RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 ZFPM1Q8IX07 1006 aa11.47□□□□□ -0.57
CCDC171-209ENST00000498725 PIP4P2Q8N4L2 257 aa11.47□□□□□ -0.57
CCDC171-209ENST00000498725 DIS3LQ8TF46 1054 aaKnown RBP11.47□□□□□ -0.57
CCDC171-209ENST00000498725 ZNF112Q9UJU3 913 aa11.47□□□□□ -0.57
CCDC171-209ENST00000498725 DAGLAQ9Y4D2 1042 aa11.47□□□□□ -0.57
CCDC171-209ENST00000498725 ZHX2Q9Y6X8 837 aa11.47□□□□□ -0.57
CCDC171-209ENST00000498725 DDX60LQ5H9U9 1706 aaKnown RBP11.46□□□□□ -0.57
CCDC171-209ENST00000498725 IFIT1P09914 478 aaKnown RBP11.46□□□□□ -0.57
CCDC171-209ENST00000498725 SLURP2P0DP57 97 aa11.46□□□□□ -0.57
CCDC171-209ENST00000498725 SYN1P17600 705 aa11.46□□□□□ -0.57
CCDC171-209ENST00000498725 CCDC84Q86UT8 332 aaPredicted RBP11.46□□□□□ -0.57
CCDC171-209ENST00000498725 SP7Q8TDD2 431 aaPredicted RBP11.46□□□□□ -0.57
CCDC171-209ENST00000498725 USP40Q9NVE5 1235 aa11.46□□□□□ -0.57
CCDC171-209ENST00000498725 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.46□□□□□ -0.57
CCDC171-209ENST00000498725 FAM198AQ9UFP1 575 aa11.46□□□□□ -0.57
CCDC171-209ENST00000498725 ATAD5Q96QE3 1844 aa11.46□□□□□ -0.58
CCDC171-209ENST00000498725 PRDX5P30044 214 aa11.45□□□□□ -0.58
CCDC171-209ENST00000498725 NOL9Q5SY16 702 aaKnown RBP11.45□□□□□ -0.58
CCDC171-209ENST00000498725 ZSCAN29Q8IWY8 852 aaPredicted RBP11.45□□□□□ -0.58
CCDC171-209ENST00000498725 DEFB123Q8N688 67 aa11.45□□□□□ -0.58
CCDC171-209ENST00000498725 ANKRD44Q8N8A2 993 aa11.45□□□□□ -0.58
CCDC171-209ENST00000498725 VGLL2Q8N8G2 317 aa11.45□□□□□ -0.58
CCDC171-209ENST00000498725 SMCR8Q8TEV9 937 aaPredicted RBP11.45□□□□□ -0.58
CCDC171-209ENST00000498725 MRIQ9BWK5 157 aa11.45□□□□□ -0.58
CCDC171-209ENST00000498725 PICK1Q9NRD5 415 aa11.45□□□□□ -0.58
CCDC171-209ENST00000498725 A0A1W2PPC1 479 aa11.44□□□□□ -0.58
CCDC171-209ENST00000498725 TRIM75PA6NK02 468 aa11.44□□□□□ -0.58
CCDC171-209ENST00000498725 CXCL11O14625 94 aa11.44□□□□□ -0.58
CCDC171-209ENST00000498725 SLC5A1P13866 664 aa11.44□□□□□ -0.58
CCDC171-209ENST00000498725 PUM3Q15397 648 aaKnown RBP11.44□□□□□ -0.58
CCDC171-209ENST00000498725 FASTKD5Q7L8L6 764 aaKnown RBP11.44□□□□□ -0.58
CCDC171-209ENST00000498725 NECAB2Q7Z6G3 386 aa11.44□□□□□ -0.58
CCDC171-209ENST00000498725 ANKRD13CQ8N6S4 541 aa11.44□□□□□ -0.58
CCDC171-209ENST00000498725 WDR66Q8TBY9 1149 aa11.44□□□□□ -0.58
CCDC171-209ENST00000498725 SUGT1Q9Y2Z0 365 aa11.44□□□□□ -0.58
CCDC171-209ENST00000498725 RANBP2P49792 3224 aaKnown RBP11.44□□□□□ -0.58
CCDC171-209ENST00000498725 COL6A3P12111 3177 aa11.44□□□□□ -0.58
CCDC171-209ENST00000498725 A0A0G2JLL6 359 aaPredicted RBP11.43□□□□□ -0.58
CCDC171-209ENST00000498725 LDHBP07195 334 aaKnown RBP11.43□□□□□ -0.58
CCDC171-209ENST00000498725 PTPRAP18433 802 aa11.43□□□□□ -0.58
CCDC171-209ENST00000498725 RGS3P49796 1198 aa11.43□□□□□ -0.58
CCDC171-209ENST00000498725 PRRT2Q7Z6L0 340 aaPredicted RBP11.43□□□□□ -0.58
CCDC171-209ENST00000498725 SCYL3Q8IZE3 742 aa11.43□□□□□ -0.58
CCDC171-209ENST00000498725 COA7Q96BR5 231 aa11.43□□□□□ -0.58
CCDC171-209ENST00000498725 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.43□□□□□ -0.58
CCDC171-209ENST00000498725 LRRFIP2Q9Y608 721 aaKnown RBP11.43□□□□□ -0.58
CCDC171-209ENST00000498725 PLXNB2O15031 1838 aa11.42□□□□□ -0.58
CCDC171-209ENST00000498725 PHF20L1A8MW92 1017 aa11.42□□□□□ -0.58
CCDC171-209ENST00000498725 PITPNM1O00562 1244 aa11.42□□□□□ -0.58
CCDC171-209ENST00000498725 FGFR2P21802 821 aa11.42□□□□□ -0.58
CCDC171-209ENST00000498725 MNX1P50219 401 aaPredicted RBP11.42□□□□□ -0.58
CCDC171-209ENST00000498725 TRIM32Q13049 653 aa11.42□□□□□ -0.58
CCDC171-209ENST00000498725 PICALMQ13492 652 aa11.42□□□□□ -0.58
CCDC171-209ENST00000498725 RABL6Q3YEC7 729 aaPredicted RBP11.42□□□□□ -0.58
CCDC171-209ENST00000498725 WDR63Q8IWG1 891 aa11.42□□□□□ -0.58
CCDC171-209ENST00000498725 PXYLP1Q8TE99 480 aa11.42□□□□□ -0.58
CCDC171-209ENST00000498725 GDF15Q99988 308 aa11.42□□□□□ -0.58
CCDC171-209ENST00000498725 SIL1Q9H173 461 aa11.42□□□□□ -0.58
CCDC171-209ENST00000498725 PAK6Q9NQU5 681 aaPredicted RBP11.42□□□□□ -0.58
CCDC171-209ENST00000498725 AFG3L2Q9Y4W6 797 aa11.42□□□□□ -0.58
CCDC171-209ENST00000498725 FAM196BA6NMK8 535 aa11.41□□□□□ -0.58
CCDC171-209ENST00000498725 IRF5Q13568 498 aa11.41□□□□□ -0.58
CCDC171-209ENST00000498725 TREML2Q5T2D2 321 aa11.41□□□□□ -0.58
CCDC171-209ENST00000498725 CRISPLD2Q9H0B8 497 aa11.41□□□□□ -0.58
CCDC171-209ENST00000498725 LOC285556D6RIA3 1793 aa11.41□□□□□ -0.58
CCDC171-209ENST00000498725 UTYO14607 1347 aa11.4□□□□□ -0.58
CCDC171-209ENST00000498725 DDTLA6NHG4 134 aaPredicted RBP11.4□□□□□ -0.58
CCDC171-209ENST00000498725 MAGEA10P43363 369 aaPredicted RBP11.4□□□□□ -0.58
CCDC171-209ENST00000498725 SH3BP5LQ7L8J4 393 aa11.4□□□□□ -0.58
CCDC171-209ENST00000498725 LPIN2Q92539 896 aa11.4□□□□□ -0.58
CCDC171-209ENST00000498725 UBE2OQ9C0C9 1292 aaKnown RBP11.4□□□□□ -0.58
CCDC171-209ENST00000498725 MRS2Q9HD23 443 aa11.4□□□□□ -0.58
CCDC171-209ENST00000498725 ATRNL1Q5VV63 1379 aa11.4□□□□□ -0.59
CCDC171-209ENST00000498725 EYA2O00167 538 aa11.39□□□□□ -0.59
CCDC171-209ENST00000498725 BMP8BP34820 402 aa11.39□□□□□ -0.59
CCDC171-209ENST00000498725 PHKA1P46020 1223 aa11.39□□□□□ -0.59
CCDC171-209ENST00000498725 ATP2B3Q16720 1220 aa11.39□□□□□ -0.59
CCDC171-209ENST00000498725 NBPF3Q9H094 633 aa11.39□□□□□ -0.59
CCDC171-209ENST00000498725 HMX1Q9NP08 348 aaPredicted RBP11.39□□□□□ -0.59
CCDC171-209ENST00000498725 DDX4Q9NQI0 724 aaKnown RBP11.39□□□□□ -0.59
CCDC171-209ENST00000498725 MTMR10Q9NXD2 777 aa11.39□□□□□ -0.59
CCDC171-209ENST00000498725 ABCF2Q9UG63 623 aa11.39□□□□□ -0.59
CCDC171-209ENST00000498725 AGTPBP1Q9UPW5 1226 aa11.39□□□□□ -0.59
CCDC171-209ENST00000498725 KIF16BQ96L93 1317 aa11.38□□□□□ -0.59
CCDC171-209ENST00000498725 ENTPD3O75355 529 aa11.38□□□□□ -0.59
CCDC171-209ENST00000498725 HMGCRP04035 888 aa11.38□□□□□ -0.59
CCDC171-209ENST00000498725 DZIP1Q86YF9 867 aaKnown RBP11.38□□□□□ -0.59
CCDC171-209ENST00000498725 TDHQ8IZJ6 230 aa11.38□□□□□ -0.59
CCDC171-209ENST00000498725 FAM161BQ96MY7 647 aa11.38□□□□□ -0.59
CCDC171-209ENST00000498725 C11orf49Q9H6J7 331 aa11.38□□□□□ -0.59
CCDC171-209ENST00000498725 GNL3LQ9NVN8 582 aaKnown RBP11.38□□□□□ -0.59
CCDC171-209ENST00000498725 STXBP5LQ9Y2K9 1186 aa11.38□□□□□ -0.59
CCDC171-209ENST00000498725 SLC45A1Q9Y2W3 748 aa11.38□□□□□ -0.59
CCDC171-209ENST00000498725 RPTORQ8N122 1335 aa11.37□□□□□ -0.59
CCDC171-209ENST00000498725 FRMPD3Q5JV73 1810 aa11.37□□□□□ -0.59
CCDC171-209ENST00000498725 PEX10O60683 326 aa11.37□□□□□ -0.59
CCDC171-209ENST00000498725 CTNND1O60716 968 aaKnown RBP11.37□□□□□ -0.59
CCDC171-209ENST00000498725 ATXN8OSP0DMR3 200 aa11.37□□□□□ -0.59
CCDC171-209ENST00000498725 CYP2B6P20813 491 aa11.37□□□□□ -0.59
CCDC171-209ENST00000498725 ADORA1P30542 326 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms