71
SMAD1-203ENST00000502342 UBE3DQ7Z6J8 389 aa4.37□□□□□ -1.71
SMAD1-203ENST00000502342 RNF214Q8ND24 703 aa4.37□□□□□ -1.71
SMAD1-203ENST00000502342 GATA6Q92908 595 aa4.37□□□□□ -1.71
SMAD1-203ENST00000502342 ELMO3Q96BJ8 720 aa4.37□□□□□ -1.71
SMAD1-203ENST00000502342 PIM2Q9P1W9 311 aa4.37□□□□□ -1.71
SMAD1-203ENST00000502342 USP31Q70CQ4 1352 aa4.37□□□□□ -1.71
SMAD1-203ENST00000502342 PRAMEF27A3QJZ7 478 aa4.36□□□□□ -1.71
SMAD1-203ENST00000502342 MINDY4BA8MYZ0 360 aa4.36□□□□□ -1.71
SMAD1-203ENST00000502342 CYP26A1O43174 497 aa4.36□□□□□ -1.71
SMAD1-203ENST00000502342 ADAMTS4O75173 837 aa4.36□□□□□ -1.71
SMAD1-203ENST00000502342 FAM87AP0C7U9 286 aa4.36□□□□□ -1.71
SMAD1-203ENST00000502342 GRIK1P39086 918 aa4.36□□□□□ -1.71
SMAD1-203ENST00000502342 LIG3P49916 1009 aa4.36□□□□□ -1.71
SMAD1-203ENST00000502342 ERVK-24P63145 666 aa4.36□□□□□ -1.71
SMAD1-203ENST00000502342 LRFN4Q6PJG9 635 aa4.36□□□□□ -1.71
SMAD1-203ENST00000502342 OGFOD3Q6PK18 319 aa4.36□□□□□ -1.71
SMAD1-203ENST00000502342 CDC37L1Q7L3B6 337 aa4.36□□□□□ -1.71
SMAD1-203ENST00000502342 ANKRD24Q8TF21 1146 aa4.36□□□□□ -1.71
SMAD1-203ENST00000502342 PLPPR2Q96GM1 343 aa4.36□□□□□ -1.71
SMAD1-203ENST00000502342 CACNA2D2Q9NY47 1150 aa4.36□□□□□ -1.71
SMAD1-203ENST00000502342 TFE3P19532 575 aaPredicted RBP4.35□□□□□ -1.71
SMAD1-203ENST00000502342 CD97P48960 835 aa4.35□□□□□ -1.71
SMAD1-203ENST00000502342 INTS5Q6P9B9 1019 aaKnown RBP4.35□□□□□ -1.71
SMAD1-203ENST00000502342 AGMOQ6ZNB7 445 aa4.35□□□□□ -1.71
SMAD1-203ENST00000502342 RELL1Q8IUW5 271 aa4.35□□□□□ -1.71
SMAD1-203ENST00000502342 PF4P02776 101 aa4.34□□□□□ -1.71
SMAD1-203ENST00000502342 RLBP1P12271 317 aa4.34□□□□□ -1.71
SMAD1-203ENST00000502342 GBP2P32456 591 aaPredicted RBP4.34□□□□□ -1.71
SMAD1-203ENST00000502342 RING1Q06587 406 aa4.34□□□□□ -1.71
SMAD1-203ENST00000502342 CYP27C1Q4G0S4 372 aa4.34□□□□□ -1.71
SMAD1-203ENST00000502342 DIEXFQ68CQ4 756 aaKnown RBP4.34□□□□□ -1.71
SMAD1-203ENST00000502342 HDXQ7Z353 690 aa4.34□□□□□ -1.71
SMAD1-203ENST00000502342 TOP6BLQ8N6T0 577 aa4.34□□□□□ -1.71
SMAD1-203ENST00000502342 FAM181AQ8N9Y4 354 aa4.34□□□□□ -1.71
SMAD1-203ENST00000502342 FANCGO15287 622 aa4.33□□□□□ -1.72
SMAD1-203ENST00000502342 FOSL1P15407 271 aa4.33□□□□□ -1.72
SMAD1-203ENST00000502342 ETF1P62495 437 aaKnown RBP4.33□□□□□ -1.72
SMAD1-203ENST00000502342 RPS26P62854 115 aaKnown RBP4.33□□□□□ -1.72
SMAD1-203ENST00000502342 CYP27A1Q02318 531 aa4.33□□□□□ -1.72
SMAD1-203ENST00000502342 FAM160A1Q05DH4 1040 aa4.33□□□□□ -1.72
SMAD1-203ENST00000502342 WIPI1Q5MNZ9 446 aaPredicted RBP4.33□□□□□ -1.72
SMAD1-203ENST00000502342 ZBTB37Q5TC79 503 aa4.33□□□□□ -1.72
SMAD1-203ENST00000502342 SCARA3Q6AZY7 606 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms