RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 LRCH3Q96II8 777 aa15.02■□□□□ -0
THBS3-209ENST00000498500 DEFB118Q96PH6 123 aa15.02■□□□□ -0
THBS3-209ENST00000498500 STAP2Q9UGK3 403 aa15.02■□□□□ -0
THBS3-209ENST00000498500 NOB1Q9ULX3 412 aaKnown RBP15.02■□□□□ -0
THBS3-209ENST00000498500 MYH2Q9UKX2 1941 aa15.02□□□□□ -0.01
THBS3-209ENST00000498500 TNPO2O14787 897 aaKnown RBP15.01□□□□□ -0.01
THBS3-209ENST00000498500 INHAP05111 366 aa15.01□□□□□ -0.01
THBS3-209ENST00000498500 NFIAQ12857 509 aa15.01□□□□□ -0.01
THBS3-209ENST00000498500 PUM3Q15397 648 aaKnown RBP15.01□□□□□ -0.01
THBS3-209ENST00000498500 RABL6Q3YEC7 729 aaPredicted RBP15.01□□□□□ -0.01
THBS3-209ENST00000498500 GADL1Q6ZQY3 521 aa15.01□□□□□ -0.01
THBS3-209ENST00000498500 ANKRD44Q8N8A2 993 aa15.01□□□□□ -0.01
THBS3-209ENST00000498500 KLHDC4Q8TBB5 520 aa15.01□□□□□ -0.01
THBS3-209ENST00000498500 USP44Q9H0E7 712 aa15.01□□□□□ -0.01
THBS3-209ENST00000498500 TAOK2Q9UL54 1235 aa15.01□□□□□ -0.01
THBS3-209ENST00000498500 DAGLAQ9Y4D2 1042 aa15.01□□□□□ -0.01
THBS3-209ENST00000498500 ZHX2Q9Y6X8 837 aa15.01□□□□□ -0.01
THBS3-209ENST00000498500 CAPN2P17655 700 aa15□□□□□ -0.01
THBS3-209ENST00000498500 DIXDC1Q155Q3 683 aa15□□□□□ -0.01
THBS3-209ENST00000498500 PXYLP1Q8TE99 480 aa15□□□□□ -0.01
THBS3-209ENST00000498500 SMCR8Q8TEV9 937 aaPredicted RBP15□□□□□ -0.01
THBS3-209ENST00000498500 API5Q9BZZ5 524 aaKnown RBP15□□□□□ -0.01
THBS3-209ENST00000498500 PICK1Q9NRD5 415 aa15□□□□□ -0.01
THBS3-209ENST00000498500 USP40Q9NVE5 1235 aa15□□□□□ -0.01
THBS3-209ENST00000498500 A0A0G2JLL6 359 aaPredicted RBP14.99□□□□□ -0.01
THBS3-209ENST00000498500 SLC5A1P13866 664 aa14.99□□□□□ -0.01
THBS3-209ENST00000498500 FGFR2P21802 821 aa14.99□□□□□ -0.01
THBS3-209ENST00000498500 PRRT2Q7Z6L0 340 aaPredicted RBP14.99□□□□□ -0.01
THBS3-209ENST00000498500 SCYL3Q8IZE3 742 aa14.99□□□□□ -0.01
THBS3-209ENST00000498500 PAWRQ96IZ0 340 aaKnown RBP14.99□□□□□ -0.01
THBS3-209ENST00000498500 FAM198AQ9UFP1 575 aa14.99□□□□□ -0.01
THBS3-209ENST00000498500 TNNQ9UQP3 1299 aa14.99□□□□□ -0.01
THBS3-209ENST00000498500 DOCK1Q14185 1865 aa14.99□□□□□ -0.01
THBS3-209ENST00000498500 PHIPQ8WWQ0 1821 aa14.99□□□□□ -0.01
THBS3-209ENST00000498500 BCAR3O75815 825 aa14.98□□□□□ -0.01
THBS3-209ENST00000498500 ZFPM1Q8IX07 1006 aa14.98□□□□□ -0.01
THBS3-209ENST00000498500 ARHGAP45Q92619 1136 aa14.98□□□□□ -0.01
THBS3-209ENST00000498500 COA7Q96BR5 231 aa14.98□□□□□ -0.01
THBS3-209ENST00000498500 LAMA3Q16787 3333 aa14.97□□□□□ -0.01
THBS3-209ENST00000498500 LDHBP07195 334 aaKnown RBP14.97□□□□□ -0.01
THBS3-209ENST00000498500 TRIM27P14373 513 aa14.97□□□□□ -0.01
THBS3-209ENST00000498500 PTPRAP18433 802 aa14.97□□□□□ -0.01
THBS3-209ENST00000498500 PRDX5P30044 214 aa14.97□□□□□ -0.01
THBS3-209ENST00000498500 IRF5Q13568 498 aa14.97□□□□□ -0.01
THBS3-209ENST00000498500 NECAB2Q7Z6G3 386 aa14.97□□□□□ -0.01
THBS3-209ENST00000498500 ZSCAN29Q8IWY8 852 aaPredicted RBP14.97□□□□□ -0.01
THBS3-209ENST00000498500 LPIN2Q92539 896 aa14.97□□□□□ -0.01
THBS3-209ENST00000498500 PAK6Q9NQU5 681 aaPredicted RBP14.97□□□□□ -0.01
THBS3-209ENST00000498500 SLC45A1Q9Y2W3 748 aa14.97□□□□□ -0.01
THBS3-209ENST00000498500 AFG3L2Q9Y4W6 797 aa14.97□□□□□ -0.01
THBS3-209ENST00000498500 LRRFIP2Q9Y608 721 aaKnown RBP14.97□□□□□ -0.01
THBS3-209ENST00000498500 PHF20L1A8MW92 1017 aa14.96□□□□□ -0.01
THBS3-209ENST00000498500 RGS3P49796 1198 aa14.96□□□□□ -0.01
THBS3-209ENST00000498500 CRISPLD2Q9H0B8 497 aa14.96□□□□□ -0.01
THBS3-209ENST00000498500 GNL3LQ9NVN8 582 aaKnown RBP14.96□□□□□ -0.01
THBS3-209ENST00000498500 TRIM75PA6NK02 468 aa14.95□□□□□ -0.02
THBS3-209ENST00000498500 EYA2O00167 538 aa14.95□□□□□ -0.02
THBS3-209ENST00000498500 MNX1P50219 401 aaPredicted RBP14.95□□□□□ -0.02
THBS3-209ENST00000498500 C7orf61Q8IZ16 206 aa14.95□□□□□ -0.02
THBS3-209ENST00000498500 ANKRD13CQ8N6S4 541 aa14.95□□□□□ -0.02
THBS3-209ENST00000498500 DIS3LQ8TF46 1054 aaKnown RBP14.95□□□□□ -0.02
THBS3-209ENST00000498500 MEIS3Q99687 375 aa14.95□□□□□ -0.02
THBS3-209ENST00000498500 ZMYND8Q9ULU4 1186 aaPredicted RBP14.95□□□□□ -0.02
THBS3-209ENST00000498500 A0A0C4DFX4 3053 aa14.94□□□□□ -0.02
THBS3-209ENST00000498500 ENTPD3O75355 529 aa14.94□□□□□ -0.02
THBS3-209ENST00000498500 BMP8BP34820 402 aa14.94□□□□□ -0.02
THBS3-209ENST00000498500 RFX5P48382 616 aaPredicted RBP14.94□□□□□ -0.02
THBS3-209ENST00000498500 ATF7IPQ6VMQ6 1270 aa14.94□□□□□ -0.02
THBS3-209ENST00000498500 DEFB123Q8N688 67 aa14.94□□□□□ -0.02
THBS3-209ENST00000498500 GDF15Q99988 308 aa14.94□□□□□ -0.02
THBS3-209ENST00000498500 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.94□□□□□ -0.02
THBS3-209ENST00000498500 DDX60LQ5H9U9 1706 aaKnown RBP14.93□□□□□ -0.02
THBS3-209ENST00000498500 CTNND1O60716 968 aaKnown RBP14.93□□□□□ -0.02
THBS3-209ENST00000498500 UBTFL1P0CB47 393 aaPredicted RBP14.93□□□□□ -0.02
THBS3-209ENST00000498500 GPR153Q6NV75 609 aa14.93□□□□□ -0.02
THBS3-209ENST00000498500 ANKLE1Q8NAG6 615 aa14.93□□□□□ -0.02
THBS3-209ENST00000498500 IDI2Q9BXS1 227 aa14.93□□□□□ -0.02
THBS3-209ENST00000498500 PNMA3Q9UL41 463 aa14.93□□□□□ -0.02
THBS3-209ENST00000498500 DENND2AQ9ULE3 1009 aa14.93□□□□□ -0.02
THBS3-209ENST00000498500 AGTPBP1Q9UPW5 1226 aa14.93□□□□□ -0.02
THBS3-209ENST00000498500 ATAD5Q96QE3 1844 aa14.93□□□□□ -0.02
THBS3-209ENST00000498500 ATRNL1Q5VV63 1379 aa14.93□□□□□ -0.02
THBS3-209ENST00000498500 ATP2B3Q16720 1220 aa14.92□□□□□ -0.02
THBS3-209ENST00000498500 FAM110CQ1W6H9 321 aa14.92□□□□□ -0.02
THBS3-209ENST00000498500 Q7L0L9 218 aa14.92□□□□□ -0.02
THBS3-209ENST00000498500 SH3BP5LQ7L8J4 393 aa14.92□□□□□ -0.02
THBS3-209ENST00000498500 CCDC84Q86UT8 332 aaPredicted RBP14.92□□□□□ -0.02
THBS3-209ENST00000498500 FRAT1Q92837 279 aaPredicted RBP14.92□□□□□ -0.02
THBS3-209ENST00000498500 NBPF3Q9H094 633 aa14.92□□□□□ -0.02
THBS3-209ENST00000498500 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.92□□□□□ -0.02
THBS3-209ENST00000498500 SALL1Q9NSC2 1324 aa14.92□□□□□ -0.02
THBS3-209ENST00000498500 DDTLA6NHG4 134 aaPredicted RBP14.91□□□□□ -0.02
THBS3-209ENST00000498500 IPO8O15397 1037 aaKnown RBP14.91□□□□□ -0.02
THBS3-209ENST00000498500 HMGCRP04035 888 aa14.91□□□□□ -0.02
THBS3-209ENST00000498500 SLURP2P0DP57 97 aa14.91□□□□□ -0.02
THBS3-209ENST00000498500 SYN1P17600 705 aa14.91□□□□□ -0.02
THBS3-209ENST00000498500 MAP3K10Q02779 954 aa14.91□□□□□ -0.02
THBS3-209ENST00000498500 PICALMQ13492 652 aa14.91□□□□□ -0.02
THBS3-209ENST00000498500 TREML2Q5T2D2 321 aa14.91□□□□□ -0.02
THBS3-209ENST00000498500 ATG9AQ7Z3C6 839 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 474.7 ms