RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 SYT10Q6XYQ8 523 aa18.95■□□□□ 0.62
COL6A1-206ENST00000498614 TBC1D10CQ8IV04 446 aa18.95■□□□□ 0.62
COL6A1-206ENST00000498614 LINC00301Q8NCQ3 95 aa18.95■□□□□ 0.62
COL6A1-206ENST00000498614 L2HGDHQ9H9P8 463 aa18.95■□□□□ 0.62
COL6A1-206ENST00000498614 ZNF532Q9HCE3 1301 aa18.94■□□□□ 0.62
COL6A1-206ENST00000498614 BIN1O00499 593 aa18.94■□□□□ 0.62
COL6A1-206ENST00000498614 TTF1Q15361 905 aaPredicted RBP18.94■□□□□ 0.62
COL6A1-206ENST00000498614 ERCC6LQ2NKX8 1250 aa18.94■□□□□ 0.62
COL6A1-206ENST00000498614 INTS5Q6P9B9 1019 aaKnown RBP18.94■□□□□ 0.62
COL6A1-206ENST00000498614 WWC3Q9ULE0 1092 aa18.94■□□□□ 0.62
COL6A1-206ENST00000498614 TRDNQ13061 729 aa18.93■□□□□ 0.62
COL6A1-206ENST00000498614 STK38Q15208 465 aa18.93■□□□□ 0.62
COL6A1-206ENST00000498614 CCDC150Q8NCX0 1101 aa18.93■□□□□ 0.62
COL6A1-206ENST00000498614 CCNL1Q9UK58 526 aaPredicted RBP18.93■□□□□ 0.62
COL6A1-206ENST00000498614 TAOK2Q9UL54 1235 aa18.93■□□□□ 0.62
COL6A1-206ENST00000498614 SF3A1Q15459 793 aaKnown RBP18.93■□□□□ 0.62
COL6A1-206ENST00000498614 CYB5R4Q7L1T6 521 aa18.93■□□□□ 0.62
COL6A1-206ENST00000498614 FBXO18Q8NFZ0 1043 aa18.93■□□□□ 0.62
COL6A1-206ENST00000498614 ZNF512BQ96KM6 892 aaPredicted RBP18.93■□□□□ 0.62
COL6A1-206ENST00000498614 BPIFA3Q9BQP9 254 aa18.93■□□□□ 0.62
COL6A1-206ENST00000498614 PDE6AP16499 860 aa18.92■□□□□ 0.62
COL6A1-206ENST00000498614 ZRSR1Q15695 479 aaKnown RBP18.92■□□□□ 0.62
COL6A1-206ENST00000498614 CCDC93Q567U6 631 aa18.92■□□□□ 0.62
COL6A1-206ENST00000498614 NHSQ6T4R5 1651 aa18.92■□□□□ 0.62
COL6A1-206ENST00000498614 SNAP23O00161 211 aa18.92■□□□□ 0.62
COL6A1-206ENST00000498614 H2AFXP16104 143 aaPredicted RBP18.92■□□□□ 0.62
COL6A1-206ENST00000498614 RXRAP19793 462 aa18.92■□□□□ 0.62
COL6A1-206ENST00000498614 SFPQP23246 707 aaKnown RBP eCLIP18.92■□□□□ 0.62
COL6A1-206ENST00000498614 NCAPHQ15003 741 aa18.92■□□□□ 0.62
COL6A1-206ENST00000498614 LRRC4BQ9NT99 713 aa18.92■□□□□ 0.62
COL6A1-206ENST00000498614 C4AP0C0L4 1744 aa18.92■□□□□ 0.62
COL6A1-206ENST00000498614 C4BP0C0L5 1744 aa18.92■□□□□ 0.62
COL6A1-206ENST00000498614 PSDA5PKW4 1024 aaPredicted RBP18.91■□□□□ 0.62
COL6A1-206ENST00000498614 KIF28PB7ZC32 967 aa18.91■□□□□ 0.62
COL6A1-206ENST00000498614 ARID4AP29374 1257 aaPredicted RBP18.91■□□□□ 0.62
COL6A1-206ENST00000498614 UBE3CQ15386 1083 aa18.91■□□□□ 0.62
COL6A1-206ENST00000498614 CCDC87Q9NVE4 849 aa18.91■□□□□ 0.62
COL6A1-206ENST00000498614 MYH14Q7Z406 1995 aaKnown RBP18.91■□□□□ 0.62
COL6A1-206ENST00000498614 IL6STP40189 918 aaPredicted RBP18.91■□□□□ 0.62
COL6A1-206ENST00000498614 PUM3Q15397 648 aaKnown RBP18.91■□□□□ 0.62
COL6A1-206ENST00000498614 TAF3Q5VWG9 929 aa18.91■□□□□ 0.62
COL6A1-206ENST00000498614 ZNF34Q8IZ26 560 aa18.91■□□□□ 0.62
COL6A1-206ENST00000498614 B4E1Z4 1266 aa18.9■□□□□ 0.62
COL6A1-206ENST00000498614 ERVV-1B6SEH8 477 aa18.9■□□□□ 0.62
COL6A1-206ENST00000498614 SLC3A2P08195 630 aaKnown RBP18.9■□□□□ 0.62
COL6A1-206ENST00000498614 NLRP12P59046 1061 aa18.9■□□□□ 0.62
COL6A1-206ENST00000498614 KCNG4Q8TDN1 519 aa18.9■□□□□ 0.62
COL6A1-206ENST00000498614 AIFM3Q96NN9 605 aa18.9■□□□□ 0.62
COL6A1-206ENST00000498614 SENP2Q9HC62 589 aa18.9■□□□□ 0.62
COL6A1-206ENST00000498614 ANGEL1Q9UNK9 670 aaKnown RBP18.9■□□□□ 0.62
COL6A1-206ENST00000498614 WDR19Q8NEZ3 1342 aa18.9■□□□□ 0.62
COL6A1-206ENST00000498614 TCRBV5S4A2TA0A5A2 114 aa18.9■□□□□ 0.62
COL6A1-206ENST00000498614 SPTLC2O15270 562 aa18.9■□□□□ 0.62
COL6A1-206ENST00000498614 UQCRFS1P1P0C7P4 283 aa18.9■□□□□ 0.62
COL6A1-206ENST00000498614 MYSM1Q5VVJ2 828 aa18.9■□□□□ 0.62
COL6A1-206ENST00000498614 LPIN2Q92539 896 aa18.9■□□□□ 0.62
COL6A1-206ENST00000498614 AIDAQ96BJ3 306 aa18.9■□□□□ 0.62
COL6A1-206ENST00000498614 INCENPQ9NQS7 918 aa18.9■□□□□ 0.62
COL6A1-206ENST00000498614 ZNF202O95125 648 aa18.89■□□□□ 0.61
COL6A1-206ENST00000498614 AMIGO3Q86WK7 504 aa18.89■□□□□ 0.61
COL6A1-206ENST00000498614 POLR3EQ9NVU0 708 aa18.89■□□□□ 0.61
COL6A1-206ENST00000498614 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.89■□□□□ 0.61
COL6A1-206ENST00000498614 ZMYM6O95789 1325 aa18.89■□□□□ 0.61
COL6A1-206ENST00000498614 SH2B2O14492 632 aaPredicted RBP18.89■□□□□ 0.61
COL6A1-206ENST00000498614 YEATS4O95619 227 aa18.89■□□□□ 0.61
COL6A1-206ENST00000498614 FGFR2P21802 821 aa18.89■□□□□ 0.61
COL6A1-206ENST00000498614 LMOD1P29536 600 aaPredicted RBP18.89■□□□□ 0.61
COL6A1-206ENST00000498614 METAP2P50579 478 aaKnown RBP eCLIP18.89■□□□□ 0.61
COL6A1-206ENST00000498614 KIF23Q02241 960 aaPredicted RBP18.89■□□□□ 0.61
COL6A1-206ENST00000498614 SUSD4Q5VX71 490 aa18.89■□□□□ 0.61
COL6A1-206ENST00000498614 ISM2Q6H9L7 571 aa18.89■□□□□ 0.61
COL6A1-206ENST00000498614 MROH5Q6ZUA9 1318 aa18.88■□□□□ 0.61
COL6A1-206ENST00000498614 APBA3O96018 575 aa18.88■□□□□ 0.61
COL6A1-206ENST00000498614 KCNJ6P48051 423 aa18.88■□□□□ 0.61
COL6A1-206ENST00000498614 BRAPQ7Z569 592 aa18.88■□□□□ 0.61
COL6A1-206ENST00000498614 STRBPQ96SI9 672 aaKnown RBP18.88■□□□□ 0.61
COL6A1-206ENST00000498614 SEC31BQ9NQW1 1179 aa18.88■□□□□ 0.61
COL6A1-206ENST00000498614 PODXL2Q9NZ53 605 aa18.88■□□□□ 0.61
COL6A1-206ENST00000498614 A0A0U1RQG5 324 aaPredicted RBP18.88■□□□□ 0.61
COL6A1-206ENST00000498614 ATP1A3P13637 1013 aa18.88■□□□□ 0.61
COL6A1-206ENST00000498614 CLCN6P51797 869 aa18.88■□□□□ 0.61
COL6A1-206ENST00000498614 FANCCQ00597 558 aa18.88■□□□□ 0.61
COL6A1-206ENST00000498614 SYNE3Q6ZMZ3 975 aa18.88■□□□□ 0.61
COL6A1-206ENST00000498614 MICU3Q86XE3 530 aa18.88■□□□□ 0.61
COL6A1-206ENST00000498614 SPATA5Q8NB90 893 aa18.88■□□□□ 0.61
COL6A1-206ENST00000498614 FHOD1Q9Y613 1164 aa18.88■□□□□ 0.61
COL6A1-206ENST00000498614 LRP5O75197 1615 aa18.87■□□□□ 0.61
COL6A1-206ENST00000498614 PFKFB1P16118 471 aa18.87■□□□□ 0.61
COL6A1-206ENST00000498614 CDC27P30260 824 aa18.87■□□□□ 0.61
COL6A1-206ENST00000498614 EIF5P55010 431 aaKnown RBP18.87■□□□□ 0.61
COL6A1-206ENST00000498614 TPM4P67936 248 aa18.87■□□□□ 0.61
COL6A1-206ENST00000498614 AXDND1Q5T1B0 1012 aaPredicted RBP18.87■□□□□ 0.61
COL6A1-206ENST00000498614 PROM2Q8N271 834 aa18.87■□□□□ 0.61
COL6A1-206ENST00000498614 MAGEB6Q8N7X4 407 aa18.87■□□□□ 0.61
COL6A1-206ENST00000498614 PHKBQ93100 1093 aa18.87■□□□□ 0.61
COL6A1-206ENST00000498614 HSD3B7Q9H2F3 369 aa18.87■□□□□ 0.61
COL6A1-206ENST00000498614 SLC5A1P13866 664 aa18.86■□□□□ 0.61
COL6A1-206ENST00000498614 RASGRF1Q13972 1273 aa18.86■□□□□ 0.61
COL6A1-206ENST00000498614 BMS1Q14692 1282 aaKnown RBP18.86■□□□□ 0.61
COL6A1-206ENST00000498614 ARHGAP29Q52LW3 1261 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms